Mercurial > repos > pjbriggs > rnachipintegrator
view test-data/features_per_peak6.summary @ 2:dc498b03ca9a draft
Uploaded version 1.0.2.0.
| author | pjbriggs |
|---|---|
| date | Thu, 01 Sep 2016 04:47:28 -0400 |
| parents | |
| children |
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#peak.chr peak.start peak.end gene.id strand TSS TES dist_closest dist_TSS dist_TES direction overlap_gene overlap_promoter chr1 10617233 10617437 NM_177834_Cpa6 - 10710026 10314801 0 92589 302432 . 1 0 chr1 108747519 108747791 NM_009190_Vps4b - 108739123 108665873 8396 8396 81646 U 0 0 chr1 120760212 120760461 NM_023755_Tcfcp2l1 + 120524515 120655075 105137 235697 105137 D 0 0 chr1 132950929 132951247 NM_010548_Il10 + 132916424 132921547 29382 34505 29382 D 0 0 chr1 133114860 133115015 NM_018750_Rassf5 - 133144761 133072991 0 29746 41869 . 1 0 chr1 135582677 135582828 NM_001159649_Lax1 - 135586665 135575626 0 3837 7051 . 1 0 chr1 135851853 135852218 NM_054077_Prelp - 135865173 135806855 0 12955 44998 . 1 0 chr1 136956468 136956598 NM_007955_Ptprv - 137029151 137004306 47708 72553 47708 D 0 0 chr1 13829227 13829564 NM_001011873_Xkr9 + 13658862 13691794 137433 170365 137433 D 0 0 chr1 138437726 138437860 NM_177643_Zfp281 + 138487073 138526617 49213 49213 88757 U 0 0 chr1 140381656 140381785 NM_021605_Nek7 - 140516775 140379472 0 134990 2184 . 1 0 chr1 145591041 145591176 NM_001038592_Glrx2 + 145585774 145608282 0 5267 17106 . 1 0 chr1 154971572 154971673 NM_008485_Lamc2 - 155033557 154969890 0 61884 1682 . 1 0 chr1 155123313 155123435 NM_010683_Lamc1 - 155179906 155065803 0 56471 57510 . 1 0 chr1 158510523 158510813 NM_009230_Soat1 - 158417632 158354679 92891 92891 155844 U 0 0 chr1 158537267 158537411 NM_023141_Tor3a - 158604477 158583760 46349 67066 46349 D 0 0 chr1 158580638 158580759 NM_023141_Tor3a - 158604477 158583760 3001 23718 3001 D 0 0 chr1 158835251 158835391 NM_028333_Angptl1 + 158769061 158791209 44042 66190 44042 D 0 0 chr1 159240736 159240866 BC055845_2810025M15Rik + 159342483 159350353 101617 101617 109487 U 0 0 chr1 163827897 163828062 NM_026078_Pigc + 163860747 163957217 32685 32685 129155 U 0 0 chr1 164215623 164215935 NR_002870_Dnm3os + 164119785 164155671 59952 95838 59952 D 0 0 chr1 167222964 167223261 NM_145513_Tiprl - 167183116 167133855 39848 39848 89109 U 0 0 chr1 167906284 167906554 NM_198934_Pou2f1 - 167932753 167804181 0 26199 102103 . 1 0 chr1 170255081 170255260 NM_183355_Pbx1 - 170512777 170049495 0 257517 205586 . 1 0 chr1 17030405 17030545 NM_020604_Jph1 - 17087942 16837549 0 57397 192856 . 1 0 chr1 172620779 172620912 NM_177068_Olfml2b + 172569075 172612915 7864 51704 7864 D 0 0 chr1 172620917 172621080 NM_177068_Olfml2b + 172569075 172612915 8002 51842 8002 D 0 0 chr1 174376470 174376659 NM_029612_Slamf9 + 174392516 174408706 15857 15857 32047 U 0 0 chr1 181061299 181061446 NM_177757_Kif26b + 180720593 180862983 198316 340706 198316 D 0 0 chr1 182479646 182479905 NM_007415_Parp1 + 182499033 182531385 19128 19128 51480 U 0 0 chr1 185854947 185855105 NM_022019_Dusp10 + 185755009 185899515 0 99938 44410 . 1 0 chr1 194258648 194259032 NM_010600_Kcnh1 + 194014507 194368391 0 244141 109359 . 