Mercurial > repos > pjbriggs > rnachipintegrator

diff rnachipintegrator_canonical_genes.xml @ 6:466c68008537 draft default tip

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Updated for RnaChipIntegrator 3.0.0.
author pjbriggs
date Wed, 20 Mar 2024 09:11:04 +0000
parents b695071de766
children
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--- a/rnachipintegrator_canonical_genes.xml	Tue Aug 07 06:57:35 2018 -0400
+++ b/rnachipintegrator_canonical_genes.xml	Wed Mar 20 09:11:04 2024 +0000
@@ -5,8 +5,8 @@
   </macros>
   <expand macro="requirements" />
   <expand macro="version_command" />
-  <command interpreter="bash"><![CDATA[
-  rnachipintegrator_wrapper.sh
+  <command detect_errors="aggressive"><![CDATA[
+  bash $__tool_directory__/rnachipintegrator_wrapper.sh
   #if $peaks_in.metadata.chromCol
     --peak_cols=${peaks_in.metadata.chromCol},${peaks_in.metadata.startCol},${peaks_in.metadata.endCol}
   #end if