Mercurial > repos > pjbriggs > rnachipintegrator
changeset 2:dc498b03ca9a draft
Uploaded version 1.0.2.0.
| author | pjbriggs |
|---|---|
| date | Thu, 01 Sep 2016 04:47:28 -0400 |
| parents | 5f69a2c1b9c9 |
| children | 7a8df77d1046 |
| files | README.rst rnachipintegrator_macros.xml rnachipintegrator_wrapper.xml test-data/features_per_peak6.out test-data/features_per_peak6.summary test-data/peaks6.xlsx test-data/peaks_per_feature6.out test-data/peaks_per_feature6.summary tool_dependencies.xml |
| diffstat | 9 files changed, 5156 insertions(+), 5 deletions(-) [+] |
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--- a/README.rst Wed Feb 24 09:39:14 2016 -0500 +++ b/README.rst Thu Sep 01 04:47:28 2016 -0400 @@ -104,6 +104,8 @@ ========== ====================================================================== Version Changes ---------- ---------------------------------------------------------------------- +1.0.2.0 - Update to ``RnaChipIntegrator`` version 1.0.2 (fixes bug with + zero or blank cutoff) 1.0.0.0 - Update to use latest ``RnaChipIntegrator`` version 1.0.0. 0.5.0-0 - Significant update to bring tools in line with ``RnaChipIntegrator`` version 0.5.0, including removing the
--- a/rnachipintegrator_macros.xml Wed Feb 24 09:39:14 2016 -0500 +++ b/rnachipintegrator_macros.xml Thu Sep 01 04:47:28 2016 -0400 @@ -1,9 +1,9 @@ <macros> - <token name="@VERSION@">1.0.0</token> + <token name="@VERSION@">1.0.2</token> <xml name="requirements"> <requirements> <requirement type="package" version="0.8.4">python_xlsxwriter</requirement> - <requirement type="package" version="1.0.0">rnachipintegrator</requirement> + <requirement type="package" version="1.0.2">rnachipintegrator</requirement> </requirements> </xml> <xml name="version_command">
--- a/rnachipintegrator_wrapper.xml Wed Feb 24 09:39:14 2016 -0500 +++ b/rnachipintegrator_wrapper.xml Thu Sep 01 04:47:28 2016 -0400 @@ -146,6 +146,26 @@ <output name="features_per_peak_summary" ftype="tabular" file="features_per_peak4.summary" /> </test> + <!-- + RnaChipIntegrator +name=test +cutoff=0 +promoter_region=-10000,2500 +xlsx +summary features.txt peaks.txt + --> + <test> + <param name="features_in" value="features.txt" ftype="tabular" /> + <param name="peaks_in" value="peaks.txt" ftype="tabular" /> + <param name="cutoff" value="" /> + <param name="compact_format" value="false" /> + <param name="summary" value="true" /> + <param name="pad_output" value="true" /> + <output name="xlsx_out" file="peaks6.xlsx" compare="sim_size" /> + <output name="peaks_per_feature_out" ftype="tabular" + file="peaks_per_feature6.out" /> + <output name="features_per_peak_out" ftype="tabular" + file="features_per_peak6.out" /> + <output name="peaks_per_feature_summary" ftype="tabular" + file="peaks_per_feature6.summary" /> + <output name="features_per_peak_summary" ftype="tabular" + file="features_per_peak6.summary" /> + </test> </tests> <help>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/features_per_peak6.out Thu Sep 01 04:47:28 2016 -0400 @@ -0,0 +1,277 @@ +#peak.chr peak.start peak.end gene.id strand TSS TES dist_closest dist_TSS dist_TES direction overlap_gene overlap_promoter +chr1 10617233 10617437 NM_177834_Cpa6 - 10710026 10314801 0 92589 302432 . 1 0 +chr1 10617233 10617437 NM_013715_Cops5 - 10028315 10014683 588918 588918 602550 U 0 0 +chr1 10617233 10617437 NM_026493_Cspp1 + 10028093 10126849 490384 589140 490384 D 0 0 +chr1 10617233 10617437 NM_145692_Lrrc67 - 9999420 9943781 617813 617813 673452 U 0 0 +chr1 108747519 108747791 NM_009190_Vps4b - 108739123 108665873 8396 8396 81646 U 0 0 +chr1 108747519 108747791 NM_009257_Serpinb5 + 108757652 108779925 9861 9861 32134 U 0 0 +chr1 108747519 108747791 NM_027971_Serpinb12 + 108831026 108853655 83235 83235 105864 U 0 0 +chr1 108747519 108747791 NM_027534_Kdsr - 108656357 108617007 91162 91162 130512 U 0 0 +chr1 120760212 120760461 NM_023755_Tcfcp2l1 + 120524515 120655075 105137 235697 105137 D 0 0 +chr1 120760212 120760461 NM_026472_Mki67ip + 120218436 120230401 529811 541776 529811 D 0 0 +chr1 120760212 120760461 NM_011650_Tsn - 120208016 120194658 552196 552196 565554 U 0 0 +chr1 120760212 120760461 NM_146103_Tmem185b + 121396063 121425550 635602 635602 665089 U 0 0 +chr1 132950929 132951247 NM_010548_Il10 + 132916424 132921547 29382 34505 29382 D 0 0 +chr1 132950929 132951247 NM_001009940_Il19 - 132915234 132786042 35695 35695 164887 U 0 0 +chr1 132950929 132951247 NM_008551_Mapkapk2 - 133013820 132950274 0 62573 655 . 1 0 +chr1 132950929 132951247 NM_145508_Dyrk3 - 133034897 133018921 67674 83650 67674 D 0 0 +chr1 133114860 133115015 NM_018750_Rassf5 - 133144761 133072991 0 29746 41869 . 1 0 +chr1 133114860 133115015 NM_019777_Ikbke - 133176163 133151052 36037 61148 36037 D 0 0 +chr1 133114860 133115015 NM_001136070_Lgtn + 133049773 133084235 30625 65087 30625 D 0 0 +chr1 133114860 133115015 NM_145508_Dyrk3 - 133034897 133018921 79963 79963 95939 U 0 0 +chr1 135582677 135582828 NM_001159649_Lax1 - 135586665 135575626 0 3837 7051 . 1 0 +chr1 135582677 135582828 NM_144530_Zc3h11a - 135557956 135516445 24721 24721 66232 U 0 0 +chr1 135582677 135582828 NM_213616_Atp2b4 - 135697538 135602265 19437 114710 19437 D 0 0 +chr1 135582677 135582828 NM_011439_Sox13 - 135384763 135278853 197914 197914 303824 U 0 0 +chr1 135851853 135852218 NM_054077_Prelp - 135865173 135806855 0 12955 44998 . 1 0 +chr1 135851853 135852218 NM_054076_Optc - 135805299 135787973 46554 46554 63880 U 0 0 +chr1 135851853 135852218 NM_007570_Btg2 - 135991759 135971251 119033 139541 119033 D 0 0 +chr1 135851853 135852218 NM_213616_Atp2b4 - 135697538 135602265 154315 154315 249588 U 0 0 +chr1 136956468 136956598 NM_007955_Ptprv - 137029151 137004306 47708 72553 47708 D 0 0 +chr1 136956468 136956598 NM_026823_Arl8a + 137043216 137053347 86618 86618 96749 U 0 0 +chr1 136956468 136956598 NM_026024_Ube2t + 136857731 136870739 85729 98737 85729 D 0 0 +chr1 136956468 136956598 NM_134438_Gpr37l1 - 137069087 137054243 97645 112489 97645 D 0 0 +chr1 13829227 13829564 NM_001011873_Xkr9 + 13658862 13691794 137433 170365 137433 D 0 0 +chr1 13829227 13829564 NM_145381_Lactb2 - 13650616 13604244 178611 178611 224983 U 0 0 +chr1 13829227 13829564 NM_028173_Tram1 - 13579965 13554779 249262 249262 274448 U 0 0 +chr1 13829227 13829564 NM_008678_Ncoa2 - 13399268 13129206 429959 429959 700021 U 0 0 +chr1 138437726 138437860 NM_177643_Zfp281 + 138487073 138526617 49213 49213 88757 U 0 0 +chr1 138437726 138437860 NM_026500_Ddx59 + 138242798 138336799 100927 194928 100927 D 0 0 +chr1 138437726 138437860 BC053100_5730559C18Rik - 138130841 138110108 306885 306885 327618 U 0 0 +chr1 138437726 138437860 NM_001039472_Kif21b + 138027986 138074578 363148 409740 363148 D 0 0 +chr1 140381656 140381785 NM_021605_Nek7 - 140516775 140379472 0 134990 2184 . 1 0 +chr1 140381656 140381785 NM_177397_Atp6v1g3 + 140120875 140186039 195617 260781 195617 D 0 0 +chr1 140381656 140381785 NM_001111316_Ptprc - 140088994 139959456 292662 292662 422200 U 0 0 +chr1 140381656 140381785 NM_001025565_Lhx9 - 140740509 140694768 312983 358724 312983 D 0 0 +chr1 145591041 145591176 NM_001038592_Glrx2 + 145585774 145608282 0 5267 17106 . 1 0 +chr1 145591041 145591176 NM_019562_Uchl5 + 145623774 145654586 32598 32598 63410 U 0 0 +chr1 145591041 145591176 NM_013835_Trove2 - 145624178 145597816 6640 33002 6640 D 0 0 +chr1 145591041 145591176 NM_145991_Cdc73 - 145549936 145274292 41105 41105 316749 U 0 0 +chr1 154971572 154971673 NM_008485_Lamc2 - 155033557 154969890 0 61884 1682 . 1 0 +chr1 154971572 154971673 NM_175460_Nmnat2 + 154802128 154966391 5181 169444 5181 D 0 0 +chr1 154971572 154971673 NM_010683_Lamc1 - 155179906 155065803 94130 208233 94130 D 0 0 +chr1 154971572 154971673 NM_001005507_Smg7 - 154750410 154684125 221162 221162 287447 U 0 0 +chr1 155123313 155123435 NM_010683_Lamc1 - 155179906 155065803 0 56471 57510 . 1 0 +chr1 155123313 155123435 NM_008485_Lamc2 - 155033557 154969890 89756 89756 153423 U 0 0 +chr1 155123313 155123435 NM_007842_Dhx9 - 155334755 155302618 179183 211320 179183 D 0 0 +chr1 155123313 155123435 NM_028749_Npl - 155424001 155350145 226710 300566 226710 D 0 0 +chr1 158510523 158510813 NM_009230_Soat1 - 158417632 158354679 92891 92891 155844 U 0 0 +chr1 158510523 158510813 NM_023141_Tor3a - 158604477 158583760 72947 93664 72947 D 0 0 +chr1 158510523 158510813 NM_145413_Fam20b - 158649180 158608676 97863 138367 97863 D 0 0 +chr1 158510523 158510813 NM_028333_Angptl1 + 158769061 158791209 258248 258248 280396 U 0 0 +chr1 158537267 158537411 NM_023141_Tor3a - 158604477 158583760 46349 67066 46349 D 0 0 +chr1 158537267 158537411 NM_145413_Fam20b - 158649180 158608676 71265 111769 71265 D 0 0 +chr1 158537267 158537411 NM_009230_Soat1 - 158417632 158354679 119635 119635 182588 U 0 0 +chr1 158537267 158537411 NM_028333_Angptl1 + 158769061 158791209 231650 231650 253798 U 0 0 +chr1 158580638 158580759 NM_023141_Tor3a - 158604477 158583760 3001 23718 3001 D 0 0 +chr1 158580638 158580759 NM_145413_Fam20b - 158649180 158608676 27917 68421 27917 D 0 0 +chr1 158580638 158580759 NM_009230_Soat1 - 158417632 158354679 163006 163006 225959 U 0 0 +chr1 158580638 158580759 NM_028333_Angptl1 + 158769061 158791209 188302 188302 210450 U 0 0 +chr1 158835251 158835391 NM_028333_Angptl1 + 158769061 158791209 44042 66190 44042 D 0 0 +chr1 158835251 158835391 NM_023884_Ralgps2 - 158969600 158734300 0 134209 100951 . 1 0 +chr1 158835251 158835391 NM_145413_Fam20b - 158649180 158608676 186071 186071 226575 U 0 0 +chr1 158835251 158835391 NM_023141_Tor3a - 158604477 158583760 230774 230774 251491 U 0 0 +chr1 159240736 159240866 BC055845_2810025M15Rik + 159342483 159350353 101617 101617 109487 U 0 0 +chr1 159240736 159240866 NM_023884_Ralgps2 - 158969600 158734300 271136 271136 506436 U 0 0 +chr1 159240736 159240866 NM_028333_Angptl1 + 158769061 158791209 449527 471675 449527 D 0 0 +chr1 159240736 159240866 NM_145413_Fam20b - 158649180 158608676 591556 591556 632060 U 0 0 +chr1 163827897 163828062 NM_026078_Pigc + 163860747 163957217 32685 32685 129155 U 0 0 +chr1 163827897 163828062 NM_010177_Fasl - 163718844 163710820 109053 109053 117077 U 0 0 +chr1 163827897 163828062 NR_002870_Dnm3os + 164119785 164155671 291723 291723 327609 U 0 0 +chr1 163827897 163828062 NM_183391_Tnfsf18 + 163373523 163524094 303803 454374 303803 D 0 0 +chr1 164215623 164215935 NR_002870_Dnm3os + 164119785 164155671 59952 95838 59952 D 0 0 +chr1 164215623 164215935 NM_001038619_Dnm3 - 164408155 163902671 0 192220 312952 . 1 0 +chr1 164215623 164215935 NM_144877_Mettl13 - 164478659 164462268 246333 262724 246333 D 0 0 +chr1 164215623 164215935 NM_016796_Vamp4 + 164500371 164532593 284436 284436 316658 U 0 0 +chr1 167222964 167223261 NM_145513_Tiprl - 167183116 167133855 39848 39848 89109 U 0 0 +chr1 167222964 167223261 NM_145512_Sft2d2 - 167124549 167104119 98415 98415 118845 U 0 0 +chr1 167222964 167223261 NM_032005_Tbx19 - 167090894 167056323 132070 132070 166641 U 0 0 +chr1 167222964 167223261 NM_027430_Brp44 + 167390752 167411345 167491 167491 188084 U 0 0 +chr1 167906284 167906554 NM_198934_Pou2f1 - 167932753 167804181 0 26199 102103 . 1 0 +chr1 167906284 167906554 NM_021610_Gpa33 + 168060559 168118074 154005 154005 211520 U 0 0 +chr1 167906284 167906554 NM_001113394_Cd247 + 167711216 167807397 98887 195068 98887 D 0 0 +chr1 167906284 167906554 NM_011804_Creg1 + 167693878 167710825 195459 212406 195459 D 0 0 +chr1 170255081 170255260 NM_183355_Pbx1 - 170512777 170049495 0 257517 205586 . 1 0 +chr1 170255081 170255260 NM_033652_Lmx1a + 169579767 169778872 476209 675314 476209 D 0 0 +chr1 170255081 170255260 NM_009107_Rxrg + 169399669 169569753 685328 855412 685328 D 0 0 +chr1 170255081 170255260 NM_001013382_Lrrc52 - 169397136 169375806 857945 857945 879275 U 0 0 +chr1 17030405 17030545 NM_020604_Jph1 - 17087942 16837549 0 57397 192856 . 1 0 +chr1 17030405 17030545 NM_010267_Gdap1 + 17135463 17385513 104918 104918 354968 U 0 0 +chr1 17030405 17030545 NM_023434_Tox4 - 16760219 16757104 270186 270186 273301 U 0 0 +chr1 17030405 17030545 NM_016923_Ly96 + 16678152 16699618 330787 352253 330787 D 0 0 +chr1 172620779 172620912 NM_177068_Olfml2b + 172569075 172612915 7864 51704 7864 D 0 0 +chr1 172620779 172620912 NM_023173_Dusp12 - 172815650 172803629 182717 194738 182717 D 0 0 +chr1 172620779 172620912 NM_001029984_Fcrlb - 172843072 172836813 215901 222160 215901 D 0 0 +chr1 172620779 172620912 NM_145141_Fcrla - 172857714 172847725 226813 236802 226813 D 0 0 +chr1 172620917 172621080 NM_177068_Olfml2b + 172569075 172612915 8002 51842 8002 D 0 0 +chr1 172620917 172621080 NM_023173_Dusp12 - 172815650 172803629 182549 194570 182549 D 0 0 +chr1 172620917 172621080 NM_001029984_Fcrlb - 172843072 172836813 215733 221992 215733 D 0 0 +chr1 172620917 172621080 NM_145141_Fcrla - 172857714 172847725 226645 236634 226645 D 0 0 +chr1 174376470 174376659 NM_029612_Slamf9 + 174392516 174408706 15857 15857 32047 U 0 0 +chr1 174376470 174376659 NM_033608_Igsf9 + 174411686 174429005 35027 35027 52346 U 0 0 +chr1 174376470 174376659 NM_178598_Tagln2 + 174430123 174475991 53464 53464 99332 U 0 0 +chr1 174376470 174376659 NM_026234_Pigm + 174306609 174314210 62260 69861 62260 D 0 0 +chr1 181061299 181061446 NM_177757_Kif26b + 180720593 180862983 198316 340706 198316 D 0 0 +chr1 181061299 181061446 NM_027188_Smyd3 - 181448168 180885172 0 386722 176127 . 1 0 +chr1 181061299 181061446 BC054802_9630058J23Rik + 181476521 181558044 415075 415075 496598 U 0 0 +chr1 181061299 181061446 NM_178653_Sccpdh + 181598088 181617593 536642 536642 556147 U 0 0 +chr1 182479646 182479905 NM_007415_Parp1 + 182499033 182531385 19128 19128 51480 U 0 0 +chr1 182479646 182479905 NM_001103182_Lin9 + 182572002 182620816 92097 92097 140911 U 0 0 +chr1 182479646 182479905 NM_013729_Mixl1 - 182634680 182623184 143279 154775 143279 D 0 0 +chr1 182479646 182479905 NM_133225_Acbd3 + 182654006 182684317 174101 174101 204412 U 0 0 +chr1 185854947 185855105 NM_022019_Dusp10 + 185755009 185899515 0 99938 44410 . 1 0 +chr1 185854947 185855105 NM_008250_Hlx - 186592227 186542564 687459 737122 687459 D 0 0 +chr1 185854947 185855105 NM_001081361_Mosc1 - 186635172 186610666 755561 780067 755561 D 0 0 +chr1 185854947 185855105 NM_133684_Mosc2 - 186687141 186636947 781842 832036 781842 D 0 0 +chr1 194258648 194259032 NM_010600_Kcnh1 + 194014507 194368391 0 244141 109359 . 1 0 +chr1 194258648 194259032 NM_144814_Rcor3 - 193962565 193910981 296083 296083 347667 U 0 0 +chr1 194258648 194259032 NM_011633_Traf5 - 193916369 193821096 342279 342279 437552 U 0 0 +chr1 194258648 194259032 NM_181796_Gstp2 - 193905509 193897651 353139 353139 360997 U 0 0 +chr1 194645118 194645475 NM_144881_Hhat - 194649833 194320603 0 4358 324515 . 