1 0 chr1 194645118 194645475 NM_144881_Hhat - 194649833 194320603 0 4358 324515 . 1 0 chr1 194957396 194957723 NM_145415_AA408296 - 194956446 194918802 950 950 38594 U 0 1 chr1 195324443 195324741 NM_144817_Camk1g - 195216632 195172540 107811 107811 151903 U 0 0 chr1 195330701 195330930 NM_144817_Camk1g - 195216632 195172540 114069 114069 158161 U 0 0 chr1 195338316 195338616 NM_144817_Camk1g - 195216632 195172540 121684 121684 165776 U 0 0 chr1 195342728 195342985 NM_144817_Camk1g - 195216632 195172540 126096 126096 170188 U 0 0 chr1 195384767 195385195 NM_144817_Camk1g - 195216632 195172540 168135 168135 212227 U 0 0 chr1 197057796 197057843 NM_007758_Cr2 - 197003002 196963005 54794 54794 94791 U 0 0 chr1 24609562 24609623 NM_007733_Col19a1 - 24602262 24258667 7300 7300 350895 U 0 0 chr1 24609923 24609992 NM_007733_Col19a1 - 24602262 24258667 7661 7661 351256 U 0 0 chr1 24730996 24731077 NM_026719_Lmbrd1 + 24820582 24823143 89505 89505 92066 U 0 0 chr1 26734195 26734485 NM_175642_Bai3 - 25887514 25084207 846681 846681 1649988 U 0 0 chr1 34206924 34207100 NM_134448_Dst + 33965107 34411632 0 241817 204532 . 1 0 chr1 36106813 36107058 NM_015818_Hs6st1 + 36125255 36163289 18197 18197 56231 U 0 0 chr1 39492140 39492513 NM_018775_Tbc1d8 - 39544345 39428350 0 51832 63790 . 1 0 chr1 40325917 40326123 NM_008362_Il1r1 + 40274145 40373439 0 51772 47316 . 1 0 chr1 44195449 44195639 NM_011729_Ercc5 + 44204270 44256568 8631 8631 60929 U 0 0 chr1 52625416 52625560 NM_008667_Nab1 - 52611216 52487127 14200 14200 138289 U 0 0 chr1 54631692 54631815 ENSMUST00000094950_Pgap1 - 54614539 54529849 17153 17153 101843 U 0 0 chr1 55283572 55283675 NM_028713_Rftn2 - 55283748 55227030 0 73 56542 . 1 1 chr1 63664888 63665018 NM_011780_Adam23 + 63640970 63642850 22038 23918 22038 D 0 0 chr1 72769824 72770056 NM_176980_Ankar - 72747143 72689581 22681 22681 80243 U 0 0 chr1 72770058 72770226 NM_176980_Ankar - 72747143 72689581 22915 22915 80477 U 0 0 chr1 72815517 72815742 NM_008342_Igfbp2 + 72840313 72899038 24571 24571 83296 U 0 0 chr1 75481920 75482054 NM_001001565_Chpf - 75476437 75470923 5483 5483 10997 U 0 0 chr1 77457642 77457791 NM_007936_Epha4 - 77511653 77280640 0 53862 177002 . 1 0 chr1 78630893 78631160 NM_028817_Acsl3 + 78654388 78743434 23228 23228 112274 U 0 0 chr1 88408969 88409267 NM_172974_Cops7b + 88478926 88503950 69659 69659 94683 U 0 0 chr1 89989553 89989714 NM_201641_Ugt1a10 + 89922380 90115570 0 67173 125856 . 1 0 chr1 90412932 90413132 NM_008132_Glrp1 - 90406631 90396446 6301 6301 16486 U 0 0 chr1 90592499 90592629 NM_177305_Arl4c - 90617572 90569702 0 24943 22797 . 1 0 chr1 91496003 91496145 NM_178119_Agap1 + 91351421 91791845 0 144582 295700 . 1 0 chr1 91496155 91496319 NM_178119_Agap1 + 91351421 91791845 0 144734 295526 . 1 0 chr1 92070253 92070431 NM_007722_Cxcr7 + 92100063 92112863 29632 29632 42432 U 0 0 chr1 95186508 95186637 NM_178051_Mterfd2 - 95202630 95195779 9142 15993 9142 D 0 0 chr1 9619046 9619167 NM_178399_3110035E14Rik + 9591248 9617222 1824 27798 1824 D 0 0 chr1 9619175 9619382 NM_178399_3110035E14Rik + 9591248 9617222 1953 27927 1953 D 0 0