annotate tool_dependencies.xml @ 0:d9c1f2133124 draft

Uploaded initial version 0.4.4.

<?xml version="1.0"?>
<tool_dependency>
  <package name="python_xlwt" version="0.7.5">
    <install version="1.0">
      <actions>
	<action type="download_by_url">https://pypi.python.org/packages/source/x/xlwt/xlwt-0.7.5.tar.gz</action>
        <action type="make_directory">$INSTALL_DIR/lib/python</action>
        <action type="shell_command">
          export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
          python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
        </action>
        <action type="set_environment">
          <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
        </action>
      </actions>
    </install>
    <readme>Installs Python module xlwt 0.7.5</readme>
  </package>
  <package name="python_xlrd" version="0.9.3">
    <install version="1.0">
      <actions>
	<action type="download_by_url">https://pypi.python.org/packages/source/x/xlrd/xlrd-0.9.3.tar.gz</action>
        <action type="make_directory">$INSTALL_DIR/lib/python</action>
        <action type="shell_command">
          export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
          python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
        </action>
        <action type="set_environment">
          <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
        </action>
      </actions>
    </install>
    <readme>Installs Python module xlrd 0.9.3</readme>
  </package>
  <package name="python_xlutils" version="1.7.1">
    <install version="1.0">
      <actions>
	<action type="download_by_url">https://pypi.python.org/packages/source/x/xlutils/xlutils-1.7.1.tar.gz</action>
        <action type="make_directory">$INSTALL_DIR/lib/python</action>
        <action type="shell_command">
          export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
          python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
        </action>
        <action type="set_environment">
          <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
        </action>
      </actions>
    </install>
    <readme>Installs Python module xlutils 1.7.1</readme>
  </package>
  <package name="rnachipintegrator" version="0.4.4">
    <install version="1.0">
      <actions>
	<action type="download_by_url">https://github.com/fls-bioinformatics-core/RnaChipIntegrator/archive/v0.4.4.tar.gz</action>
	<action type="move_file">
	  <source>RnaChipIntegrator.py</source>
	  <destination>$INSTALL_DIR</destination>
	</action>
	<action type="move_file">
	  <source>Spreadsheet.py</source>
	  <destination>$INSTALL_DIR</destination>
	</action>
        <action type="set_environment">
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
          <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
	</action>
      </actions>
    </install>
    <readme>Installs RnaChipIntegrator 0.4.3</readme>
  </package>
</tool_dependency>