1 0 +chr1 194645118 194645475 ENSMUST00000057543_A730013G03Rik - 194661397 194659323 13848 15922 13848 D 0 0 +chr1 194645118 194645475 NM_198247_Sertad4 - 194693726 194670313 24838 48251 24838 D 0 0 +chr1 194645118 194645475 NM_181546_Syt14 - 194861959 194713536 68061 216484 68061 D 0 0 +chr1 194957396 194957723 NM_145415_AA408296 - 194956446 194918802 950 950 38594 U 0 1 +chr1 194957396 194957723 NM_016851_Irf6 + 194979326 194998230 21603 21603 40507 U 0 0 +chr1 194957396 194957723 BC055955_A130010J15Rik + 194999663 195004015 41940 41940 46292 U 0 0 +chr1 194957396 194957723 NM_153137_Traf3ip3 - 195027877 195001656 43933 70154 43933 D 0 0 +chr1 195324443 195324741 NM_144817_Camk1g - 195216632 195172540 107811 107811 151903 U 0 0 +chr1 195324443 195324741 NM_008059_G0s2 - 195108977 195098362 215466 215466 226081 U 0 0 +chr1 195324443 195324741 NM_008288_Hsd11b1 - 195090228 195047814 234215 234215 276629 U 0 0 +chr1 195324443 195324741 NM_008484_Lamb3 + 195033913 195170047 154396 290530 154396 D 0 0 +chr1 195330701 195330930 NM_144817_Camk1g - 195216632 195172540 114069 114069 158161 U 0 0 +chr1 195330701 195330930 NM_008059_G0s2 - 195108977 195098362 221724 221724 232339 U 0 0 +chr1 195330701 195330930 NM_008288_Hsd11b1 - 195090228 195047814 240473 240473 282887 U 0 0 +chr1 195330701 195330930 NM_008484_Lamb3 + 195033913 195170047 160654 296788 160654 D 0 0 +chr1 195338316 195338616 NM_144817_Camk1g - 195216632 195172540 121684 121684 165776 U 0 0 +chr1 195338316 195338616 NM_008059_G0s2 - 195108977 195098362 229339 229339 239954 U 0 0 +chr1 195338316 195338616 NM_008288_Hsd11b1 - 195090228 195047814 248088 248088 290502 U 0 0 +chr1 195338316 195338616 NM_008484_Lamb3 + 195033913 195170047 168269 304403 168269 D 0 0 +chr1 195342728 195342985 NM_144817_Camk1g - 195216632 195172540 126096 126096 170188 U 0 0 +chr1 195342728 195342985 NM_008059_G0s2 - 195108977 195098362 233751 233751 244366 U 0 0 +chr1 195342728 195342985 NM_008288_Hsd11b1 - 195090228 195047814 252500 252500 294914 U 0 0 +chr1 195342728 195342985 NM_008484_Lamb3 + 195033913 195170047 172681 308815 172681 D 0 0 +chr1 195384767 195385195 NM_144817_Camk1g - 195216632 195172540 168135 168135 212227 U 0 0 +chr1 195384767 195385195 NM_008059_G0s2 - 195108977 195098362 275790 275790 286405 U 0 0 +chr1 195384767 195385195 NM_008288_Hsd11b1 - 195090228 195047814 294539 294539 336953 U 0 0 +chr1 195384767 195385195 NM_008484_Lamb3 + 195033913 195170047 214720 350854 214720 D 0 0 +chr1 197057796 197057843 NM_007758_Cr2 - 197003002 196963005 54794 54794 94791 U 0 0 +chr1 197057796 197057843 NM_013499_Cr1l - 196957754 196924298 100042 100042 133498 U 0 0 +chr1 197057796 197057843 NM_010778_Cd46 - 196919007 196861976 138789 138789 195820 U 0 0 +chr1 197057796 197057843 AK030377_A330023F24Rik - 196826186 196781953 231610 231610 275843 U 0 0 +chr1 24609562 24609623 NM_007733_Col19a1 - 24602262 24258667 7300 7300 350895 U 0 0 +chr1 24609562 24609623 NM_026719_Lmbrd1 + 24593456 24847969 0 16106 238346 . 1 0 +chr1 24609562 24609623 NM_026719_Lmbrd1 + 24820582 24823143 210959 210959 213520 U 0 0 +chr1 24609562 24609623 AK015559_4930472D16Rik - 25021989 25020851 411228 412366 411228 D 0 0 +chr1 24609923 24609992 NM_007733_Col19a1 - 24602262 24258667 7661 7661 351256 U 0 0 +chr1 24609923 24609992 NM_026719_Lmbrd1 + 24593456 24847969 0 16467 237977 . 1 0 +chr1 24609923 24609992 NM_026719_Lmbrd1 + 24820582 24823143 210590 210590 213151 U 0 0 +chr1 24609923 24609992 AK015559_4930472D16Rik - 25021989 25020851 410859 411997 410859 D 0 0 +chr1 24730996 24731077 NM_026719_Lmbrd1 + 24820582 24823143 89505 89505 92066 U 0 0 +chr1 24730996 24731077 NM_007733_Col19a1 - 24602262 24258667 128734 128734 472329 U 0 0 +chr1 24730996 24731077 NM_026719_Lmbrd1 + 24593456 24847969 0 137540 116892 . 1 0 +chr1 24730996 24731077 AK015559_4930472D16Rik - 25021989 25020851 289774 290912 289774 D 0 0 +chr1 26734195 26734485 NM_175642_Bai3 - 25887514 25084207 846681 846681 1649988 U 0 0 +chr1 26734195 26734485 AK015559_4930472D16Rik - 25021989 25020851 1712206 1712206 1713344 U 0 0 +chr1 26734195 26734485 NM_026719_Lmbrd1 + 24820582 24823143 1911052 1913613 1911052 D 0 0 +chr1 26734195 26734485 NM_007733_Col19a1 - 24602262 24258667 2131933 2131933 2475528 U 0 0 +chr1 34206924 34207100 NM_134448_Dst + 33965107 34411632 0 241817 204532 . 1 0 +chr1 34206924 34207100 NM_177235_Bend6 - 33964764 33903283 242160 242160 303641 U 0 0 +chr1 34206924 34207100 NM_178601_Imp4 + 34496377 34511555 289277 289277 304455 U 0 0 +chr1 34206924 34207100 NM_027159_Ccdc115 - 34496517 34491854 284754 289417 284754 D 0 0 +chr1 36106813 36107058 NM_015818_Hs6st1 + 36125255 36163289 18197 18197 56231 U 0 0 +chr1 36106813 36107058 NM_198899_Ugcgl1 - 36301555 36196873 89815 194497 89815 D 0 0 +chr1 36106813 36107058 NM_153408_Neurl3 - 36355139 36321504 214446 248081 214446 D 0 0 +chr1 36106813 36107058 NM_145996_Arid5a + 36359349 36380874 252291 252291 273816 U 0 0 +chr1 39492140 39492513 NM_018775_Tbc1d8 - 39544345 39428350 0 51832 63790 . 1 0 +chr1 39492140 39492513 NM_053257_Rpl31 + 39421000 39429094 63046 71140 63046 D 0 0 +chr1 39492140 39492513 BC049091_D1Bwg0212e + 39592545 39603734 100032 100032 111221 U 0 0 +chr1 39492140 39492513 NM_170597_Creg2 - 39708307 39677083 184570 215794 184570 D 0 0 +chr1 40325917 40326123 NM_008362_Il1r1 + 40274145 40373439 0 51772 47316 . 1 0 +chr1 40325917 40326123 NM_133193_Il1rl2 + 40381454 40447345 55331 55331 121222 U 0 0 +chr1 40325917 40326123 NM_001025602_Il1rl1 + 40462708 40522260 136585 136585 196137 U 0 0 +chr1 40325917 40326123 NM_010555_Il1r2 + 40130058 40182052 143865 195859 143865 D 0 0 +chr1 44195449 44195639 NM_011729_Ercc5 + 44204270 44256568 8631 8631 60929 U 0 0 +chr1 44195449 44195639 NM_023645_Kdelc1 - 44177102 44143458 18347 18347 51991 U 0 0 +chr1 44195449 44195639 NM_144558_Bivm + 44175822 44201615 0 19627 5976 . 1 0 +chr1 44195449 44195639 NM_009418_Tpp2 + 43936027 44065003 130446 259422 130446 D 0 0 +chr1 52625416 52625560 NM_008667_Nab1 - 52611216 52487127 14200 14200 138289 U 0 0 +chr1 52625416 52625560 NM_001142647_Tmem194b + 52687569 52708760 62009 62009 83200 U 0 0 +chr1 52625416 52625560 NM_133829_Mfsd6 - 52784383 52702101 76541 158823 76541 D 0 0 +chr1 52625416 52625560 NM_008384_Inpp1 - 52890006 52826936 201376 264446 201376 D 0 0 +chr1 54631692 54631815 ENSMUST00000094950_Pgap1 - 54614539 54529849 17153 17153 101843 U 0 0 +chr1 54631692 54631815 NM_001001883_Hecw2 - 54252002 53867026 379690 379690 764666 U 0 0 +chr1 54631692 54631815 NM_030025_Ccdc150 + 54251865 54451794 179898 379827 179898 D 0 0 +chr1 54631692 54631815 NM_031179_Sf3b1 - 55084369 55042016 410201 452554 410201 D 0 0 +chr1 55283572 55283675 NM_028713_Rftn2 - 55283748 55227030 0 73 56542 . 1 1 +chr1 55283572 55283675 NM_175439_Mars2 + 55294084 55297625 10409 10409 13950 U 0 0 +chr1 55283572 55283675 NM_025283_Mobkl3 + 55187734 55211736 71836 95838 71836 D 0 0 +chr1 55283572 55283675 NM_001039710_Coq10b + 55101051 55129538 154034 182521 154034 D 0 0 +chr1 63664888 63665018 NM_011780_Adam23 + 63640970 63642850 22038 23918 22038 D 0 0 +chr1 63664888 63665018 NM_029696_Mdh1b - 63776894 63745401 80383 111876 80383 D 0 0 +chr1 63664888 63665018 NM_172422_Fastkd2 + 63777134 63803028 112116 112116 138010 U 0 0 +chr1 63664888 63665018 NM_011780_Adam23 + 63482194 63639230 25658 182694 25658 D 0 0 +chr1 72769824 72770056 NM_176980_Ankar - 72747143 72689581 22681 22681 80243 U 0 0 +chr1 72769824 72770056 NM_008342_Igfbp2 + 72840313 72899038 70257 70257 128982 U 0 0 +chr1 72769824 72770056 NM_018817_Smarcal1 + 72629842 72679806 90018 139982 90018 D 0 0 +chr1 72769824 72770056 NM_010518_Igfbp5 - 72921468 72904507 134451 151412 134451 D 0 0 +chr1 72770058 72770226 NM_176980_Ankar - 72747143 72689581 22915 22915 80477 U 0 0 +chr1 72770058 72770226 NM_008342_Igfbp2 + 72840313 72899038 70087 70087 128812 U 0 0 +chr1 72770058 72770226 NM_018817_Smarcal1 + 72629842 72679806 90252 140216 90252 D 0 0 +chr1 72770058 72770226 NM_010518_Igfbp5 - 72921468 72904507 134281 151242 134281 D 0 0 +chr1 72815517 72815742 NM_008342_Igfbp2 + 72840313 72899038 24571 24571 83296 U 0 0 +chr1 72815517 72815742 NM_176980_Ankar - 72747143 72689581 68374 68374 125936 U 0 0 +chr1 72815517 72815742 NM_010518_Igfbp5 - 72921468 72904507 88765 105726 88765 D 0 0 +chr1 72815517 72815742 NM_018817_Smarcal1 + 72629842 72679806 135711 185675 135711 D 0 0 +chr1 75481920 75482054 NM_001001565_Chpf - 75476437 75470923 5483 5483 10997 U 0 0 +chr1 75481920 75482054 NM_178884_Obsl1 - 75503218 75482401 347 21164 347 D 0 0 +chr1 75481920 75482054 NM_010564_Inha + 75503647 75506924 21593 21593 24870 U 0 0 +chr1 75481920 75482054 NM_183022_Accn4 + 75447063 75470207 11713 34857 11713 D 0 0 +chr1 77457642 77457791 NM_007936_Epha4 - 77511653 77280640 0 53862 177002 . 1 0 +chr1 77457642 77457791 NM_001110783_Ank1 - 77766452 77759424 301633 308661 301633 D 0 0 +chr1 77457642 77457791 NM_008781_Pax3 - 78193701 78047196 589405 735910 589405 D 0 0 +chr1 77457642 77457791 NM_001004173_Sgpp2 + 78306692 78416864 848901 848901 959073 U 0 0 +chr1 78630893 78631160 NM_028817_Acsl3 + 78654388 78743434 23228 23228 112274 U 0 0 +chr1 78630893 78631160 NM_011811_Farsb - 78506689 78414533 124204 124204 216360 U 0 0 +chr1 78630893 78631160 BC034187_BC035947 - 78497758 78493611 133135 133135 137282 U 0 0 +chr1 78630893 78631160 NM_026713_Mogat1 + 78496730 78564215 66678 134163 66678 D 0 0 +chr1 88408969 88409267 NM_172974_Cops7b + 88478926 88503950 69659 69659 94683 U 0 0 +chr1 88408969 88409267 NM_008801_Pde6d - 88479102 88427331 18064 69835 18064 D 0 0 +chr1 88408969 88409267 NM_010341_Nmur1 - 88297441 88282479 111528 111528 126490 U 0 0 +chr1 88408969 88409267 NM_010880_Ncl - 88255995 88241155 152974 152974 167814 U 0 0 +chr1 89989553 89989714 NM_201641_Ugt1a10 + 89922380 90115570 0 67173 125856 . 1 0 +chr1 89989553 89989714 NM_008299_Dnajb3 - 90102337 90101307 111593 112623 111593 D 0 0 +chr1 89989553 89989714 NM_198652_6430706D22Rik - 90174174 90158880 169166 184460 169166 D 0 0 +chr1 89989553 89989714 NM_134252_Trpm8 + 90181363 90285482 191649 191649 295768 U 0 0 +chr1 90412932 90413132 NM_008132_Glrp1 - 90406631 90396446 6301 6301 16486 U 0 0 +chr1 90412932 90413132 NM_029269_Spp2 + 90303568 90373213 39719 109364 39719 D 0 0 +chr1 90412932 90413132 NM_177305_Arl4c - 90617572 90569702 156570 204440 156570 D 0 0 +chr1 90412932 90413132 NM_134252_Trpm8 + 90181363 90285482 127450 231569 127450 D 0 0 +chr1 90592499 90592629 NM_177305_Arl4c - 90617572 90569702 0 24943 22797 . 1 0 +chr1 90592499 90592629 NM_008132_Glrp1 - 90406631 90396446 185868 185868 196053 U 0 0 +chr1 90592499 90592629 NM_029269_Spp2 + 90303568 90373213 219286 288931 219286 D 0 0 +chr1 90592499 90592629 NM_133816_Sh3bp4 + 90966984 91051778 374355 374355 459149 U 0 0 +chr1 91496003 91496145 NM_178119_Agap1 + 91351421 91791845 0 144582 295700 . 1 0 +chr1 91496003 91496145 NM_010262_Gbx2 - 91831059 91824531 328386 334914 328386 D 0 0 +chr1 91496003 91496145 NM_139152_Asb18 - 91911152 91849253 353108 415007 353108 D 0 0 +chr1 91496003 91496145 NM_133816_Sh3bp4 + 90966984 91051778 444225 529019 444225 D 0 0 +chr1 91496155 91496319 NM_178119_Agap1 + 91351421 91791845 0 144734 295526 . 1 0 +chr1 91496155 91496319 NM_010262_Gbx2 - 91831059 91824531 328212 334740 328212 D 0 0 +chr1 91496155 91496319 NM_139152_Asb18 - 91911152 91849253 352934 414833 352934 D 0 0 +chr1 91496155 91496319 NM_133816_Sh3bp4 + 90966984 91051778 444377 529171 444377 D 0 0 +chr1 92070253 92070431 NM_007722_Cxcr7 + 92100063 92112863 29632 29632 42432 U 0 0 +chr1 92070253 92070431 NM_139152_Asb18 - 91911152 91849253 159101 159101 221000 U 0 0 +chr1 92070253 92070431 NM_010262_Gbx2 - 91831059 91824531 239194 239194 245722 U 0 0 +chr1 92070253 92070431 NM_133805_Cops8 + 92499556 92564446 429125 429125 494015 U 0 0 +chr1 95186508 95186637 NM_178051_Mterfd2 - 95202630 95195779 9142 15993 9142 D 0 0 +chr1 95186508 95186637 NM_023200_Ppp1r7 + 95239431 95266345 52794 52794 79708 U 0 0 +chr1 95186508 95186637 NM_080850_Pask - 95240039 95205357 18720 53402 18720 D 0 0 +chr1 95186508 95186637 NM_172463_Sned1 + 95132418 95197642 0 54090 11005 . 1 0 +chr1 9619046 9619167 NM_178399_3110035E14Rik + 9591248 9617222 1824 27798 1824 D 0 0 +chr1 9619046 9619167 NM_008651_Mybl1 - 9690280 9635825 16658 71113 16658 D 0 0 +chr1 9619046 9619167 NM_175236_Adhfe1 + 9538049 9570746 48300 80997 48300 D 0 0 +chr1 9619046 9619167 NM_021511_Rrs1 + 9535513 9537532 81514 83533 81514 D 0 0 +chr1 9619175 9619382 NM_178399_3110035E14Rik + 9591248 9617222 1953 27927 1953 D 0 0 +chr1 9619175 9619382 NM_008651_Mybl1 - 9690280 9635825 16443 70898 16443 D 0 0 +chr1 9619175 9619382 NM_175236_Adhfe1 + 9538049 9570746 48429 81126 48429 D 0 0 +chr1 9619175 9619382 NM_021511_Rrs1 + 9535513 9537532 81643 83662 81643 D 0 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/features_per_peak6.summary Thu Sep 01 04:47:28 2016 -0400 @@ -0,0 +1,70 @@ +#peak.chr peak.start peak.end gene.id strand TSS TES dist_closest dist_TSS dist_TES direction overlap_gene overlap_promoter +chr1 10617233 10617437 NM_177834_Cpa6 - 10710026 10314801 0 92589 302432 . 1 0 +chr1 108747519 108747791 NM_009190_Vps4b - 108739123 108665873 8396 8396 81646 U 0 0 +chr1 120760212 120760461 NM_023755_Tcfcp2l1 + 120524515 120655075 105137 235697 105137 D 0 0 +chr1 132950929 132951247 NM_010548_Il10 + 132916424 132921547 29382 34505 29382 D 0 0 +chr1 133114860 133115015 NM_018750_Rassf5 - 133144761 133072991 0 29746 41869 . 1 0 +chr1 135582677 135582828 NM_001159649_Lax1 - 135586665 135575626 0 3837 7051 . 1 0 +chr1 135851853 135852218 NM_054077_Prelp - 135865173 135806855 0 12955 44998 . 1 0 +chr1 136956468 136956598 NM_007955_Ptprv - 137029151 137004306 47708 72553 47708 D 0 0 +chr1 13829227 13829564 NM_001011873_Xkr9 + 13658862 13691794 137433 170365 137433 D 0 0 +chr1 138437726 138437860 NM_177643_Zfp281 + 138487073 138526617 49213 49213 88757 U 0 0 +chr1 140381656 140381785 NM_021605_Nek7 - 140516775 140379472 0 134990 2184 . 1 0 +chr1 145591041 145591176 NM_001038592_Glrx2 + 145585774 145608282 0 5267 17106 . 1 0 +chr1 154971572 154971673 NM_008485_Lamc2 - 155033557 154969890 0 61884 1682 . 1 0 +chr1 155123313 155123435 NM_010683_Lamc1 - 155179906 155065803 0 56471 57510 . 1 0 +chr1 158510523 158510813 NM_009230_Soat1 - 158417632 158354679 92891 92891 155844 U 0 0 +chr1 158537267 158537411 NM_023141_Tor3a - 158604477 158583760 46349 67066 46349 D 0 0 +chr1 158580638 158580759 NM_023141_Tor3a - 158604477 158583760 3001 23718 3001 D 0 0 +chr1 158835251 158835391 NM_028333_Angptl1 + 158769061 158791209 44042 66190 44042 D 0 0 +chr1 159240736 159240866 BC055845_2810025M15Rik + 159342483 159350353 101617 101617 109487 U 0 0 +chr1 163827897 163828062 NM_026078_Pigc + 163860747 163957217 32685 32685 129155 U 0 0 +chr1 164215623 164215935 NR_002870_Dnm3os + 164119785 164155671 59952 95838 59952 D 0 0 +chr1 167222964 167223261 NM_145513_Tiprl - 167183116 167133855 39848 39848 89109 U 0 0 +chr1 167906284 167906554 NM_198934_Pou2f1 - 167932753 167804181 0 26199 102103 . 1 0 +chr1 170255081 170255260 NM_183355_Pbx1 - 170512777 170049495 0 257517 205586 . 