Mercurial > repos > pjbriggs > rnachipintegrator
comparison rnachipintegrator_macros.xml @ 6:466c68008537 draft default tip
Updated for RnaChipIntegrator 3.0.0.
author | pjbriggs |
---|---|
date | Wed, 20 Mar 2024 09:11:04 +0000 |
parents | 087d9872fb0d |
children |
comparison
equal
deleted
inserted
replaced
5:087d9872fb0d | 6:466c68008537 |
---|---|
1 <macros> | 1 <macros> |
2 <token name="@VERSION@">1.1.0.0</token> | 2 <token name="@VERSION@">3.0.0+galaxy0</token> |
3 <xml name="requirements"> | 3 <xml name="requirements"> |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="2.7">python</requirement> | 5 <requirement type="package" version="3.9">python</requirement> |
6 <requirement type="package" version="1.1.0">rnachipintegrator</requirement> | 6 <requirement type="package" version="3.0.0">rnachipintegrator</requirement> |
7 </requirements> | 7 </requirements> |
8 </xml> | 8 </xml> |
9 <xml name="version_command"> | 9 <xml name="version_command"> |
10 <version_command>RnaChipIntegrator --version</version_command> | 10 <version_command>RnaChipIntegrator --version</version_command> |
11 </xml> | 11 </xml> |
24 label="End of promoter region with respect to gene TSS" /> | 24 label="End of promoter region with respect to gene TSS" /> |
25 <param name="edge" type="select" | 25 <param name="edge" type="select" |
26 label="Gene 'edges' to consider in distance calculations" | 26 label="Gene 'edges' to consider in distance calculations" |
27 help="(--edge)"> | 27 help="(--edge)"> |
28 <option value="tss" selected="true">TSS only</option> | 28 <option value="tss" selected="true">TSS only</option> |
29 <option value="tes" selected="true">TES only</option> | |
29 <option value="both">Nearest of TSS or TES</option> | 30 <option value="both">Nearest of TSS or TES</option> |
30 </param> | 31 </param> |
31 </xml> | 32 </xml> |
32 <xml name="output_options"> | 33 <xml name="output_options"> |
33 <conditional name="output"> | 34 <conditional name="output"> |