1 0 +chr1 17030405 17030545 NM_020604_Jph1 - 17087942 16837549 0 57397 192856 . 1 0 +chr1 172620779 172620912 NM_177068_Olfml2b + 172569075 172612915 7864 51704 7864 D 0 0 +chr1 172620917 172621080 NM_177068_Olfml2b + 172569075 172612915 8002 51842 8002 D 0 0 +chr1 174376470 174376659 NM_029612_Slamf9 + 174392516 174408706 15857 15857 32047 U 0 0 +chr1 181061299 181061446 NM_177757_Kif26b + 180720593 180862983 198316 340706 198316 D 0 0 +chr1 182479646 182479905 NM_007415_Parp1 + 182499033 182531385 19128 19128 51480 U 0 0 +chr1 185854947 185855105 NM_022019_Dusp10 + 185755009 185899515 0 99938 44410 . 1 0 +chr1 194258648 194259032 NM_010600_Kcnh1 + 194014507 194368391 0 244141 109359 . 1 0 +chr1 194645118 194645475 NM_144881_Hhat - 194649833 194320603 0 4358 324515 . 1 0 +chr1 194957396 194957723 NM_145415_AA408296 - 194956446 194918802 950 950 38594 U 0 1 +chr1 195324443 195324741 NM_144817_Camk1g - 195216632 195172540 107811 107811 151903 U 0 0 +chr1 195330701 195330930 NM_144817_Camk1g - 195216632 195172540 114069 114069 158161 U 0 0 +chr1 195338316 195338616 NM_144817_Camk1g - 195216632 195172540 121684 121684 165776 U 0 0 +chr1 195342728 195342985 NM_144817_Camk1g - 195216632 195172540 126096 126096 170188 U 0 0 +chr1 195384767 195385195 NM_144817_Camk1g - 195216632 195172540 168135 168135 212227 U 0 0 +chr1 197057796 197057843 NM_007758_Cr2 - 197003002 196963005 54794 54794 94791 U 0 0 +chr1 24609562 24609623 NM_007733_Col19a1 - 24602262 24258667 7300 7300 350895 U 0 0 +chr1 24609923 24609992 NM_007733_Col19a1 - 24602262 24258667 7661 7661 351256 U 0 0 +chr1 24730996 24731077 NM_026719_Lmbrd1 + 24820582 24823143 89505 89505 92066 U 0 0 +chr1 26734195 26734485 NM_175642_Bai3 - 25887514 25084207 846681 846681 1649988 U 0 0 +chr1 34206924 34207100 NM_134448_Dst + 33965107 34411632 0 241817 204532 . 1 0 +chr1 36106813 36107058 NM_015818_Hs6st1 + 36125255 36163289 18197 18197 56231 U 0 0 +chr1 39492140 39492513 NM_018775_Tbc1d8 - 39544345 39428350 0 51832 63790 . 1 0 +chr1 40325917 40326123 NM_008362_Il1r1 + 40274145 40373439 0 51772 47316 . 1 0 +chr1 44195449 44195639 NM_011729_Ercc5 + 44204270 44256568 8631 8631 60929 U 0 0 +chr1 52625416 52625560 NM_008667_Nab1 - 52611216 52487127 14200 14200 138289 U 0 0 +chr1 54631692 54631815 ENSMUST00000094950_Pgap1 - 54614539 54529849 17153 17153 101843 U 0 0 +chr1 55283572 55283675 NM_028713_Rftn2 - 55283748 55227030 0 73 56542 . 1 1 +chr1 63664888 63665018 NM_011780_Adam23 + 63640970 63642850 22038 23918 22038 D 0 0 +chr1 72769824 72770056 NM_176980_Ankar - 72747143 72689581 22681 22681 80243 U 0 0 +chr1 72770058 72770226 NM_176980_Ankar - 72747143 72689581 22915 22915 80477 U 0 0 +chr1 72815517 72815742 NM_008342_Igfbp2 + 72840313 72899038 24571 24571 83296 U 0 0 +chr1 75481920 75482054 NM_001001565_Chpf - 75476437 75470923 5483 5483 10997 U 0 0 +chr1 77457642 77457791 NM_007936_Epha4 - 77511653 77280640 0 53862 177002 . 1 0 +chr1 78630893 78631160 NM_028817_Acsl3 + 78654388 78743434 23228 23228 112274 U 0 0 +chr1 88408969 88409267 NM_172974_Cops7b + 88478926 88503950 69659 69659 94683 U 0 0 +chr1 89989553 89989714 NM_201641_Ugt1a10 + 89922380 90115570 0 67173 125856 . 1 0 +chr1 90412932 90413132 NM_008132_Glrp1 - 90406631 90396446 6301 6301 16486 U 0 0 +chr1 90592499 90592629 NM_177305_Arl4c - 90617572 90569702 0 24943 22797 . 1 0 +chr1 91496003 91496145 NM_178119_Agap1 + 91351421 91791845 0 144582 295700 . 1 0 +chr1 91496155 91496319 NM_178119_Agap1 + 91351421 91791845 0 144734 295526 . 1 0 +chr1 92070253 92070431 NM_007722_Cxcr7 + 92100063 92112863 29632 29632 42432 U 0 0 +chr1 95186508 95186637 NM_178051_Mterfd2 - 95202630 95195779 9142 15993 9142 D 0 0 +chr1 9619046 9619167 NM_178399_3110035E14Rik + 9591248 9617222 1824 27798 1824 D 0 0 +chr1 9619175 9619382 NM_178399_3110035E14Rik + 9591248 9617222 1953 27927 1953 D 0 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/peaks_per_feature6.out Thu Sep 01 04:47:28 2016 -0400 @@ -0,0 +1,3825 @@ +#gene.id gene.chr gene.start gene.end gene.strand chr start end dist_closest dist_TSS direction in_the_gene +AF064749_Col6a3 chr1 92566771 92800755 - chr1 92070253 92070431 496340 730324 U NO +AF064749_Col6a3 chr1 92566771 92800755 - chr1 91496155 91496319 1070452 1304436 U NO +AF064749_Col6a3 chr1 92566771 92800755 - chr1 91496003 91496145 1070626 1304610 U NO +AF064749_Col6a3 chr1 92566771 92800755 - chr1 90592499 90592629 1974142 2208126 U NO +AK015559_4930472D16Rik chr1 25020851 25021989 - chr1 24730996 24731077 289774 290912 U NO +AK015559_4930472D16Rik chr1 25020851 25021989 - chr1 24609923 24609992 410859 411997 U NO +AK015559_4930472D16Rik chr1 25020851 25021989 - chr1 24609562 24609623 411228 412366 U NO +AK015559_4930472D16Rik chr1 25020851 25021989 - chr1 26734195 26734485 1712206 1712206 D NO +AK030377_A330023F24Rik chr1 196781953 196826186 - chr1 197057796 197057843 231610 231610 D NO +AK030377_A330023F24Rik chr1 196781953 196826186 - chr1 195384767 195385195 1396758 1440991 U NO +AK030377_A330023F24Rik chr1 196781953 196826186 - chr1 195342728 195342985 1438968 1483201 U NO +AK030377_A330023F24Rik chr1 196781953 196826186 - chr1 195338316 195338616 1443337 1487570 U NO +AK080193_A530079E22Rik chr1 89401837 89403491 - chr1 89989553 89989714 586062 586062 D NO +AK080193_A530079E22Rik chr1 89401837 89403491 - chr1 88408969 88409267 992570 994224 U NO +AK080193_A530079E22Rik chr1 89401837 89403491 - chr1 90412932 90413132 1009441 1009441 D NO +AK080193_A530079E22Rik chr1 89401837 89403491 - chr1 90592499 90592629 1189008 1189008 D NO +AK082264_C230030N03Rik chr1 34735043 34781084 + chr1 34206924 34207100 527943 527943 D NO +AK082264_C230030N03Rik chr1 34735043 34781084 + chr1 36106813 36107058 1325729 1371770 U NO +AK082264_C230030N03Rik chr1 34735043 34781084 + chr1 39492140 39492513 4711056 4757097 U NO +AK082264_C230030N03Rik chr1 34735043 34781084 + chr1 40325917 40326123 5544833 5590874 U NO +BC006931_AI597479 chr1 43153807 43172843 + chr1 44195449 44195639 1022606 1041642 U NO +BC006931_AI597479 chr1 43153807 43172843 + chr1 40325917 40326123 2827684 2827684 D NO +BC006931_AI597479 chr1 43153807 43172843 + chr1 39492140 39492513 3661294 3661294 D NO +BC006931_AI597479 chr1 43153807 43172843 + chr1 36106813 36107058 7046749 7046749 D NO +BC021773_Glb1l chr1 75193364 75207353 - chr1 75481920 75482054 274567 274567 D NO +BC021773_Glb1l chr1 75193364 75207353 - chr1 77457642 77457791 2250289 2250289 D NO +BC021773_Glb1l chr1 75193364 75207353 - chr1 72815517 72815742 2377622 2391611 U NO +BC021773_Glb1l chr1 75193364 75207353 - chr1 72770058 72770226 2423138 2437127 U NO +BC023951_D1Ertd622e chr1 99540054 99558631 - chr1 95186508 95186637 4353417 4371994 U NO +BC023951_D1Ertd622e chr1 99540054 99558631 - chr1 92070253 92070431 7469623 7488200 U NO +BC023951_D1Ertd622e chr1 99540054 99558631 - chr1 91496155 91496319 8043735 8062312 U NO +BC023951_D1Ertd622e chr1 99540054 99558631 - chr1 91496003 91496145 8043909 8062486 U NO +BC028767_3110009E18Rik chr1 122017764 122114603 + chr1 120760212 120760461 1257303 1257303 D NO +BC028767_3110009E18Rik chr1 122017764 122114603 + chr1 132950929 132951247 10836326 10933165 U NO +BC028767_3110009E18Rik chr1 122017764 122114603 + chr1 133114860 133115015 11000257 11097096 U NO +BC028767_3110009E18Rik chr1 122017764 122114603 + chr1 108747519 108747791 13269973 13269973 D NO +BC031781_BC031781 chr1 182781250 182798240 + chr1 182479646 182479905 301345 301345 D NO +BC031781_BC031781 chr1 182781250 182798240 + chr1 181061299 181061446 1719804 1719804 D NO +BC031781_BC031781 chr1 182781250 182798240 + chr1 185854947 185855105 3056707 3073697 U NO +BC031781_BC031781 chr1 182781250 182798240 + chr1 174376470 174376659 8404591 8404591 D NO +BC034187_BC035947 chr1 78493611 78497758 - chr1 78630893 78631160 133135 133135 D NO +BC034187_BC035947 chr1 78493611 78497758 - chr1 77457642 77457791 1035820 1039967 U NO +BC034187_BC035947 chr1 78493611 78497758 - chr1 75481920 75482054 3011557 3015704 U NO +BC034187_BC035947 chr1 78493611 78497758 - chr1 72815517 72815742 5677869 5682016 U NO +BC043098_Fam168b chr1 34870072 34917183 - chr1 34206924 34207100 662972 710083 U NO +BC043098_Fam168b chr1 34870072 34917183 - chr1 36106813 36107058 1189630 1189630 D NO +BC043098_Fam168b chr1 34870072 34917183 - chr1 39492140 39492513 4574957 4574957 D NO +BC043098_Fam168b chr1 34870072 34917183 - chr1 40325917 40326123 5408734 5408734 D NO +BC049091_D1Bwg0212e chr1 39592545 39603734 + chr1 39492140 39492513 100032 100032 D NO +BC049091_D1Bwg0212e chr1 39592545 39603734 + chr1 40325917 40326123 722183 733372 U NO +BC049091_D1Bwg0212e chr1 39592545 39603734 + chr1 36106813 36107058 3485487 3485487 D NO +BC049091_D1Bwg0212e chr1 39592545 39603734 + chr1 44195449 44195639 4591715 4602904 U NO +BC049713_Ankrd45 chr1 163072817 163099826 + chr1 163827897 163828062 728071 755080 U NO +BC049713_Ankrd45 chr1 163072817 163099826 + chr1 164215623 164215935 1115797 1142806 U NO +BC049713_Ankrd45 chr1 163072817 163099826 + chr1 159240736 159240866 3831951 3831951 D NO +BC049713_Ankrd45 chr1 163072817 163099826 + chr1 167222964 167223261 4123138 4150147 U NO +BC050813_4921511C04Rik chr1 37157481 37244861 + chr1 36106813 36107058 1050423 1050423 D NO +BC050813_4921511C04Rik chr1 37157481 37244861 + chr1 39492140 39492513 2247279 2334659 U NO +BC050813_4921511C04Rik chr1 37157481 37244861 + chr1 34206924 34207100 2950381 2950381 D NO +BC050813_4921511C04Rik chr1 37157481 37244861 + chr1 40325917 40326123 3081056 3168436 U NO +BC051128_4921521F21Rik chr1 65059273 65079312 - chr1 63664888 63665018 1394255 1414294 U NO +BC051128_4921521F21Rik chr1 65059273 65079312 - chr1 72769824 72770056 7690512 7690512 D NO +BC051128_4921521F21Rik chr1 65059273 65079312 - chr1 72770058 72770226 7690746 7690746 D NO +BC051128_4921521F21Rik chr1 65059273 65079312 - chr1 72815517 72815742 7736205 7736205 D NO +BC052693_2810422O20Rik chr1 165924541 165927371 + chr1 167222964 167223261 1295593 1298423 U NO +BC052693_2810422O20Rik chr1 165924541 165927371 + chr1 164215623 164215935 1708606 1708606 D NO +BC052693_2810422O20Rik chr1 165924541 165927371 + chr1 167906284 167906554 1978913 1981743 U NO +BC052693_2810422O20Rik chr1 165924541 165927371 + chr1 163827897 163828062 2096479 2096479 D NO +BC052931_A630001G21Rik chr1 87601462 87674840 - chr1 88408969 88409267 734129 734129 D NO +BC052931_A630001G21Rik chr1 87601462 87674840 - chr1 89989553 89989714 2314713 2314713 D NO +BC052931_A630001G21Rik chr1 87601462 87674840 - chr1 90412932 90413132 2738092 2738092 D NO +BC052931_A630001G21Rik chr1 87601462 87674840 - chr1 90592499 90592629 2917659 2917659 D NO +BC053100_5730559C18Rik chr1 138110108 138130841 - chr1 138437726 138437860 306885 306885 D NO +BC053100_5730559C18Rik chr1 138110108 138130841 - chr1 136956468 136956598 1153510 1174243 U NO +BC053100_5730559C18Rik chr1 138110108 138130841 - chr1 140381656 140381785 2250815 2250815 D NO +BC053100_5730559C18Rik chr1 138110108 138130841 - chr1 135851853 135852218 2257890 2278623 U NO +BC054802_9630058J23Rik chr1 181476521 181558044 + chr1 181061299 181061446 415075 415075 D NO +BC054802_9630058J23Rik chr1 181476521 181558044 + chr1 182479646 182479905 921602 1003125 U NO +BC054802_9630058J23Rik chr1 181476521 181558044 + chr1 185854947 185855105 4296903 4378426 U NO +BC054802_9630058J23Rik chr1 181476521 181558044 + chr1 174376470 174376659 7099862 7099862 D NO +BC055845_2810025M15Rik chr1 159342483 159350353 + chr1 159240736 159240866 101617 101617 D NO +BC055845_2810025M15Rik chr1 159342483 159350353 + chr1 158835251 158835391 507092 507092 D NO +BC055845_2810025M15Rik chr1 159342483 159350353 + chr1 158580638 158580759 761724 761724 D NO +BC055845_2810025M15Rik chr1 159342483 159350353 + chr1 158537267 158537411 805072 805072 D NO +BC055955_A130010J15Rik chr1 194999663 195004015 + chr1 194957396 194957723 41940 41940 D NO +BC055955_A130010J15Rik chr1 194999663 195004015 + chr1 195324443 195324741 320428 324780 U NO +BC055955_A130010J15Rik chr1 194999663 195004015 + chr1 195330701 195330930 326686 331038 U NO +BC055955_A130010J15Rik chr1 194999663 195004015 + chr1 195338316 195338616 334301 338653 U NO +BC057872_Rab3gap2 chr1 187028006 187110623 + chr1 185854947 185855105 1172901 1172901 D NO +BC057872_Rab3gap2 chr1 187028006 187110623 + chr1 182479646 182479905 4548101 4548101 D NO +BC057872_Rab3gap2 chr1 187028006 187110623 + chr1 181061299 181061446 5966560 5966560 D NO +BC057872_Rab3gap2 chr1 187028006 187110623 + chr1 194258648 194259032 7148025 7230642 U NO +BC058417_2610017I09Rik chr1 42648822 42751667 - chr1 44195449 44195639 1443782 1443782 D NO +BC058417_2610017I09Rik chr1 42648822 42751667 - chr1 40325917 40326123 2322699 2425544 U NO +BC058417_2610017I09Rik chr1 42648822 42751667 - chr1 39492140 39492513 3156309 3259154 U NO +BC058417_2610017I09Rik chr1 42648822 42751667 - chr1 36106813 36107058 6541764 6644609 U NO +BC059254_Phlpp chr1 108042052 108306367 + chr1 108747519 108747791 441152 705467 U NO +BC059254_Phlpp chr1 108042052 108306367 + chr1 120760212 120760461 12453845 12718160 U NO +BC059254_Phlpp chr1 108042052 108306367 + chr1 95186508 95186637 12855415 12855415 D NO +BC059254_Phlpp chr1 108042052 108306367 + chr1 92070253 92070431 15971621 15971621 D NO +BC070435_Fam123c chr1 34620070 34671545 + chr1 34206924 34207100 412970 412970 D NO +BC070435_Fam123c chr1 34620070 34671545 + chr1 36106813 36107058 1435268 1486743 U NO +BC070435_Fam123c chr1 34620070 34671545 + chr1 39492140 39492513 4820595 4872070 U NO +BC070435_Fam123c chr1 34620070 34671545 + chr1 40325917 40326123 5654372 5705847 U NO +BC070446_Fam135a chr1 24017617 24107170 - chr1 24609562 24609623 502392 502392 D NO +BC070446_Fam135a chr1 24017617 24107170 - chr1 24609923 24609992 502753 502753 D NO +BC070446_Fam135a chr1 24017617 24107170 - chr1 24730996 24731077 623826 623826 D NO +BC070446_Fam135a chr1 24017617 24107170 - chr1 26734195 26734485 2627025 2627025 D NO +BC071241_9430016H08Rik chr1 57463192 57497936 + chr1 55283572 55283675 2179517 2179517 D NO +BC071241_9430016H08Rik chr1 57463192 57497936 + chr1 54631692 54631815 2831377 2831377 D NO +BC071241_9430016H08Rik chr1 57463192 57497936 + chr1 52625416 52625560 4837632 4837632 D NO +BC071241_9430016H08Rik chr1 57463192 57497936 + chr1 63664888 63665018 6166952 6201696 U NO +BC072639_2010300C02Rik chr1 37646877 37776659 - chr1 36106813 36107058 1539819 1669601 U NO +BC072639_2010300C02Rik chr1 37646877 37776659 - chr1 39492140 39492513 1715481 1715481 D NO +BC072639_2010300C02Rik chr1 37646877 37776659 - chr1 40325917 40326123 2549258 2549258 D NO +BC072639_2010300C02Rik chr1 37646877 37776659 - chr1 34206924 34207100 3439777 3569559 U NO +BC080290_5033414K04Rik chr1 84032539 84360735 - chr1 88408969 88409267 4048234 4048234 D NO +BC080290_5033414K04Rik chr1 84032539 84360735 - chr1 89989553 89989714 5628818 5628818 D NO +BC080290_5033414K04Rik chr1 84032539 84360735 - chr1 78630893 78631160 5401379 5729575 U NO +BC080290_5033414K04Rik chr1 84032539 84360735 - chr1 90412932 90413132 6052197 6052197 D NO +BC082310_9430031J16Rik chr1 81073525 81338329 + chr1 78630893 78631160 2442365 2442365 D NO +BC082310_9430031J16Rik chr1 81073525 81338329 + chr1 77457642 77457791 3615734 3615734 D NO +BC082310_9430031J16Rik chr1 81073525 81338329 + chr1 75481920 75482054 5591471 5591471 D NO +BC082310_9430031J16Rik chr1 81073525 81338329 + chr1 88408969 88409267 7070640 7335444 U NO +BC089525_2310007B03Rik chr1 95047933 95063386 - chr1 95186508 95186637 123122 123122 D NO +BC089525_2310007B03Rik chr1 95047933 95063386 - chr1 92070253 92070431 2977502 2992955 U NO +BC089525_2310007B03Rik chr1 95047933 95063386 - chr1 91496155 91496319 3551614 3567067 U NO +BC089525_2310007B03Rik chr1 95047933 95063386 - chr1 91496003 91496145 3551788 3567241 U NO +BC089561_Cep350 chr1 157692096 157820375 - chr1 158510523 158510813 690148 690148 D NO +BC089561_Cep350 chr1 157692096 157820375 - chr1 158537267 158537411 716892 716892 D NO +BC089561_Cep350 chr1 157692096 157820375 - chr1 158580638 158580759 760263 760263 D NO +BC089561_Cep350 chr1 157692096 157820375 - chr1 158835251 158835391 1014876 1014876 D NO +BC147491_A230074B11Rik chr1 37083441 37133840 + chr1 36106813 36107058 976383 976383 D NO +BC147491_A230074B11Rik chr1 37083441 37133840 + chr1 39492140 39492513 2358300 2408699 U NO +BC147491_A230074B11Rik chr1 37083441 37133840 + chr1 34206924 34207100 2876341 2876341 D NO +BC147491_A230074B11Rik chr1 37083441 37133840 + chr1 40325917 40326123 3192077 3242476 U NO +BC147657_9630028B13Rik chr1 187253234 187265698 - chr1 185854947 185855105 1398129 1410593 U NO +BC147657_9630028B13Rik chr1 187253234 187265698 - chr1 182479646 182479905 4773329 4785793 U NO +BC147657_9630028B13Rik chr1 187253234 187265698 - chr1 181061299 181061446 6191788 6204252 U NO +BC147657_9630028B13Rik chr1 187253234 187265698 - chr1 194258648 194259032 6992950 6992950 D NO +ENSMUST00000027997_Rgs5 chr1 171625108 171625913 + chr1 172620779 172620912 994866 995671 U NO +ENSMUST00000027997_Rgs5 chr1 171625108 171625913 + chr1 172620917 172621080 995004 995809 U NO +ENSMUST00000027997_Rgs5 chr1 171625108 171625913 + chr1 170255081 170255260 1369848 1369848 D NO +ENSMUST00000027997_Rgs5 chr1 171625108 171625913 + chr1 174376470 174376659 2750557 2751362 U NO +ENSMUST00000051203_1700001G17Rik chr1 33726669 33727551 + chr1 34206924 34207100 479373 480255 U NO +ENSMUST00000051203_1700001G17Rik chr1 33726669 33727551 + chr1 36106813 36107058 2379262 2380144 U NO +ENSMUST00000051203_1700001G17Rik chr1 33726669 33727551 + chr1 39492140 39492513 5764589 5765471 U NO +ENSMUST00000051203_1700001G17Rik chr1 33726669 33727551 + chr1 40325917 40326123 6598366 6599248 U NO +ENSMUST00000054333_A130050O07Rik chr1 139823828 139826840 + chr1 140381656 140381785 554816 557828 U NO +ENSMUST00000054333_A130050O07Rik chr1 139823828 139826840 + chr1 138437726 138437860 1385968 1385968 D NO +ENSMUST00000054333_A130050O07Rik chr1 139823828 139826840 + chr1 136956468 136956598 2867230 2867230 D NO +ENSMUST00000054333_A130050O07Rik chr1 139823828 139826840 + chr1 135851853 135852218 3971610 3971610 D NO +ENSMUST00000056879_C230029F24Rik chr1 49301475 49397265 + chr1 52625416 52625560 3228151 3323941 U NO +ENSMUST00000056879_C230029F24Rik chr1 49301475 49397265 + chr1 44195449 44195639 5105836 5105836 D NO +ENSMUST00000056879_C230029F24Rik chr1 49301475 49397265 + chr1 54631692 54631815 5234427 5330217 U NO +ENSMUST00000056879_C230029F24Rik chr1 49301475 49397265 + chr1 55283572 55283675 5886307 5982097 U NO +ENSMUST00000057543_A730013G03Rik chr1 194659323 194661397 - chr1 194645118 194645475 13848 15922 U NO +ENSMUST00000057543_A730013G03Rik chr1 194659323 194661397 - chr1 194957396 194957723 295999 295999 D NO +ENSMUST00000057543_A730013G03Rik chr1 194659323 194661397 - chr1 194258648 194259032 400291 402365 U NO +ENSMUST00000057543_A730013G03Rik chr1 194659323 194661397 - chr1 195324443 195324741 663046 663046 D NO +ENSMUST00000062637_4930470H14Rik chr1 175156866 175201240 + chr1 174376470 174376659 780207 780207 D NO +ENSMUST00000062637_4930470H14Rik chr1 175156866 175201240 + chr1 172620917 172621080 2535786 2535786 D NO +ENSMUST00000062637_4930470H14Rik chr1 175156866 175201240 + chr1 172620779 172620912 2535954 2535954 D NO +ENSMUST00000062637_4930470H14Rik chr1 175156866 175201240 + chr1 170255081 170255260 4901606 4901606 D NO +ENSMUST00000070048_ENSMUSG00000056128 chr1 92571736 92576368 + chr1 92070253 92070431 501305 501305 D NO +ENSMUST00000070048_ENSMUSG00000056128 chr1 92571736 92576368 + chr1 91496155 91496319 1075417 1075417 D NO +ENSMUST00000070048_ENSMUSG00000056128 chr1 92571736 92576368 + chr1 91496003 91496145 1075591 1075591 D NO +ENSMUST00000070048_ENSMUSG00000056128 chr1 92571736 92576368 + chr1 90592499 90592629 1979107 1979107 D NO +ENSMUST00000070987_EG433384 chr1 183781705 183783320 - chr1 182479646 182479905 1301800 1303415 U NO +ENSMUST00000070987_EG433384 chr1 183781705 183783320 - chr1 185854947 185855105 2071627 2071627 D NO +ENSMUST00000070987_EG433384 chr1 183781705 183783320 - chr1 181061299 181061446 2720259 2721874 U NO +ENSMUST00000070987_EG433384 chr1 183781705 183783320 - chr1 174376470 174376659 9405046 9406661 U NO +ENSMUST00000072395_Olfr1406 chr1 175113651 175120746 - chr1 174376470 174376659 736992 744087 U NO +ENSMUST00000072395_Olfr1406 chr1 175113651 175120746 - chr1 172620917 172621080 2492571 2499666 U NO +ENSMUST00000072395_Olfr1406 chr1 175113651 175120746 - chr1 172620779 172620912 2492739 2499834 U NO +ENSMUST00000072395_Olfr1406 chr1 175113651 175120746 - chr1 170255081 170255260 4858391 4865486 U NO +ENSMUST00000094288_Wdr64 chr1 177654798 177798070 + chr1 174376470 174376659 3278139 3278139 D NO +ENSMUST00000094288_Wdr64 chr1 177654798 177798070 + chr1 181061299 181061446 3263229 3406501 U NO +ENSMUST00000094288_Wdr64 chr1 177654798 177798070 + chr1 182479646 182479905 4681576 4824848 U NO +ENSMUST00000094288_Wdr64 chr1 177654798 177798070 + chr1 172620917 172621080 5033718 5033718 D NO +ENSMUST00000094950_Pgap1 chr1 54529849 54614539 - chr1 54631692 54631815 17153 17153 D NO +ENSMUST00000094950_Pgap1 chr1 54529849 54614539 - chr1 55283572 55283675 669033 669033 D NO +ENSMUST00000094950_Pgap1 chr1 54529849 54614539 - chr1 52625416 52625560 1904289 1988979 U NO +ENSMUST00000094950_Pgap1 chr1 54529849 54614539 - chr1 63664888 63665018 9050349 9050349 D NO +ENSMUST00000097776_Cnnm3 chr1 36567938 36585164 + chr1 36106813 36107058 460880 460880 D NO +ENSMUST00000097776_Cnnm3 chr1 36567938 36585164 + chr1 34206924 34207100 2360838 2360838 D NO +ENSMUST00000097776_Cnnm3 chr1 36567938 36585164 + chr1 39492140 39492513 2906976 2924202 U NO +ENSMUST00000097776_Cnnm3 chr1 36567938 36585164 + chr1 40325917 40326123 3740753 3757979 U NO +EU429481_Igfn1 chr1 137825893 137890307 - chr1 138437726 138437860 547419 547419 D NO +EU429481_Igfn1 chr1 137825893 137890307 - chr1 136956468 136956598 869295 933709 U NO +EU429481_Igfn1 chr1 137825893 137890307 - chr1 135851853 135852218 1973675 2038089 U NO +EU429481_Igfn1 chr1 137825893 137890307 - chr1 135582677 135582828 2243065 2307479 U NO +FJ024495_Ildr2 chr1 168236882 168239692 - chr1 167906284 167906554 330328 333138 U NO +FJ024495_Ildr2 chr1 168236882 168239692 - chr1 167222964 167223261 1013621 1016431 U NO +FJ024495_Ildr2 chr1 168236882 168239692 - chr1 170255081 170255260 2015389 2015389 D NO +FJ024495_Ildr2 chr1 168236882 168239692 - chr1 164215623 164215935 4020947 4023757 U NO +FJ210934_Unc80 chr1 66514856 66556109 + chr1 63664888 63665018 2849838 2849838 D NO +FJ210934_Unc80 chr1 66514856 66556109 + chr1 72769824 72770056 6213715 6254968 U NO +FJ210934_Unc80 chr1 66514856 66556109 + chr1 72770058 72770226 6213949 6255202 U NO +FJ210934_Unc80 chr1 66514856 66556109 + chr1 72815517 72815742 6259408 6300661 U NO +NM_001001565_Chpf chr1 75470923 75476437 - chr1 75481920 75482054 5483 5483 D NO +NM_001001565_Chpf chr1 75470923 75476437 - chr1 77457642 77457791 1981205 1981205 D NO +NM_001001565_Chpf chr1 75470923 75476437 - chr1 72815517 72815742 2655181 2660695 U NO +NM_001001565_Chpf chr1 75470923 75476437 - chr1 72770058 72770226 2700697 2706211 U NO +NM_001001809_Olfr218 chr1 175130421 175134469 + chr1 174376470 174376659 753762 753762 D NO +NM_001001809_Olfr218 chr1 175130421 175134469 + chr1 172620917 172621080 2509341 2509341 D NO +NM_001001809_Olfr218 chr1 175130421 175134469 + chr1 172620779 172620912 2509509 2509509 D NO +NM_001001809_Olfr218 chr1 175130421 175134469 + chr1 170255081 170255260 4875161 4875161 D NO +NM_001001883_Hecw2 chr1 53867026 54252002 - chr1 54631692 54631815 379690 379690 D NO +NM_001001883_Hecw2 chr1 53867026 54252002 - chr1 55283572 55283675 1031570 1031570 D NO +NM_001001883_Hecw2 chr1 53867026 54252002 - chr1 52625416 52625560 1241466 1626442 U NO +NM_001001883_Hecw2 chr1 53867026 54252002 - chr1 63664888 63665018 9412886 9412886 D NO +NM_001003917_Atg9a chr1 75177439 75189181 - chr1 75481920 75482054 292739 292739 D NO +NM_001003917_Atg9a chr1 75177439 75189181 - chr1 77457642 77457791 2268461 2268461 D NO +NM_001003917_Atg9a chr1 75177439 75189181 - chr1 72815517 72815742 2361697 2373439 U NO +NM_001003917_Atg9a chr1 75177439 75189181 - chr1 72770058 72770226 2407213 2418955 U NO +NM_001004173_Sgpp2 chr1 78306692 78416864 + chr1 78630893 78631160 214029 324201 U NO +NM_001004173_Sgpp2 chr1 78306692 78416864 + chr1 77457642 77457791 848901 848901 D NO +NM_001004173_Sgpp2 chr1 78306692 78416864 + chr1 75481920 75482054 2824638 2824638 D NO +NM_001004173_Sgpp2 chr1 78306692 78416864 + chr1 72815517 72815742 5490950 5490950 D NO +NM_001005423_Mreg chr1 72170192 72258895 - chr1 72769824 72770056 510929 510929 D NO +NM_001005423_Mreg chr1 72170192 72258895 - chr1 72770058 72770226 511163 511163 D NO +NM_001005423_Mreg chr1 72170192 72258895 - chr1 72815517 72815742 556622 556622 D NO +NM_001005423_Mreg chr1 72170192 72258895 - chr1 75481920 75482054 3223025 3223025 D NO +NM_001005507_Smg7 chr1 154684125 154750410 - chr1 154971572 154971673 221162 221162 D NO +NM_001005507_Smg7 chr1 154684125 154750410 - chr1 155123313 155123435 372903 372903 D NO +NM_001005507_Smg7 chr1 154684125 154750410 - chr1 158510523 158510813 3760113 3760113 D NO +NM_001005507_Smg7 chr1 154684125 154750410 - chr1 158537267 158537411 3786857 3786857 D NO +NM_001005508_Arhgap30 chr1 173319072 173340822 + chr1 172620917 172621080 697992 697992 D NO +NM_001005508_Arhgap30 chr1 173319072 173340822 + chr1 172620779 172620912 698160 698160 D NO +NM_001005508_Arhgap30 chr1 173319072 173340822 + chr1 174376470 174376659 1035648 1057398 U NO +NM_001005508_Arhgap30 chr1 173319072 173340822 + chr1 170255081 170255260 3063812 3063812 D NO +NM_001005520_Olfr244 chr1 176032571 176067605 - chr1 174376470 174376659 1655912 1690946 U NO +NM_001005520_Olfr244 chr1 176032571 176067605 - chr1 172620917 172621080 3411491 3446525 U NO +NM_001005520_Olfr244 chr1 176032571 176067605 - chr1 172620779 172620912 3411659 3446693 U NO +NM_001005520_Olfr244 chr1 176032571 176067605 - chr1 181061299 181061446 4993694 4993694 D NO +NM_001008419_Aox3l1 chr1 58335180 58437083 + chr1 55283572 55283675 3051505 3051505 D NO +NM_001008419_Aox3l1 chr1 58335180 58437083 + chr1 54631692 54631815 3703365 3703365 D NO +NM_001008419_Aox3l1 chr1 58335180 58437083 + chr1 63664888 63665018 5227805 5329708 U NO +NM_001008419_Aox3l1 chr1 58335180 58437083 + chr1 52625416 52625560 5709620 5709620 D NO +NM_001008426_EG433365 chr1 155721475 155724001 + chr1 155123313 155123435 598040 598040 D NO +NM_001008426_EG433365 chr1 155721475 155724001 + chr1 154971572 154971673 749802 749802 D NO +NM_001008426_EG433365 chr1 155721475 155724001 + chr1 158510523 158510813 2786522 2789048 U NO +NM_001008426_EG433365 chr1 155721475 155724001 + chr1 158537267 158537411 2813266 2815792 U NO +NM_001008533_Adora1 chr1 136095799 136181661 - chr1 135851853 135852218 243581 329443 U NO +NM_001008533_Adora1 chr1 136095799 136181661 - chr1 135582677 135582828 512971 598833 U NO +NM_001008533_Adora1 chr1 136095799 136181661 - chr1 136956468 136956598 774807 774807 D NO +NM_001008533_Adora1 chr1 136095799 136181661 - chr1 138437726 138437860 2256065 2256065 D NO +NM_001009940_Il19 chr1 132786042 132915234 - chr1 132950929 132951247 35695 35695 D NO +NM_001009940_Il19 chr1 132786042 132915234 - chr1 133114860 133115015 199626 199626 D NO +NM_001009940_Il19 chr1 132786042 132915234 - chr1 135582677 135582828 2667443 2667443 D NO +NM_001009940_Il19 chr1 132786042 132915234 - chr1 135851853 135852218 2936619 2936619 D NO +NM_001011525_Olfr1415 chr1 94376258 94381054 - chr1 95186508 95186637 805454 805454 D NO +NM_001011525_Olfr1415 chr1 94376258 94381054 - chr1 92070253 92070431 2305827 2310623 U NO +NM_001011525_Olfr1415 chr1 94376258 94381054 - chr1 91496155 91496319 2879939 2884735 U NO +NM_001011525_Olfr1415 chr1 94376258 94381054 - chr1 91496003 91496145 2880113 2884909 U NO +NM_001011525_Olfr1415 chr1 94407669 94418761 - chr1 95186508 95186637 767747 767747 D NO +NM_001011525_Olfr1415 chr1 94407669 94418761 - chr1 92070253 92070431 2337238 2348330 U NO +NM_001011525_Olfr1415 chr1 94407669 94418761 - chr1 91496155 91496319 2911350 2922442 U NO +NM_001011525_Olfr1415 chr1 94407669 94418761 - chr1 91496003 91496145 2911524 2922616 U NO +NM_001011684_Nms chr1 38995917 39007113 + chr1 39492140 39492513 485027 496223 U NO +NM_001011684_Nms chr1 38995917 39007113 + chr1 40325917 40326123 1318804 1330000 U NO +NM_001011684_Nms chr1 38995917 39007113 + chr1 36106813 36107058 2888859 2888859 D NO +NM_001011684_Nms chr1 38995917 39007113 + chr1 34206924 34207100 4788817 4788817 D NO +NM_001011873_Xkr9 chr1 13658862 13691794 + chr1 13829227 13829564 137433 170365 U NO +NM_001011873_Xkr9 chr1 13658862 13691794 + chr1 10617233 10617437 3041425 3041425 D NO +NM_001011873_Xkr9 chr1 13658862 13691794 + chr1 17030405 17030545 3338611 3371543 U NO +NM_001011873_Xkr9 chr1 13658862 13691794 + chr1 9619175 9619382 4039480 4039480 D NO +NM_001011874_Xkr4 chr1 3203722 3713108 - chr1 9619046 9619167 5905938 5905938 D NO +NM_001011874_Xkr4 chr1 3203722 3713108 - chr1 9619175 9619382 5906067 5906067 D NO +NM_001011874_Xkr4 chr1 3203722 3713108 - chr1 10617233 10617437 6904125 6904125 D NO +NM_001011874_Xkr4 chr1 3203722 3713108 - chr1 13829227 13829564 10116119 10116119 D NO +NM_001012330_Zfp238 chr1 179359958 179380892 + chr1 181061299 181061446 1680407 1701341 U NO +NM_001012330_Zfp238 chr1 179359958 179380892 + chr1 182479646 182479905 3098754 3119688 U NO +NM_001012330_Zfp238 chr1 179359958 179380892 + chr1 174376470 174376659 4983299 4983299 D NO +NM_001012330_Zfp238 chr1 179359958 179380892 + chr1 185854947 185855105 6474055 6494989 U NO +NM_001013374_Lman2l chr1 36362897 36502078 - chr1 36106813 36107058 255839 395020 U NO +NM_001013374_Lman2l chr1 36362897 36502078 - chr1 34206924 34207100 2155797 2294978 U NO +NM_001013374_Lman2l chr1 36362897 36502078 - chr1 39492140 39492513 2990062 2990062 D NO +NM_001013374_Lman2l chr1 36362897 36502078 - chr1 40325917 40326123 3823839 3823839 D NO +NM_001013382_Lrrc52 chr1 169375806 169397136 - chr1 170255081 170255260 857945 857945 D NO +NM_001013382_Lrrc52 chr1 169375806 169397136 - chr1 167906284 167906554 1469252 1490582 U NO +NM_001013382_Lrrc52 chr1 169375806 169397136 - chr1 167222964 167223261 2152545 2173875 U NO +NM_001013382_Lrrc52 chr1 169375806 169397136 - chr1 172620779 172620912 3223643 3223643 D NO +NM_001013771_Gm973 chr1 59573136 59693241 + chr1 63664888 63665018 3971647 4091752 U NO +NM_001013771_Gm973 chr1 59573136 59693241 + chr1 55283572 55283675 4289461 4289461 D NO +NM_001013771_Gm973 chr1 59573136 59693241 + chr1 54631692 54631815 4941321 4941321 D NO +NM_001013771_Gm973 chr1 59573136 59693241 + chr1 52625416 52625560 6947576 6947576 D NO +NM_001013779_Aim2 chr1 175385835 175396165 + chr1 174376470 174376659 1009176 1009176 D NO +NM_001013779_Aim2 chr1 175385835 175396165 + chr1 172620917 172621080 2764755 2764755 D NO +NM_001013779_Aim2 chr1 175385835 175396165 + chr1 172620779 172620912 2764923 2764923 D NO +NM_001013779_Aim2 chr1 175385835 175396165 + chr1 170255081 170255260 5130575 5130575 D NO +NM_001014974_Ttll4 chr1 74708314 74748400 + chr1 75481920 75482054 733520 773606 U NO +NM_001014974_Ttll4 chr1 74708314 74748400 + chr1 72815517 72815742 1892572 1892572 D NO +NM_001014974_Ttll4 chr1 74708314 74748400 + chr1 72770058 72770226 1938088 1938088 D NO +NM_001014974_Ttll4 chr1 74708314 74748400 + chr1 72769824 72770056 1938258 1938258 D NO +NM_001024721_BC094916 chr1 175451304 175466101 - chr1 174376470 174376659 1074645 1089442 U NO +NM_001024721_BC094916 chr1 175451304 175466101 - chr1 172620917 172621080 2830224 2845021 U NO +NM_001024721_BC094916 chr1 175451304 175466101 - chr1 172620779 172620912 2830392 2845189 U NO +NM_001024721_BC094916 chr1 175451304 175466101 - chr1 170255081 170255260 5196044 5210841 U NO +NM_001024945_Qsox1 chr1 157625296 157670499 - chr1 158510523 158510813 840024 840024 D NO +NM_001024945_Qsox1 chr1 157625296 157670499 - chr1 158537267 158537411 866768 866768 D NO +NM_001024945_Qsox1 chr1 157625296 157670499 - chr1 158580638 158580759 910139 910139 D NO +NM_001024945_Qsox1 chr1 157625296 157670499 - chr1 158835251 158835391 1164752 1164752 D NO +NM_001025156_Ccdc93 chr1 123208865 123403037 + chr1 120760212 120760461 2448404 2448404 D NO +NM_001025156_Ccdc93 chr1 123208865 123403037 + chr1 132950929 132951247 9547892 9742064 U NO +NM_001025156_Ccdc93 chr1 123208865 123403037 + chr1 133114860 133115015 9711823 9905995 U NO +NM_001025156_Ccdc93 chr1 123208865 123403037 + chr1 135582677 135582828 12179640 12373812 U NO +NM_001025565_Lhx9 chr1 140694768 140740509 - chr1 140381656 140381785 312983 358724 U NO +NM_001025565_Lhx9 chr1 140694768 140740509 - chr1 138437726 138437860 2256908 2302649 U NO +NM_001025565_Lhx9 chr1 140694768 140740509 - chr1 136956468 136956598 3738170 3783911 U NO +NM_001025565_Lhx9 chr1 140694768 140740509 - chr1 145591041 145591176 4850532 4850532 D NO +NM_001025602_Il1rl1 chr1 40462708 40522260 + chr1 40325917 40326123 136585 136585 D NO +NM_001025602_Il1rl1 chr1 40462708 40522260 + chr1 39492140 39492513 970195 970195 D NO +NM_001025602_Il1rl1 chr1 40462708 40522260 + chr1 44195449 44195639 3673189 3732741 U NO +NM_001025602_Il1rl1 chr1 40462708 40522260 + chr1 36106813 36107058 4355650 4355650 D NO +NM_001029984_Fcrlb chr1 172836813 172843072 - chr1 172620917 172621080 215733 221992 U NO +NM_001029984_Fcrlb chr1 172836813 172843072 - chr1 172620779 172620912 215901 222160 U NO +NM_001029984_Fcrlb chr1 172836813 172843072 - chr1 174376470 174376659 1533398 1533398 D NO +NM_001029984_Fcrlb chr1 172836813 172843072 - chr1 170255081 170255260 2581553 2587812 U NO +NM_001037170_Tomm40l chr1 173147934 173152645 - chr1 172620917 172621080 526854 531565 U NO +NM_001037170_Tomm40l chr1 173147934 173152645 - chr1 172620779 172620912 527022 531733 U NO +NM_001037170_Tomm40l chr1 173147934 173152645 - chr1 174376470 174376659 1223825 1223825 D NO +NM_001037170_Tomm40l chr1 173147934 173152645 - chr1 170255081 170255260 2892674 2897385 U NO +NM_001037725_Fam117b chr1 59937517 60042190 + chr1 63664888 63665018 3622698 3727371 U NO +NM_001037725_Fam117b chr1 59937517 60042190 + chr1 55283572 55283675 4653842 4653842 D NO +NM_001037725_Fam117b chr1 59937517 60042190 + chr1 54631692 54631815 5305702 5305702 D NO +NM_001037725_Fam117b chr1 59937517 60042190 + chr1 52625416 52625560 7311957 7311957 D NO +NM_001037918_Lipt1 chr1 37928603 37934232 + chr1 39492140 39492513 1557908 1563537 U NO +NM_001037918_Lipt1 chr1 37928603 37934232 + chr1 36106813 36107058 1821545 1821545 D NO +NM_001037918_Lipt1 chr1 37928603 37934232 + chr1 40325917 40326123 2391685 2397314 U NO +NM_001037918_Lipt1 chr1 37928603 37934232 + chr1 34206924 34207100 3721503 3721503 D NO +NM_001037999_Dbi chr1 122009883 122046068 - chr1 120760212 120760461 1249422 1285607 U NO +NM_001037999_Dbi chr1 122009883 122046068 - chr1 132950929 132951247 10904861 10904861 D NO +NM_001037999_Dbi chr1 122009883 122046068 - chr1 133114860 133115015 11068792 11068792 D NO +NM_001037999_Dbi chr1 122009883 122046068 - chr1 108747519 108747791 13262092 13298277 U NO +NM_001038592_Glrx2 chr1 145585774 145608282 + chr1 145591041 145591176 0 5267 . YES +NM_001038592_Glrx2 chr1 145585774 145608282 + chr1 140381656 140381785 5203989 5203989 D NO +NM_001038592_Glrx2 chr1 145585774 145608282 + chr1 138437726 138437860 7147914 7147914 D NO +NM_001038592_Glrx2 chr1 145585774 145608282 + chr1 136956468 136956598 8629176 8629176 D NO +NM_001038619_Dnm3 chr1 163902671 164408155 - chr1 164215623 164215935 0 192220 . YES +NM_001038619_Dnm3 chr1 163902671 164408155 - chr1 163827897 163828062 74609 580093 U NO +NM_001038619_Dnm3 chr1 163902671 164408155 - chr1 167222964 167223261 2814809 2814809 D NO +NM_001038619_Dnm3 chr1 163902671 164408155 - chr1 167906284 167906554 3498129 3498129 D NO +NM_001039126_Asb1 chr1 93437143 93461729 + chr1 92070253 92070431 1366712 1366712 D NO +NM_001039126_Asb1 chr1 93437143 93461729 + chr1 95186508 95186637 1724779 1749365 U NO +NM_001039126_Asb1 chr1 93437143 93461729 + chr1 91496155 91496319 1940824 1940824 D NO +NM_001039126_Asb1 chr1 93437143 93461729 + chr1 91496003 91496145 1940998 1940998 D NO +NM_001039472_Kif21b chr1 138027986 138074578 + chr1 138437726 138437860 363148 409740 U NO +NM_001039472_Kif21b chr1 138027986 138074578 + chr1 136956468 136956598 1071388 1071388 D NO +NM_001039472_Kif21b chr1 138027986 138074578 + chr1 135851853 135852218 2175768 2175768 D NO +NM_001039472_Kif21b chr1 138027986 138074578 + chr1 140381656 140381785 2307078 2353670 U NO +NM_001039475_Slco6b1 chr1 98802763 98894139 - chr1 95186508 95186637 3616126 3707502 U NO +NM_001039475_Slco6b1 chr1 98802763 98894139 - chr1 92070253 92070431 6732332 6823708 U NO +NM_001039475_Slco6b1 chr1 98802763 98894139 - chr1 91496155 91496319 7306444 7397820 U NO +NM_001039475_Slco6b1 chr1 98802763 98894139 - chr1 91496003 91496145 7306618 7397994 U NO +NM_001039482_Klhl20 chr1 163018528 163061699 - chr1 163827897 163828062 766198 766198 D NO +NM_001039482_Klhl20 chr1 163018528 163061699 - chr1 164215623 164215935 1153924 1153924 D NO +NM_001039482_Klhl20 chr1 163018528 163061699 - chr1 159240736 159240866 3777662 3820833 U NO +NM_001039482_Klhl20 chr1 163018528 163061699 - chr1 167222964 167223261 4161265 4161265 D NO +NM_001039483_Tmco1 chr1 169238419 169279112 + chr1 170255081 170255260 975969 1016662 U NO +NM_001039483_Tmco1 chr1 169238419 169279112 + chr1 167906284 167906554 1331865 1331865 D NO +NM_001039483_Tmco1 chr1 169238419 169279112 + chr1 167222964 167223261 2015158 2015158 D NO +NM_001039483_Tmco1 chr1 169238419 169279112 + chr1 172620779 172620912 3341667 3382360 U NO +NM_001039484_Kcnj10 chr1 174258852 174304216 + chr1 174376470 174376659 72254 117618 U NO +NM_001039484_Kcnj10 chr1 174258852 174304216 + chr1 172620917 172621080 1637772 1637772 D NO +NM_001039484_Kcnj10 chr1 174258852 174304216 + chr1 172620779 172620912 1637940 1637940 D NO +NM_001039484_Kcnj10 chr1 174258852 174304216 + chr1 170255081 170255260 4003592 4003592 D NO +NM_001039493_Plekhm3 chr1 64832557 65032270 - chr1 63664888 63665018 1167539 1367252 U NO +NM_001039493_Plekhm3 chr1 64832557 65032270 - chr1 72769824 72770056 7737554 7737554 D NO +NM_001039493_Plekhm3 chr1 64832557 65032270 - chr1 72770058 72770226 7737788 7737788 D NO +NM_001039493_Plekhm3 chr1 64832557 65032270 - chr1 72815517 72815742 7783247 7783247 D NO +NM_001039495_Ccdc108 chr1 74947239 74982168 - chr1 75481920 75482054 499752 499752 D NO +NM_001039495_Ccdc108 chr1 74947239 74982168 - chr1 72815517 72815742 2131497 2166426 U NO +NM_001039495_Ccdc108 chr1 74947239 74982168 - chr1 72770058 72770226 2177013 2211942 U NO +NM_001039495_Ccdc108 chr1 74947239 74982168 - chr1 72769824 72770056 2177183 2212112 U NO +NM_001039509_Pnkd chr1 74331504 74400245 + chr1 75481920 75482054 1081675 1150416 U NO +NM_001039509_Pnkd chr1 74331504 74400245 + chr1 72815517 72815742 1515762 1515762 D NO +NM_001039509_Pnkd chr1 74331504 74400245 + chr1 72770058 72770226 1561278 1561278 D NO +NM_001039509_Pnkd chr1 74331504 74400245 + chr1 72769824 72770056 1561448 1561448 D NO +NM_001039710_Coq10b chr1 55101051 55129538 + chr1 55283572 55283675 154034 182521 U NO +NM_001039710_Coq10b chr1 55101051 55129538 + chr1 54631692 54631815 469236 469236 D NO +NM_001039710_Coq10b chr1 55101051 55129538 + chr1 52625416 52625560 2475491 2475491 D NO +NM_001039710_Coq10b chr1 55101051 55129538 + chr1 63664888 63665018 8535350 8563837 U NO +NM_001039934_Mtap2 chr1 66187374 66489157 + chr1 63664888 63665018 2522356 2522356 D NO +NM_001039934_Mtap2 chr1 66187374 66489157 + chr1 72769824 72770056 6280667 6582450 U NO +NM_001039934_Mtap2 chr1 66187374 66489157 + chr1 72770058 72770226 6280901 6582684 U NO +NM_001039934_Mtap2 chr1 66187374 66489157 + chr1 72815517 72815742 6326360 6628143 U NO +NM_001042634_Clk1 chr1 58467034 58480936 - chr1 55283572 55283675 3183359 3197261 U NO +NM_001042634_Clk1 chr1 58467034 58480936 - chr1 54631692 54631815 3835219 3849121 U NO +NM_001042634_Clk1 chr1 58467034 58480936 - chr1 63664888 63665018 5183952 5183952 D NO +NM_001042634_Clk1 chr1 58467034 58480936 - chr1 52625416 52625560 5841474 5855376 U NO +NM_001045481_Ifi203 chr1 175804708 175928457 - chr1 174376470 174376659 1428049 1551798 U NO +NM_001045481_Ifi203 chr1 175804708 175928457 - chr1 172620917 172621080 3183628 3307377 U NO +NM_001045481_Ifi203 chr1 175804708 175928457 - chr1 172620779 172620912 3183796 3307545 U NO +NM_001045481_Ifi203 chr1 175804708 175928457 - chr1 181061299 181061446 5132842 5132842 D NO +NM_001077189_Fcgr2b chr1 172890316 172916060 - chr1 172620917 172621080 269236 294980 U NO +NM_001077189_Fcgr2b chr1 172890316 172916060 - chr1 172620779 172620912 269404 295148 U NO +NM_001077189_Fcgr2b chr1 172890316 172916060 - chr1 174376470 174376659 1460410 1460410 D NO +NM_001077189_Fcgr2b chr1 172890316 172916060 - chr1 170255081 170255260 2635056 2660800 U NO +NM_001077353_Gsta3 chr1 21230690 21255722 + chr1 24609562 24609623 3353840 3378872 U NO +NM_001077353_Gsta3 chr1 21230690 21255722 + chr1 24609923 24609992 3354201 3379233 U NO +NM_001077353_Gsta3 chr1 21230690 21255722 + chr1 24730996 24731077 3475274 3500306 U NO +NM_001077353_Gsta3 chr1 21230690 21255722 + chr1 17030405 17030545 4200145 4200145 D NO +NM_001077403_Nrp2 chr1 62724499 63100251 + chr1 63664888 63665018 564637 940389 U NO +NM_001077403_Nrp2 chr1 62724499 63100251 + chr1 55283572 55283675 7440824 7440824 D NO +NM_001077403_Nrp2 chr1 62724499 63100251 + chr1 54631692 54631815 8092684 8092684 D NO +NM_001077403_Nrp2 chr1 62724499 63100251 + chr1 72769824 72770056 9669573 10045325 U NO +NM_001081023_Cacna1s chr1 137949297 138016348 + chr1 138437726 138437860 421378 488429 U NO +NM_001081023_Cacna1s chr1 137949297 138016348 + chr1 136956468 136956598 992699 992699 D NO +NM_001081023_Cacna1s chr1 137949297 138016348 + chr1 135851853 135852218 2097079 2097079 D NO +NM_001081023_Cacna1s chr1 137949297 138016348 + chr1 135582677 135582828 2366469 2366469 D NO +NM_001081078_Lct chr1 130174327 130224881 - chr1 132950929 132951247 2726048 2726048 D NO +NM_001081078_Lct chr1 130174327 130224881 - chr1 133114860 133115015 2889979 2889979 D NO +NM_001081078_Lct chr1 130174327 130224881 - chr1 135582677 135582828 5357796 5357796 D NO +NM_001081078_Lct chr1 130174327 130224881 - chr1 135851853 135852218 5626972 5626972 D NO +NM_001081079_Ogfrl1 chr1 23278472 23451348 - chr1 24609562 24609623 1158214 1158214 D NO +NM_001081079_Ogfrl1 chr1 23278472 23451348 - chr1 24609923 24609992 1158575 1158575 D NO +NM_001081079_Ogfrl1 chr1 23278472 23451348 - chr1 24730996 24731077 1279648 1279648 D NO +NM_001081079_Ogfrl1 chr1 23278472 23451348 - chr1 26734195 26734485 3282847 3282847 D NO +NM_001081259_Mfsd7b chr1 192825304 192850534 - chr1 194258648 194259032 1408114 1408114 D NO +NM_001081259_Mfsd7b chr1 192825304 192850534 - chr1 194645118 194645475 1794584 1794584 D NO +NM_001081259_Mfsd7b chr1 192825304 192850534 - chr1 194957396 194957723 2106862 2106862 D NO +NM_001081259_Mfsd7b chr1 192825304 192850534 - chr1 195324443 195324741 2473909 2473909 D NO +NM_001081275_1700009P17Rik chr1 173032694 173057075 + chr1 172620917 172621080 411614 411614 D NO +NM_001081275_1700009P17Rik chr1 173032694 173057075 + chr1 172620779 172620912 411782 411782 D NO +NM_001081275_1700009P17Rik chr1 173032694 173057075 + chr1 174376470 174376659 1319395 1343776 U NO +NM_001081275_1700009P17Rik chr1 173032694 173057075 + chr1 170255081 170255260 2777434 2777434 D NO +NM_001081361_Mosc1 chr1 186610666 186635172 - chr1 185854947 185855105 755561 780067 U NO +NM_001081361_Mosc1 chr1 186610666 186635172 - chr1 182479646 182479905 4130761 4155267 U NO +NM_001081361_Mosc1 chr1 186610666 186635172 - chr1 181061299 181061446 5549220 5573726 U NO +NM_001081361_Mosc1 chr1 186610666 186635172 - chr1 194258648 194259032 7623476 7623476 D NO +NM_001081756_E030049G20Rik chr1 128277776 128727190 - chr1 132950929 132951247 4223739 4223739 D NO +NM_001081756_E030049G20Rik chr1 128277776 128727190 - chr1 133114860 133115015 4387670 4387670 D NO +NM_001081756_E030049G20Rik chr1 128277776 128727190 - chr1 135582677 135582828 6855487 6855487 D NO +NM_001081756_E030049G20Rik chr1 128277776 128727190 - chr1 135851853 135852218 7124663 7124663 D NO +NM_001082573_Crygc chr1 65118108 65146863 - chr1 63664888 63665018 1453090 1481845 U NO +NM_001082573_Crygc chr1 65118108 65146863 - chr1 72769824 72770056 7622961 7622961 D NO +NM_001082573_Crygc chr1 65118108 65146863 - chr1 72770058 72770226 7623195 7623195 D NO +NM_001082573_Crygc chr1 65118108 65146863 - chr1 72815517 72815742 7668654 7668654 D NO +NM_001083897_Mpzl1 chr1 167522314 167564669 - chr1 167222964 167223261 299053 341408 U NO +NM_001083897_Mpzl1 chr1 167522314 167564669 - chr1 167906284 167906554 341615 341615 D NO +NM_001083897_Mpzl1 chr1 167522314 167564669 - chr1 170255081 170255260 2690412 2690412 D NO +NM_001083897_Mpzl1 chr1 167522314 167564669 - chr1 164215623 164215935 3306379 3348734 U NO +NM_001085409_Steap3 chr1 122037552 122169282 - chr1 120760212 120760461 1277091 1408821 U NO +NM_001085409_Steap3 chr1 122037552 122169282 - chr1 132950929 132951247 10781647 10781647 D NO +NM_001085409_Steap3 chr1 122037552 122169282 - chr1 133114860 133115015 10945578 10945578 D NO +NM_001085409_Steap3 chr1 122037552 122169282 - chr1 135582677 135582828 13413395 13413395 D NO +NM_001099637_Cep170 chr1 178663793 178744307 - chr1 181061299 181061446 2316992 2316992 D NO +NM_001099637_Cep170 chr1 178663793 178744307 - chr1 182479646 182479905 3735339 3735339 D NO +NM_001099637_Cep170 chr1 178663793 178744307 - chr1 174376470 174376659 4287134 4367648 U NO +NM_001099637_Cep170 chr1 178663793 178744307 - chr1 172620917 172621080 6042713 6123227 U NO +NM_001103182_Lin9 chr1 182572002 182620816 + chr1 182479646 182479905 92097 92097 D NO +NM_001103182_Lin9 chr1 182572002 182620816 + chr1 181061299 181061446 1510556 1510556 D NO +NM_001103182_Lin9 chr1 182572002 182620816 + chr1 185854947 185855105 3234131 3282945 U NO +NM_001103182_Lin9 chr1 182572002 182620816 + chr1 174376470 174376659 8195343 8195343 D NO +NM_001105667_Dtymk chr1 95689006 95698492 - chr1 95186508 95186637 502369 511855 U NO +NM_001105667_Dtymk chr1 95689006 95698492 - chr1 92070253 92070431 3618575 3628061 U NO +NM_001105667_Dtymk chr1 95689006 95698492 - chr1 91496155 91496319 4192687 4202173 U NO +NM_001105667_Dtymk chr1 95689006 95698492 - chr1 91496003 91496145 4192861 4202347 U NO +NM_001110783_Ank1 chr1 77759424 77766452 - chr1 77457642 77457791 301633 308661 U NO +NM_001110783_Ank1 chr1 77759424 77766452 - chr1 78630893 78631160 864441 864441 D NO +NM_001110783_Ank1 chr1 77759424 77766452 - chr1 75481920 75482054 2277370 2284398 U NO +NM_001110783_Ank1 chr1 77759424 77766452 - chr1 72815517 72815742 4943682 4950710 U NO +NM_001110831_Dnpep chr1 75304471 75314673 - chr1 75481920 75482054 167247 167247 D NO +NM_001110831_Dnpep chr1 75304471 75314673 - chr1 77457642 77457791 2142969 2142969 D NO +NM_001110831_Dnpep chr1 75304471 75314673 - chr1 72815517 72815742 2488729 2498931 U NO +NM_001110831_Dnpep chr1 75304471 75314673 - chr1 72770058 72770226 2534245 2544447 U NO +NM_001111059_Cd34 chr1 196683888 196826273 + chr1 197057796 197057843 231523 373908 U NO +NM_001111059_Cd34 chr1 196683888 196826273 + chr1 195384767 195385195 1298693 1298693 D NO +NM_001111059_Cd34 chr1 196683888 196826273 + chr1 195342728 195342985 1340903 1340903 D NO +NM_001111059_Cd34 chr1 196683888 196826273 + chr1 195338316 195338616 1345272 1345272 D NO +NM_001111279_Wdfy1 chr1 79689958 79772698 - chr1 78630893 78631160 1058798 1141538 U NO +NM_001111279_Wdfy1 chr1 79689958 79772698 - chr1 77457642 77457791 2232167 2314907 U NO +NM_001111279_Wdfy1 chr1 79689958 79772698 - chr1 75481920 75482054 4207904 4290644 U NO +NM_001111279_Wdfy1 chr1 79689958 79772698 - chr1 72815517 72815742 6874216 6956956 U NO +NM_001111314_Ngef chr1 89373415 89470499 - chr1 89989553 89989714 519054 519054 D NO +NM_001111314_Ngef chr1 89373415 89470499 - chr1 90412932 90413132 942433 942433 D NO +NM_001111314_Ngef chr1 89373415 89470499 - chr1 88408969 88409267 964148 1061232 U NO +NM_001111314_Ngef chr1 89373415 89470499 - chr1 90592499 90592629 1122000 1122000 D NO +NM_001111316_Ptprc chr1 139959456 140088994 - chr1 140381656 140381785 292662 292662 D NO +NM_001111316_Ptprc chr1 139959456 140088994 - chr1 138437726 138437860 1521596 1651134 U NO +NM_001111316_Ptprc chr1 139959456 140088994 - chr1 136956468 136956598 3002858 3132396 U NO +NM_001111316_Ptprc chr1 139959456 140088994 - chr1 135851853 135852218 4107238 4236776 U NO +NM_001111320_Idh1 chr1 65185668 65233033 - chr1 63664888 63665018 1520650 1568015 U NO +NM_001111320_Idh1 chr1 65185668 65233033 - chr1 72769824 72770056 7536791 7536791 D NO +NM_001111320_Idh1 chr1 65185668 65233033 - chr1 72770058 72770226 7537025 7537025 D NO +NM_001111320_Idh1 chr1 65185668 65233033 - chr1 72815517 72815742 7582484 7582484 D NO +NM_001113394_Cd247 chr1 167711216 167807397 + chr1 167906284 167906554 98887 195068 U NO +NM_001113394_Cd247 chr1 167711216 167807397 + chr1 167222964 167223261 487955 487955 D NO +NM_001113394_Cd247 chr1 167711216 167807397 + chr1 170255081 170255260 2447684 2543865 U NO +NM_001113394_Cd247 chr1 167711216 167807397 + chr1 164215623 164215935 3495281 3495281 D NO +NM_001122685_Rhbdd1 chr1 82313047 82441937 + chr1 78630893 78631160 3681887 3681887 D NO +NM_001122685_Rhbdd1 chr1 82313047 82441937 + chr1 77457642 77457791 4855256 4855256 D NO +NM_001122685_Rhbdd1 chr1 82313047 82441937 + chr1 88408969 88409267 5967032 6095922 U NO +NM_001122685_Rhbdd1 chr1 82313047 82441937 + chr1 75481920 75482054 6830993 6830993 D NO +NM_001126046_Fam178b chr1 36619544 36740008 - chr1 36106813 36107058 512486 632950 U NO +NM_001126046_Fam178b chr1 36619544 36740008 - chr1 34206924 34207100 2412444 2532908 U NO +NM_001126046_Fam178b chr1 36619544 36740008 - chr1 39492140 39492513 2752132 2752132 D NO +NM_001126046_Fam178b chr1 36619544 36740008 - chr1 40325917 40326123 3585909 3585909 D NO +NM_001128605_Psen2 chr1 182157140 182247499 - chr1 182479646 182479905 232147 232147 D NO +NM_001128605_Psen2 chr1 182157140 182247499 - chr1 181061299 181061446 1095694 1186053 U NO +NM_001128605_Psen2 chr1 182157140 182247499 - chr1 185854947 185855105 3607448 3607448 D NO +NM_001128605_Psen2 chr1 182157140 182247499 - chr1 174376470 174376659 7780481 7870840 U NO +NM_001128609_Dedd chr1 173258959 173273620 + chr1 172620917 172621080 637879 637879 D NO +NM_001128609_Dedd chr1 173258959 173273620 + chr1 172620779 172620912 638047 638047 D NO +NM_001128609_Dedd chr1 173258959 173273620 + chr1 174376470 174376659 1102850 1117511 U NO +NM_001128609_Dedd chr1 173258959 173273620 + chr1 170255081 170255260 3003699 3003699 D NO +NM_001130174_Tnnt2 chr1 137732931 137748838 + chr1 138437726 138437860 688888 704795 U NO +NM_001130174_Tnnt2 chr1 137732931 137748838 + chr1 136956468 136956598 776333 776333 D NO +NM_001130174_Tnnt2 chr1 137732931 137748838 + chr1 135851853 135852218 1880713 1880713 D NO +NM_001130174_Tnnt2 chr1 137732931 137748838 + chr1 135582677 135582828 2150103 2150103 D NO +NM_001134829_Lpgat1 chr1 193521144 193605705 + chr1 194258648 194259032 652943 737504 U NO +NM_001134829_Lpgat1 chr1 193521144 193605705 + chr1 194645118 194645475 1039413 1123974 U NO +NM_001134829_Lpgat1 chr1 193521144 193605705 + chr1 194957396 194957723 1351691 1436252 U NO +NM_001134829_Lpgat1 chr1 193521144 193605705 + chr1 195324443 195324741 1718738 1803299 U NO +NM_001136070_Lgtn chr1 133049773 133084235 + chr1 133114860 133115015 30625 65087 U NO +NM_001136070_Lgtn chr1 133049773 133084235 + chr1 132950929 132951247 98526 98526 D NO +NM_001136070_Lgtn chr1 133049773 133084235 + chr1 135582677 135582828 2498442 2532904 U NO +NM_001136070_Lgtn chr1 133049773 133084235 + chr1 135851853 135852218 2767618 2802080 U NO +NM_001142647_Tmem194b chr1 52687569 52708760 + chr1 52625416 52625560 62009 62009 D NO +NM_001142647_Tmem194b chr1 52687569 52708760 + chr1 54631692 54631815 1922932 1944123 U NO +NM_001142647_Tmem194b chr1 52687569 52708760 + chr1 55283572 55283675 2574812 2596003 U NO +NM_001142647_Tmem194b chr1 52687569 52708760 + chr1 44195449 44195639 8491930 8491930 D NO +NM_001159649_Lax1 chr1 135575626 135586665 - chr1 135582677 135582828 0 3837 . YES +NM_001159649_Lax1 chr1 135575626 135586665 - chr1 135851853 135852218 265188 265188 D NO +NM_001159649_Lax1 chr1 135575626 135586665 - chr1 136956468 136956598 1369803 1369803 D NO +NM_001159649_Lax1 chr1 135575626 135586665 - chr1 133114860 133115015 2460611 2471650 U NO +NM_001159719_Sept2 chr1 95375046 95406820 + chr1 95186508 95186637 188409 188409 D NO +NM_001159719_Sept2 chr1 95375046 95406820 + chr1 92070253 92070431 3304615 3304615 D NO +NM_001159719_Sept2 chr1 95375046 95406820 + chr1 91496155 91496319 3878727 3878727 D NO +NM_001159719_Sept2 chr1 95375046 95406820 + chr1 91496003 91496145 3878901 3878901 D NO +NM_001159730_Pdc chr1 152154402 152181077 + chr1 154971572 154971673 2790495 2817170 U NO +NM_001159730_Pdc chr1 152154402 152181077 + chr1 155123313 155123435 2942236 2968911 U NO +NM_001159730_Pdc chr1 152154402 152181077 + chr1 158510523 158510813 6329446 6356121 U NO +NM_001159730_Pdc chr1 152154402 152181077 + chr1 158537267 158537411 6356190 6382865 U NO +NM_007381_Acadl chr1 66861363 66909886 - chr1 63664888 63665018 3196345 3244868 U NO +NM_007381_Acadl chr1 66861363 66909886 - chr1 72769824 72770056 5859938 5859938 D NO +NM_007381_Acadl chr1 66861363 66909886 - chr1 72770058 72770226 5860172 5860172 D NO +NM_007381_Acadl chr1 66861363 66909886 - chr1 72815517 72815742 5905631 5905631 D NO +NM_007415_Parp1 chr1 182499033 182531385 + chr1 182479646 182479905 19128 19128 D NO +NM_007415_Parp1 chr1 182499033 182531385 + chr1 181061299 181061446 1437587 1437587 D NO +NM_007415_Parp1 chr1 182499033 182531385 + chr1 185854947 185855105 3323562 3355914 U NO +NM_007415_Parp1 chr1 182499033 182531385 + chr1 174376470 174376659 8122374 8122374 D NO +NM_007422_Adss chr1 179693113 179888685 - chr1 181061299 181061446 1172614 1172614 D NO +NM_007422_Adss chr1 179693113 179888685 - chr1 182479646 182479905 2590961 2590961 D NO +NM_007422_Adss chr1 179693113 179888685 - chr1 174376470 174376659 5316454 5512026 U NO +NM_007422_Adss chr1 179693113 179888685 - chr1 185854947 185855105 5966262 5966262 D NO +NM_007432_Akp3 chr1 89021583 89042994 + chr1 88408969 88409267 612316 612316 D NO +NM_007432_Akp3 chr1 89021583 89042994 + chr1 89989553 89989714 946559 967970 U NO +NM_007432_Akp3 chr1 89021583 89042994 + chr1 90412932 90413132 1369938 1391349 U NO +NM_007432_Akp3 chr1 89021583 89042994 + chr1 90592499 90592629 1549505 1570916 U NO +NM_007433_Akp5 chr1 88983274 88986861 - chr1 88408969 88409267 574007 577594 U NO +NM_007433_Akp5 chr1 88983274 88986861 - chr1 89989553 89989714 1002692 1002692 D NO +NM_007433_Akp5 chr1 88983274 88986861 - chr1 90412932 90413132 1426071 1426071 D NO +NM_007433_Akp5 chr1 88983274 88986861 - chr1 90592499 90592629 1605638 1605638 D NO +NM_007453_Prdx6 chr1 163170243 163210238 - chr1 163827897 163828062 617659 617659 D NO +NM_007453_Prdx6 chr1 163170243 163210238 - chr1 164215623 164215935 1005385 1005385 D NO +NM_007453_Prdx6 chr1 163170243 163210238 - chr1 159240736 159240866 3929377 3969372 U NO +NM_007453_Prdx6 chr1 163170243 163210238 - chr1 167222964 167223261 4012726 4012726 D NO +NM_007463_Speg chr1 75371872 75428879 + chr1 75481920 75482054 53041 110048 U NO +NM_007463_Speg chr1 75371872 75428879 + chr1 77457642 77457791 2028763 2085770 U NO +NM_007463_Speg chr1 75371872 75428879 + chr1 72815517 72815742 2556130 2556130 D NO +NM_007463_Speg chr1 75371872 75428879 + chr1 72770058 72770226 2601646 2601646 D NO +NM_007495_Astn1 chr1 160292424 160626748 + chr1 159240736 159240866 1051558 1051558 D NO +NM_007495_Astn1 chr1 160292424 160626748 + chr1 158835251 158835391 1457033 1457033 D NO +NM_007495_Astn1 chr1 160292424 160626748 + chr1 158580638 158580759 1711665 1711665 D NO +NM_007495_Astn1 chr1 160292424 160626748 + chr1 158537267 158537411 1755013 1755013 D NO +NM_007498_Atf3 chr1 192994178 193057173 - chr1 194258648 194259032 1201475 1201475 D NO +NM_007498_Atf3 chr1 192994178 193057173 - chr1 194645118 194645475 1587945 1587945 D NO +NM_007498_Atf3 chr1 192994178 193057173 - chr1 194957396 194957723 1900223 1900223 D NO +NM_007498_Atf3 chr1 192994178 193057173 - chr1 195324443 195324741 2267270 2267270 D NO +NM_007525_Bard1 chr1 71076934 71149526 - chr1 72769824 72770056 1620298 1620298 D NO +NM_007525_Bard1 chr1 71076934 71149526 - chr1 72770058 72770226 1620532 1620532 D NO +NM_007525_Bard1 chr1 71076934 71149526 - chr1 72815517 72815742 1665991 1665991 D NO +NM_007525_Bard1 chr1 71076934 71149526 - chr1 75481920 75482054 4332394 4332394 D NO +NM_007561_Bmpr2 chr1 59820296 59927706 + chr1 63664888 63665018 3737182 3844592 U NO +NM_007561_Bmpr2 chr1 59820296 59927706 + chr1 55283572 55283675 4536621 4536621 D NO +NM_007561_Bmpr2 chr1 59820296 59927706 + chr1 54631692 54631815 5188481 5188481 D NO +NM_007561_Bmpr2 chr1 59820296 59927706 + chr1 52625416 52625560 7194736 7194736 D NO +NM_007570_Btg2 chr1 135971251 135991759 - chr1 135851853 135852218 119033 139541 U NO +NM_007570_Btg2 chr1 135971251 135991759 - chr1 135582677 135582828 388423 408931 U NO +NM_007570_Btg2 chr1 135971251 135991759 - chr1 136956468 136956598 964709 964709 D NO +NM_007570_Btg2 chr1 135971251 135991759 - chr1 138437726 138437860 2445967 2445967 D NO +NM_007576_C4bp chr1 132531357 132558199 - chr1 132950929 132951247 392730 392730 D NO +NM_007576_C4bp chr1 132531357 132558199 - chr1 133114860 133115015 556661 556661 D NO +NM_007576_C4bp chr1 132531357 132558199 - chr1 135582677 135582828 3024478 3024478 D NO +NM_007576_C4bp chr1 132531357 132558199 - chr1 135851853 135852218 3293654 3293654 D NO +NM_007642_Cd28 chr1 60763315 60830749 + chr1 63664888 63665018 2834139 2901573 U NO +NM_007642_Cd28 chr1 60763315 60830749 + chr1 55283572 55283675 5479640 5479640 D NO +NM_007642_Cd28 chr1 60763315 60830749 + chr1 54631692 54631815 6131500 6131500 D NO +NM_007642_Cd28 chr1 60763315 60830749 + chr1 52625416 52625560 8137755 8137755 D NO +NM_007649_Cd48 chr1 173603288 173635385 + chr1 174376470 174376659 741085 773182 U NO +NM_007649_Cd48 chr1 173603288 173635385 + chr1 172620917 172621080 982208 982208 D NO +NM_007649_Cd48 chr1 173603288 173635385 + chr1 172620779 172620912 982376 982376 D NO +NM_007649_Cd48 chr1 173603288 173635385 + chr1 170255081 170255260 3348028 3348028 D NO +NM_007685_Cfc1 chr1 34592493 34601156 + chr1 34206924 34207100 385393 385393 D NO +NM_007685_Cfc1 chr1 34592493 34601156 + chr1 36106813 36107058 1505657 1514320 U NO +NM_007685_Cfc1 chr1 34592493 34601156 + chr1 39492140 39492513 4890984 4899647 U NO +NM_007685_Cfc1 chr1 34592493 34601156 + chr1 40325917 40326123 5724761 5733424 U NO +NM_007695_Chi3l1 chr1 136069840 136086738 + chr1 135851853 135852218 217622 217622 D NO +NM_007695_Chi3l1 chr1 136069840 136086738 + chr1 135582677 135582828 487012 487012 D NO +NM_007695_Chi3l1 chr1 136069840 136086738 + chr1 136956468 136956598 869730 886628 U NO +NM_007695_Chi3l1 chr1 136069840 136086738 + chr1 138437726 138437860 2350988 2367886 U NO +NM_007722_Cxcr7 chr1 92100063 92112863 + chr1 92070253 92070431 29632 29632 D NO +NM_007722_Cxcr7 chr1 92100063 92112863 + chr1 91496155 91496319 603744 603744 D NO +NM_007722_Cxcr7 chr1 92100063 92112863 + chr1 91496003 91496145 603918 603918 D NO +NM_007722_Cxcr7 chr1 92100063 92112863 + chr1 90592499 90592629 1507434 1507434 D NO +NM_007733_Col19a1 chr1 24258667 24602262 - chr1 24609562 24609623 7300 7300 D NO +NM_007733_Col19a1 chr1 24258667 24602262 - chr1 24609923 24609992 7661 7661 D NO +NM_007733_Col19a1 chr1 24258667 24602262 - chr1 24730996 24731077 128734 128734 D NO +NM_007733_Col19a1 chr1 24258667 24602262 - chr1 26734195 26734485 2131933 2131933 D NO +NM_007734_Col4a3 chr1 82583506 82718629 + chr1 78630893 78631160 3952346 3952346 D NO +NM_007734_Col4a3 chr1 82583506 82718629 + chr1 77457642 77457791 5125715 5125715 D NO +NM_007734_Col4a3 chr1 82583506 82718629 + chr1 88408969 88409267 5690340 5825463 U NO +NM_007734_Col4a3 chr1 82583506 82718629 + chr1 75481920 75482054 7101452 7101452 D NO +NM_007735_Col4a4 chr1 82438140 82584744 - chr1 78630893 78631160 3806980 3953584 U NO +NM_007735_Col4a4 chr1 82438140 82584744 - chr1 77457642 77457791 4980349 5126953 U NO +NM_007735_Col4a4 chr1 82438140 82584744 - chr1 88408969 88409267 5824225 5824225 D NO +NM_007735_Col4a4 chr1 82438140 82584744 - chr1 75481920 75482054 6956086 7102690 U NO +NM_007737_Col5a2 chr1 45431177 45560226 - chr1 44195449 44195639 1235538 1364587 U NO +NM_007737_Col5a2 chr1 45431177 45560226 - chr1 40325917 40326123 5105054 5234103 U NO +NM_007737_Col5a2 chr1 45431177 45560226 - chr1 39492140 39492513 5938664 6067713 U NO +NM_007737_Col5a2 chr1 45431177 45560226 - chr1 52625416 52625560 7065190 7065190 D NO +NM_007740_Col9a1 chr1 24164692 24268636 + chr1 24609562 24609623 340926 444870 U NO +NM_007740_Col9a1 chr1 24164692 24268636 + chr1 24609923 24609992 341287 445231 U NO +NM_007740_Col9a1 chr1 24164692 24268636 + chr1 24730996 24731077 462360 566304 U NO +NM_007740_Col9a1 chr1 24164692 24268636 + chr1 26734195 26734485 2465559 2569503 U NO +NM_007758_Cr2 chr1 196963005 197003002 - chr1 197057796 197057843 54794 54794 D NO +NM_007758_Cr2 chr1 196963005 197003002 - chr1 195384767 195385195 1577810 1617807 U NO +NM_007758_Cr2 chr1 196963005 197003002 - chr1 195342728 195342985 1620020 1660017 U NO +NM_007758_Cr2 chr1 196963005 197003002 - chr1 195338316 195338616 1624389 1664386 U NO +NM_007768_Crp chr1 174620782 174763152 + chr1 174376470 174376659 244123 244123 D NO +NM_007768_Crp chr1 174620782 174763152 + chr1 172620917 172621080 1999702 1999702 D NO +NM_007768_Crp chr1 174620782 174763152 + chr1 172620779 172620912 1999870 1999870 D NO +NM_007768_Crp chr1 174620782 174763152 + chr1 170255081 170255260 4365522 4365522 D NO +NM_007774_Cryga chr1 65146986 65150012 - chr1 63664888 63665018 1481968 1484994 U NO +NM_007774_Cryga chr1 65146986 65150012 - chr1 72769824 72770056 7619812 7619812 D NO +NM_007774_Cryga chr1 65146986 65150012 - chr1 72770058 72770226 7620046 7620046 D NO +NM_007774_Cryga chr1 65146986 65150012 - chr1 72815517 72815742 7665505 7665505 D NO +NM_007776_Crygd chr1 65108417 65110024 - chr1 63664888 63665018 1443399 1445006 U NO +NM_007776_Crygd chr1 65108417 65110024 - chr1 72769824 72770056 7659800 7659800 D NO +NM_007776_Crygd chr1 65108417 65110024 - chr1 72770058 72770226 7660034 7660034 D NO +NM_007776_Crygd chr1 65108417 65110024 - chr1 72815517 72815742 7705493 7705493 D NO +NM_007777_Cryge chr1 65095133 65097767 - chr1 63664888 63665018 1430115 1432749 U NO +NM_007777_Cryge chr1 65095133 65097767 - chr1 72769824 72770056 7672057 7672057 D NO +NM_007777_Cryge chr1 65095133 65097767 - chr1 72770058 72770226 7672291 7672291 D NO +NM_007777_Cryge chr1 65095133 65097767 - chr1 72815517 72815742 7717750 7717750 D NO +NM_007791_Csrp1 chr1 137526251 137648807 + chr1 136956468 136956598 569653 569653 D NO +NM_007791_Csrp1 chr1 137526251 137648807 + chr1 138437726 138437860 788919 911475 U NO +NM_007791_Csrp1 chr1 137526251 137648807 + chr1 135851853 135852218 1674033 1674033 D NO +NM_007791_Csrp1 chr1 137526251 137648807 + chr1 135582677 135582828 1943423 1943423 D NO +NM_007799_Ctse chr1 133534879 133572077 + chr1 133114860 133115015 419864 419864 D NO +NM_007799_Ctse chr1 133534879 133572077 + chr1 132950929 132951247 583632 583632 D NO +NM_007799_Ctse chr1 133534879 133572077 + chr1 135582677 135582828 2010600 2047798 U NO +NM_007799_Ctse chr1 133534879 133572077 + chr1 135851853 135852218 2279776 2316974 U NO +NM_007827_Daf2 chr1 132285116 132319576 - chr1 132950929 132951247 631353 631353 D NO +NM_007827_Daf2 chr1 132285116 132319576 - chr1 133114860 133115015 795284 795284 D NO +NM_007827_Daf2 chr1 132285116 132319576 - chr1 135582677 135582828 3263101 3263101 D NO +NM_007827_Daf2 chr1 132285116 132319576 - chr1 135851853 135852218 3532277 3532277 D NO +NM_007842_Dhx9 chr1 155302618 155334755 - chr1 155123313 155123435 179183 211320 U NO +NM_007842_Dhx9 chr1 155302618 155334755 - chr1 154971572 154971673 330945 363082 U NO +NM_007842_Dhx9 chr1 155302618 155334755 - chr1 158510523 158510813 3175768 3175768 D NO +NM_007842_Dhx9 chr1 155302618 155334755 - chr1 158537267 158537411 3202512 3202512 D NO +NM_007853_Degs1 chr1 184205901 184212915 - chr1 185854947 185855105 1642032 1642032 D NO +NM_007853_Degs1 chr1 184205901 184212915 - chr1 182479646 182479905 1725996 1733010 U NO +NM_007853_Degs1 chr1 184205901 184212915 - chr1 181061299 181061446 3144455 3151469 U NO +NM_007853_Degs1 chr1 184205901 184212915 - chr1 174376470 174376659 9829242 9836256 U NO +NM_007921_Elf3 chr1 137149649 137155139 - chr1 136956468 136956598 193051 198541 U NO +NM_007921_Elf3 chr1 137149649 137155139 - chr1 138437726 138437860 1282587 1282587 D NO +NM_007921_Elf3 chr1 137149649 137155139 - chr1 135851853 135852218 1297431 1302921 U NO +NM_007921_Elf3 chr1 137149649 137155139 - chr1 135582677 135582828 1566821 1572311 U NO +NM_007923_Elk4 chr1 133904204 133929189 + chr1 133114860 133115015 789189 789189 D NO +NM_007923_Elk4 chr1 133904204 133929189 + chr1 132950929 132951247 952957 952957 D NO +NM_007923_Elk4 chr1 133904204 133929189 + chr1 135582677 135582828 1653488 1678473 U NO +NM_007923_Elk4 chr1 133904204 133929189 + chr1 135851853 135852218 1922664 1947649 U NO +NM_007936_Epha4 chr1 77280640 77511653 - chr1 77457642 77457791 0 53862 . YES +NM_007936_Epha4 chr1 77280640 77511653 - chr1 78630893 78631160 1119240 1119240 D NO +NM_007936_Epha4 chr1 77280640 77511653 - chr1 75481920 75482054 1798586 2029599 U NO +NM_007936_Epha4 chr1 77280640 77511653 - chr1 72815517 72815742 4464898 4695911 U NO +NM_007955_Ptprv chr1 137004306 137029151 - chr1 136956468 136956598 47708 72553 U NO +NM_007955_Ptprv chr1 137004306 137029151 - chr1 135851853 135852218 1152088 1176933 U NO +NM_007955_Ptprv chr1 137004306 137029151 - chr1 138437726 138437860 1408575 1408575 D NO +NM_007955_Ptprv chr1 137004306 137029151 - chr1 135582677 135582828 1421478 1446323 U NO +NM_007976_F5 chr1 166081877 166150388 + chr1 167222964 167223261 1072576 1141087 U NO +NM_007976_F5 chr1 166081877 166150388 + chr1 167906284 167906554 1755896 1824407 U NO +NM_007976_F5 chr1 166081877 166150388 + chr1 164215623 164215935 1865942 1865942 D NO +NM_007976_F5 chr1 166081877 166150388 + chr1 163827897 163828062 2253815 2253815 D NO +NM_008030_Fmo3 chr1 164883934 164914811 - chr1 164215623 164215935 667999 698876 U NO +NM_008030_Fmo3 chr1 164883934 164914811 - chr1 163827897 163828062 1055872 1086749 U NO +NM_008030_Fmo3 chr1 164883934 164914811 - chr1 167222964 167223261 2308153 2308153 D NO +NM_008030_Fmo3 chr1 164883934 164914811 - chr1 167906284 167906554 2991473 2991473 D NO +NM_008057_Fzd7 chr1 59538966 59546428 + chr1 63664888 63665018 4118460 4125922 U NO +NM_008057_Fzd7 chr1 59538966 59546428 + chr1 55283572 55283675 4255291 4255291 D NO +NM_008057_Fzd7 chr1 59538966 59546428 + chr1 54631692 54631815 4907151 4907151 D NO +NM_008057_Fzd7 chr1 59538966 59546428 + chr1 52625416 52625560 6913406 6913406 D NO +NM_008059_G0s2 chr1 195098362 195108977 - chr1 194957396 194957723 140639 151254 U NO +NM_008059_G0s2 chr1 195098362 195108977 - chr1 195324443 195324741 215466 215466 D NO +NM_008059_G0s2 chr1 195098362 195108977 - chr1 195330701 195330930 221724 221724 D NO +NM_008059_G0s2 chr1 195098362 195108977 - chr1 195338316 195338616 229339 229339 D NO +NM_008131_Glul chr1 155746721 155757023 + chr1 155123313 155123435 623286 623286 D NO +NM_008131_Glul chr1 155746721 155757023 + chr1 154971572 154971673 775048 775048 D NO +NM_008131_Glul chr1 155746721 155757023 + chr1 158510523 158510813 2753500 2763802 U NO +NM_008131_Glul chr1 155746721 155757023 + chr1 158537267 158537411 2780244 2790546 U NO +NM_008132_Glrp1 chr1 90396446 90406631 - chr1 90412932 90413132 6301 6301 D NO +NM_008132_Glrp1 chr1 90396446 90406631 - chr1 90592499 90592629 185868 185868 D NO +NM_008132_Glrp1 chr1 90396446 90406631 - chr1 89989553 89989714 406732 416917 U NO +NM_008132_Glrp1 chr1 90396446 90406631 - chr1 91496003 91496145 1089372 1089372 D NO +NM_008209_Mr1 chr1 156951231 157006024 - chr1 158510523 158510813 1504499 1504499 D NO +NM_008209_Mr1 chr1 156951231 157006024 - chr1 158537267 158537411 1531243 1531243 D NO +NM_008209_Mr1 chr1 156951231 157006024 - chr1 158580638 158580759 1574614 1574614 D NO +NM_008209_Mr1 chr1 156951231 157006024 - chr1 158835251 158835391 1829227 1829227 D NO +NM_008210_H3f3a chr1 182694052 182744054 - chr1 182479646 182479905 214147 264149 U NO +NM_008210_H3f3a chr1 182694052 182744054 - chr1 181061299 181061446 1632606 1682608 U NO +NM_008210_H3f3a chr1 182694052 182744054 - chr1 185854947 185855105 3110893 3110893 D NO +NM_008210_H3f3a chr1 182694052 182744054 - chr1 174376470 174376659 8317393 8367395 U NO +NM_008250_Hlx chr1 186542564 186592227 - chr1 185854947 185855105 687459 737122 U NO +NM_008250_Hlx chr1 186542564 186592227 - chr1 182479646 182479905 4062659 4112322 U NO +NM_008250_Hlx chr1 186542564 186592227 - chr1 181061299 181061446 5481118 5530781 U NO +NM_008250_Hlx chr1 186542564 186592227 - chr1 194258648 194259032 7666421 7666421 D NO +NM_008288_Hsd11b1 chr1 195047814 195090228 - chr1 194957396 194957723 90091 132505 U NO +NM_008288_Hsd11b1 chr1 195047814 195090228 - chr1 195324443 195324741 234215 234215 D NO +NM_008288_Hsd11b1 chr1 195047814 195090228 - chr1 195330701 195330930 240473 240473 D NO +NM_008288_Hsd11b1 chr1 195047814 195090228 - chr1 195338316 195338616 248088 248088 D NO +NM_008299_Dnajb3 chr1 90101307 90102337 - chr1 89989553 89989714 111593 112623 U NO +NM_008299_Dnajb3 chr1 90101307 90102337 - chr1 90412932 90413132 310595 310595 D NO +NM_008299_Dnajb3 chr1 90101307 90102337 - chr1 90592499 90592629 490162 490162 D NO +NM_008299_Dnajb3 chr1 90101307 90102337 - chr1 91496003 91496145 1393666 1393666 D NO +NM_008311_Htr2b chr1 87995611 88008576 - chr1 88408969 88409267 400393 400393 D NO +NM_008311_Htr2b chr1 87995611 88008576 - chr1 89989553 89989714 1980977 1980977 D NO +NM_008311_Htr2b chr1 87995611 88008576 - chr1 90412932 90413132 2404356 2404356 D NO +NM_008311_Htr2b chr1 87995611 88008576 - chr1 90592499 90592629 2583923 2583923 D NO +NM_008327_Ifi202b chr1 175892699 175912872 - chr1 174376470 174376659 1516040 1536213 U NO +NM_008327_Ifi202b chr1 175892699 175912872 - chr1 172620917 172621080 3271619 3291792 U NO +NM_008327_Ifi202b chr1 175892699 175912872 - chr1 172620779 172620912 3271787 3291960 U NO +NM_008327_Ifi202b chr1 175892699 175912872 - chr1 181061299 181061446 5148427 5148427 D NO +NM_008329_Ifi204 chr1 175677424 175929523 - chr1 174376470 174376659 1300765 1552864 U NO +NM_008329_Ifi204 chr1 175677424 175929523 - chr1 172620917 172621080 3056344 3308443 U NO +NM_008329_Ifi204 chr1 175677424 175929523 - chr1 172620779 172620912 3056512 3308611 U NO +NM_008329_Ifi204 chr1 175677424 175929523 - chr1 181061299 181061446 5131776 5131776 D NO +NM_008342_Igfbp2 chr1 72840313 72899038 + chr1 72815517 72815742 24571 24571 D NO +NM_008342_Igfbp2 chr1 72840313 72899038 + chr1 72770058 72770226 70087 70087 D NO +NM_008342_Igfbp2 chr1 72840313 72899038 + chr1 72769824 72770056 70257 70257 D NO +NM_008342_Igfbp2 chr1 72840313 72899038 + chr1 75481920 75482054 2582882 2641607 U NO +NM_008362_Il1r1 chr1 40274145 40373439 + chr1 40325917 40326123 0 51772 . YES +NM_008362_Il1r1 chr1 40274145 40373439 + chr1 39492140 39492513 781632 781632 D NO +NM_008362_Il1r1 chr1 40274145 40373439 + chr1 44195449 44195639 3822010 3921304 U NO +NM_008362_Il1r1 chr1 40274145 40373439 + chr1 36106813 36107058 4167087 4167087 D NO +NM_008365_Il18r1 chr1 40522407 40557703 + chr1 40325917 40326123 196284 196284 D NO +NM_008365_Il18r1 chr1 40522407 40557703 + chr1 39492140 39492513 1029894 1029894 D NO +NM_008365_Il18r1 chr1 40522407 40557703 + chr1 44195449 44195639 3637746 3673042 U NO +NM_008365_Il18r1 chr1 40522407 40557703 + chr1 36106813 36107058 4415349 4415349 D NO +NM_008384_Inpp1 chr1 52826936 52890006 - chr1 52625416 52625560 201376 264446 U NO +NM_008384_Inpp1 chr1 52826936 52890006 - chr1 54631692 54631815 1741686 1741686 D NO +NM_008384_Inpp1 chr1 52826936 52890006 - chr1 55283572 55283675 2393566 2393566 D NO +NM_008384_Inpp1 chr1 52826936 52890006 - chr1 44195449 44195639 8631297 8694367 U NO +NM_008429_Kcnj9 chr1 174250632 174259434 - chr1 174376470 174376659 117036 117036 D NO +NM_008429_Kcnj9 chr1 174250632 174259434 - chr1 172620917 172621080 1629552 1638354 U NO +NM_008429_Kcnj9 chr1 174250632 174259434 - chr1 172620779 172620912 1629720 1638522 U NO +NM_008429_Kcnj9 chr1 174250632 174259434 - chr1 170255081 170255260 3995372 4004174 U NO +NM_008440_Kif1a chr1 94912041 94998420 - chr1 95186508 95186637 188088 188088 D NO +NM_008440_Kif1a chr1 94912041 94998420 - chr1 92070253 92070431 2841610 2927989 U NO +NM_008440_Kif1a chr1 94912041 94998420 - chr1 91496155 91496319 3415722 3502101 U NO +NM_008440_Kif1a chr1 94912041 94998420 - chr1 91496003 91496145 3415896 3502275 U NO +NM_008484_Lamb3 chr1 195033913 195170047 + chr1 194957396 194957723 76190 76190 D NO +NM_008484_Lamb3 chr1 195033913 195170047 + chr1 195324443 195324741 154396 290530 U NO +NM_008484_Lamb3 chr1 195033913 195170047 + chr1 195330701 195330930 160654 296788 U NO +NM_008484_Lamb3 chr1 195033913 195170047 + chr1 195338316 195338616 168269 304403 U NO +NM_008485_Lamc2 chr1 154969890 155033557 - chr1 154971572 154971673 0 61884 . YES +NM_008485_Lamc2 chr1 154969890 155033557 - chr1 155123313 155123435 89756 89756 D NO +NM_008485_Lamc2 chr1 154969890 155033557 - chr1 158510523 158510813 3476966 3476966 D NO +NM_008485_Lamc2 chr1 154969890 155033557 - chr1 158537267 158537411 3503710 3503710 D NO +NM_008510_Xcl1 chr1 166861801 166916999 - chr1 167222964 167223261 305965 305965 D NO +NM_008510_Xcl1 chr1 166861801 166916999 - chr1 167906284 167906554 989285 989285 D NO +NM_008510_Xcl1 chr1 166861801 166916999 - chr1 164215623 164215935 2645866 2701064 U NO +NM_008510_Xcl1 chr1 166861801 166916999 - chr1 163827897 163828062 3033739 3088937 U NO +NM_008515_Lrrfip1 chr1 92895314 93025509 + chr1 92070253 92070431 824883 824883 D NO +NM_008515_Lrrfip1 chr1 92895314 93025509 + chr1 91496155 91496319 1398995 1398995 D NO +NM_008515_Lrrfip1 chr1 92895314 93025509 + chr1 91496003 91496145 1399169 1399169 D NO +NM_008515_Lrrfip1 chr1 92895314 93025509 + chr1 95186508 95186637 2160999 2291194 U NO +NM_008534_Ly9 chr1 173518153 173537531 - chr1 174376470 174376659 838939 838939 D NO +NM_008534_Ly9 chr1 173518153 173537531 - chr1 172620917 172621080 897073 916451 U NO +NM_008534_Ly9 chr1 173518153 173537531 - chr1 172620779 172620912 897241 916619 U NO +NM_008534_Ly9 chr1 173518153 173537531 - chr1 170255081 170255260 3262893 3282271 U NO +NM_008551_Mapkapk2 chr1 132950274 133013820 - chr1 132950929 132951247 0 62573 . YES +NM_008551_Mapkapk2 chr1 132950274 133013820 - chr1 133114860 133115015 101040 101040 D NO +NM_008551_Mapkapk2 chr1 132950274 133013820 - chr1 135582677 135582828 2568857 2568857 D NO +NM_008551_Mapkapk2 chr1 132950274 133013820 - chr1 135851853 135852218 2838033 2838033 D NO +NM_008563_Mcm3 chr1 20792654 20810343 - chr1 17030405 17030545 3762109 3779798 U NO +NM_008563_Mcm3 chr1 20792654 20810343 - chr1 24609562 24609623 3799219 3799219 D NO +NM_008563_Mcm3 chr1 20792654 20810343 - chr1 24609923 24609992 3799580 3799580 D NO +NM_008563_Mcm3 chr1 20792654 20810343 - chr1 24730996 24731077 3920653 3920653 D NO +NM_008567_Mcm6 chr1 130228167 130256262 - chr1 132950929 132951247 2694667 2694667 D NO +NM_008567_Mcm6 chr1 130228167 130256262 - chr1 133114860 133115015 2858598 2858598 D NO +NM_008567_Mcm6 chr1 130228167 130256262 - chr1 135582677 135582828 5326415 5326415 D NO +NM_008567_Mcm6 chr1 130228167 130256262 - chr1 135851853 135852218 5595591 5595591 D NO +NM_008575_Mdm4 chr1 134877138 134927144 - chr1 135582677 135582828 655533 655533 D NO +NM_008575_Mdm4 chr1 134877138 134927144 - chr1 135851853 135852218 924709 924709 D NO +NM_008575_Mdm4 chr1 134877138 134927144 - chr1 133114860 133115015 1762123 1812129 U NO +NM_008575_Mdm4 chr1 134877138 134927144 - chr1 132950929 132951247 1925891 1975897 U NO +NM_008623_Mpz chr1 173081953 173091254 + chr1 172620917 172621080 460873 460873 D NO +NM_008623_Mpz chr1 173081953 173091254 + chr1 172620779 172620912 461041 461041 D NO +NM_008623_Mpz chr1 173081953 173091254 + chr1 174376470 174376659 1285216 1294517 U NO +NM_008623_Mpz chr1 173081953 173091254 + chr1 170255081 170255260 2826693 2826693 D NO +NM_008651_Mybl1 chr1 9635825 9690280 - chr1 9619175 9619382 16443 70898 U NO +NM_008651_Mybl1 chr1 9635825 9690280 - chr1 9619046 9619167 16658 71113 U NO +NM_008651_Mybl1 chr1 9635825 9690280 - chr1 10617233 10617437 926953 926953 D NO +NM_008651_Mybl1 chr1 9635825 9690280 - chr1 13829227 13829564 4138947 4138947 D NO +NM_008667_Nab1 chr1 52487127 52611216 - chr1 52625416 52625560 14200 14200 D NO +NM_008667_Nab1 chr1 52487127 52611216 - chr1 54631692 54631815 2020476 2020476 D NO +NM_008667_Nab1 chr1 52487127 52611216 - chr1 55283572 55283675 2672356 2672356 D NO +NM_008667_Nab1 chr1 52487127 52611216 - chr1 44195449 44195639 8291488 8415577 U NO +NM_008678_Ncoa2 chr1 13129206 13399268 - chr1 13829227 13829564 429959 429959 D NO +NM_008678_Ncoa2 chr1 13129206 13399268 - chr1 10617233 10617437 2511769 2781831 U NO +NM_008678_Ncoa2 chr1 13129206 13399268 - chr1 17030405 17030545 3631137 3631137 D NO +NM_008678_Ncoa2 chr1 13129206 13399268 - chr1 9619175 9619382 3509824 3779886 U NO +NM_008696_Map4k4 chr1 39958025 40102235 + chr1 40325917 40326123 223682 367892 U NO +NM_008696_Map4k4 chr1 39958025 40102235 + chr1 39492140 39492513 465512 465512 D NO +NM_008696_Map4k4 chr1 39958025 40102235 + chr1 36106813 36107058 3850967 3850967 D NO +NM_008696_Map4k4 chr1 39958025 40102235 + chr1 44195449 44195639 4093214 4237424 U NO +NM_008719_Npas2 chr1 39250631 39420071 + chr1 39492140 39492513 72069 241509 U NO +NM_008719_Npas2 chr1 39250631 39420071 + chr1 40325917 40326123 905846 1075286 U NO +NM_008719_Npas2 chr1 39250631 39420071 + chr1 36106813 36107058 3143573 3143573 D NO +NM_008719_Npas2 chr1 39250631 39420071 + chr1 44195449 44195639 4775378 4944818 U NO +NM_008763_Olfr16 chr1 174886928 174887857 + chr1 174376470 174376659 510269 510269 D NO +NM_008763_Olfr16 chr1 174886928 174887857 + chr1 172620917 172621080 2265848 2265848 D NO +NM_008763_Olfr16 chr1 174886928 174887857 + chr1 172620779 172620912 2266016 2266016 D NO +NM_008763_Olfr16 chr1 174886928 174887857 + chr1 170255081 170255260 4631668 4631668 D NO +NM_008765_Orc2l chr1 58519275 58561933 - chr1 55283572 55283675 3235600 3278258 U NO +NM_008765_Orc2l chr1 58519275 58561933 - chr1 54631692 54631815 3887460 3930118 U NO +NM_008765_Orc2l chr1 58519275 58561933 - chr1 63664888 63665018 5102955 5102955 D NO +NM_008765_Orc2l chr1 58519275 58561933 - chr1 52625416 52625560 5893715 5936373 U NO +NM_008781_Pax3 chr1 78047196 78193701 - chr1 78630893 78631160 437192 437192 D NO +NM_008781_Pax3 chr1 78047196 78193701 - chr1 77457642 77457791 589405 735910 U NO +NM_008781_Pax3 chr1 78047196 78193701 - chr1 75481920 75482054 2565142 2711647 U NO +NM_008781_Pax3 chr1 78047196 78193701 - chr1 72815517 72815742 5231454 5377959 U NO +NM_008795_Pctk3 chr1 133972174 134036519 - chr1 133114860 133115015 857159 921504 U NO +NM_008795_Pctk3 chr1 133972174 134036519 - chr1 132950929 132951247 1020927 1085272 U NO +NM_008795_Pctk3 chr1 133972174 134036519 - chr1 135582677 135582828 1546158 1546158 D NO +NM_008795_Pctk3 chr1 133972174 134036519 - chr1 135851853 135852218 1815334 1815334 D NO +NM_008798_Pdcd1 chr1 95931620 95977526 - chr1 95186508 95186637 744983 790889 U NO +NM_008798_Pdcd1 chr1 95931620 95977526 - chr1 92070253 92070431 3861189 3907095 U NO +NM_008798_Pdcd1 chr1 95931620 95977526 - chr1 91496155 91496319 4435301 4481207 U NO +NM_008798_Pdcd1 chr1 95931620 95977526 - chr1 91496003 91496145 4435475 4481381 U NO +NM_008801_Pde6d chr1 88427331 88479102 - chr1 88408969 88409267 18064 69835 U NO +NM_008801_Pde6d chr1 88427331 88479102 - chr1 89989553 89989714 1510451 1510451 D NO +NM_008801_Pde6d chr1 88427331 88479102 - chr1 90412932 90413132 1933830 1933830 D NO +NM_008801_Pde6d chr1 88427331 88479102 - chr1 90592499 90592629 2113397 2113397 D NO +NM_008825_Pfkfb2 chr1 132566787 132625820 - chr1 132950929 132951247 325109 325109 D NO +NM_008825_Pfkfb2 chr1 132566787 132625820 - chr1 133114860 133115015 489040 489040 D NO +NM_008825_Pfkfb2 chr1 132566787 132625820 - chr1 135582677 135582828 2956857 2956857 D NO +NM_008825_Pfkfb2 chr1 132566787 132625820 - chr1 135851853 135852218 3226033 3226033 D NO +NM_008866_Lypla1 chr1 4797815 4844373 + chr1 9619046 9619167 4774673 4821231 U NO +NM_008866_Lypla1 chr1 4797815 4844373 + chr1 9619175 9619382 4774802 4821360 U NO +NM_008866_Lypla1 chr1 4797815 4844373 + chr1 10617233 10617437 5772860 5819418 U NO +NM_008866_Lypla1 chr1 4797815 4844373 + chr1 13829227 13829564 8984854 9031412 U NO +NM_008869_Pla2g4a chr1 151661289 151808414 - chr1 154971572 154971673 3163158 3163158 D NO +NM_008869_Pla2g4a chr1 151661289 151808414 - chr1 155123313 155123435 3314899 3314899 D NO +NM_008869_Pla2g4a chr1 151661289 151808414 - chr1 145591041 145591176 6070113 6217238 U NO +NM_008869_Pla2g4a chr1 151661289 151808414 - chr1 158510523 158510813 6702109 6702109 D NO +NM_008882_Plxna2 chr1 196411150 196654445 + chr1 197057796 197057843 403351 646646 U NO +NM_008882_Plxna2 chr1 196411150 196654445 + chr1 195384767 195385195 1025955 1025955 D NO +NM_008882_Plxna2 chr1 196411150 196654445 + chr1 195342728 195342985 1068165 1068165 D NO +NM_008882_Plxna2 chr1 196411150 196654445 + chr1 195338316 195338616 1072534 1072534 D NO +NM_008900_Pou3f3 chr1 42662066 42757055 + chr1 44195449 44195639 1438394 1533383 U NO +NM_008900_Pou3f3 chr1 42662066 42757055 + chr1 40325917 40326123 2335943 2335943 D NO +NM_008900_Pou3f3 chr1 42662066 42757055 + chr1 39492140 39492513 3169553 3169553 D NO +NM_008900_Pou3f3 chr1 42662066 42757055 + chr1 36106813 36107058 6555008 6555008 D NO +NM_008911_Ppox chr1 173200042 173211335 - chr1 172620917 172621080 578962 590255 U NO +NM_008911_Ppox chr1 173200042 173211335 - chr1 172620779 172620912 579130 590423 U NO +NM_008911_Ppox chr1 173200042 173211335 - chr1 174376470 174376659 1165135 1165135 D NO +NM_008911_Ppox chr1 173200042 173211335 - chr1 170255081 170255260 2944782 2956075 U NO +NM_008922_Prim2 chr1 33510658 33727287 - chr1 34206924 34207100 479637 479637 D NO +NM_008922_Prim2 chr1 33510658 33727287 - chr1 36106813 36107058 2379526 2379526 D NO +NM_008922_Prim2 chr1 33510658 33727287 - chr1 39492140 39492513 5764853 5764853 D NO +NM_008922_Prim2 chr1 33510658 33727287 - chr1 40325917 40326123 6598630 6598630 D NO +NM_008937_Prox1 chr1 191943166 191999411 - chr1 194258648 194259032 2259237 2259237 D NO +NM_008937_Prox1 chr1 191943166 191999411 - chr1 194645118 194645475 2645707 2645707 D NO +NM_008937_Prox1 chr1 191943166 191999411 - chr1 194957396 194957723 2957985 2957985 D NO +NM_008937_Prox1 chr1 191943166 191999411 - chr1 195324443 195324741 3325032 3325032 D NO +NM_008976_Ptpn14 chr1 191512039 191694746 + chr1 194258648 194259032 2563902 2746609 U NO +NM_008976_Ptpn14 chr1 191512039 191694746 + chr1 194645118 194645475 2950372 3133079 U NO +NM_008976_Ptpn14 chr1 191512039 191694746 + chr1 194957396 194957723 3262650 3445357 U NO +NM_008976_Ptpn14 chr1 191512039 191694746 + chr1 195324443 195324741 3629697 3812404 U NO +NM_008985_Ptprn chr1 75243625 75261057 - chr1 75481920 75482054 220863 220863 D NO +NM_008985_Ptprn chr1 75243625 75261057 - chr1 77457642 77457791 2196585 2196585 D NO +NM_008985_Ptprn chr1 75243625 75261057 - chr1 72815517 72815742 2427883 2445315 U NO +NM_008985_Ptprn chr1 75243625 75261057 - chr1 72770058 72770226 2473399 2490831 U NO +NM_008998_Rab17 chr1 92842177 92905581 - chr1 92070253 92070431 771746 835150 U NO +NM_008998_Rab17 chr1 92842177 92905581 - chr1 91496155 91496319 1345858 1409262 U NO +NM_008998_Rab17 chr1 92842177 92905581 - chr1 91496003 91496145 1346032 1409436 U NO +NM_008998_Rab17 chr1 92842177 92905581 - chr1 95186508 95186637 2280927 2280927 D NO +NM_008999_Rab23 chr1 33776747 33799402 + chr1 34206924 34207100 407522 430177 U NO +NM_008999_Rab23 chr1 33776747 33799402 + chr1 36106813 36107058 2307411 2330066 U NO +NM_008999_Rab23 chr1 33776747 33799402 + chr1 39492140 39492513 5692738 5715393 U NO +NM_008999_Rab23 chr1 33776747 33799402 + chr1 40325917 40326123 6526515 6549170 U NO +NM_009049_Resp18 chr1 75268774 75274970 - chr1 75481920 75482054 206950 206950 D NO +NM_009049_Resp18 chr1 75268774 75274970 - chr1 77457642 77457791 2182672 2182672 D NO +NM_009049_Resp18 chr1 75268774 75274970 - chr1 72815517 72815742 2453032 2459228 U NO +NM_009049_Resp18 chr1 75268774 75274970 - chr1 72770058 72770226 2498548 2504744 U NO +NM_009061_Rgs2 chr1 145846468 145858945 - chr1 145591041 145591176 255292 267769 U NO +NM_009061_Rgs2 chr1 145846468 145858945 - chr1 140381656 140381785 5464683 5477160 U NO +NM_009061_Rgs2 chr1 145846468 145858945 - chr1 138437726 138437860 7408608 7421085 U NO +NM_009061_Rgs2 chr1 145846468 145858945 - chr1 136956468 136956598 8889870 8902347 U NO +NM_009062_Rgs4 chr1 171671620 171743114 - chr1 172620779 172620912 877665 877665 D NO +NM_009062_Rgs4 chr1 171671620 171743114 - chr1 172620917 172621080 877803 877803 D NO +NM_009062_Rgs4 chr1 171671620 171743114 - chr1 170255081 170255260 1416360 1487854 U NO +NM_009062_Rgs4 chr1 171671620 171743114 - chr1 174376470 174376659 2633356 2633356 D NO +NM_009063_Rgs5 chr1 171585632 171625107 + chr1 172620779 172620912 995672 1035147 U NO +NM_009063_Rgs5 chr1 171585632 171625107 + chr1 172620917 172621080 995810 1035285 U NO +NM_009063_Rgs5 chr1 171585632 171625107 + chr1 170255081 170255260 1330372 1330372 D NO +NM_009063_Rgs5 chr1 171585632 171625107 + chr1 174376470 174376659 2751363 2790838 U NO +NM_009107_Rxrg chr1 169399669 169569753 + chr1 170255081 170255260 685328 855412 U NO +NM_009107_Rxrg chr1 169399669 169569753 + chr1 167906284 167906554 1493115 1493115 D NO +NM_009107_Rxrg chr1 169399669 169569753 + chr1 167222964 167223261 2176408 2176408 D NO +NM_009107_Rxrg chr1 169399669 169569753 + chr1 172620779 172620912 3051026 3221110 U NO +NM_009118_Sag chr1 89700275 89741733 + chr1 89989553 89989714 247820 289278 U NO +NM_009118_Sag chr1 89700275 89741733 + chr1 90412932 90413132 671199 712657 U NO +NM_009118_Sag chr1 89700275 89741733 + chr1 90592499 90592629 850766 892224 U NO +NM_009118_Sag chr1 89700275 89741733 + chr1 88408969 88409267 1291008 1291008 D NO +NM_009126_Serpinb3a chr1 108942184 108948902 - chr1 108747519 108747791 194393 201111 U NO +NM_009126_Serpinb3a chr1 108942184 108948902 - chr1 120760212 120760461 11811310 11811310 D NO +NM_009126_Serpinb3a chr1 108942184 108948902 - chr1 95186508 95186637 13755547 13762265 U NO +NM_009126_Serpinb3a chr1 108942184 108948902 - chr1 92070253 92070431 16871753 16878471 U NO +NM_009129_Scg2 chr1 79431244 79436675 - chr1 78630893 78631160 800084 805515 U NO +NM_009129_Scg2 chr1 79431244 79436675 - chr1 77457642 77457791 1973453 1978884 U NO +NM_009129_Scg2 chr1 79431244 79436675 - chr1 75481920 75482054 3949190 3954621 U NO +NM_009129_Scg2 chr1 79431244 79436675 - chr1 72815517 72815742 6615502 6620933 U NO +NM_009183_St8sia4 chr1 97484259 97672426 - chr1 95186508 95186637 2297622 2485789 U NO +NM_009183_St8sia4 chr1 97484259 97672426 - chr1 92070253 92070431 5413828 5601995 U NO +NM_009183_St8sia4 chr1 97484259 97672426 - chr1 91496155 91496319 5987940 6176107 U NO +NM_009183_St8sia4 chr1 97484259 97672426 - chr1 91496003 91496145 5988114 6176281 U NO +NM_009190_Vps4b chr1 108665873 108739123 - chr1 108747519 108747791 8396 8396 D NO +NM_009190_Vps4b chr1 108665873 108739123 - chr1 120760212 120760461 12021089 12021089 D NO +NM_009190_Vps4b chr1 108665873 108739123 - chr1 95186508 95186637 13479236 13552486 U NO +NM_009190_Vps4b chr1 108665873 108739123 - chr1 92070253 92070431 16595442 16668692 U NO +NM_009208_Slc4a3 chr1 75539833 75564973 + chr1 75481920 75482054 57779 57779 D NO +NM_009208_Slc4a3 chr1 75539833 75564973 + chr1 77457642 77457791 1892669 1917809 U NO +NM_009208_Slc4a3 chr1 75539833 75564973 + chr1 72815517 72815742 2724091 2724091 D NO +NM_009208_Slc4a3 chr1 75539833 75564973 + chr1 72770058 72770226 2769607 2769607 D NO +NM_009230_Soat1 chr1 158354679 158417632 - chr1 158510523 158510813 92891 92891 D NO +NM_009230_Soat1 chr1 158354679 158417632 - chr1 158537267 158537411 119635 119635 D NO +NM_009230_Soat1 chr1 158354679 158417632 - chr1 158580638 158580759 163006 163006 D NO +NM_009230_Soat1 chr1 158354679 158417632 - chr1 158835251 158835391 417619 417619 D NO +NM_009255_Serpine2 chr1 79778648 79891246 - chr1 78630893 78631160 1147488 1260086 U NO +NM_009255_Serpine2 chr1 79778648 79891246 - chr1 77457642 77457791 2320857 2433455 U NO +NM_009255_Serpine2 chr1 79778648 79891246 - chr1 75481920 75482054 4296594 4409192 U NO +NM_009255_Serpine2 chr1 79778648 79891246 - chr1 72815517 72815742 6962906 7075504 U NO +NM_009257_Serpinb5 chr1 108757652 108779925 + chr1 108747519 108747791 9861 9861 D NO +NM_009257_Serpinb5 chr1 108757652 108779925 + chr1 120760212 120760461 11980287 12002560 U NO +NM_009257_Serpinb5 chr1 108757652 108779925 + chr1 95186508 95186637 13571015 13571015 D NO +NM_009257_Serpinb5 chr1 108757652 108779925 + chr1 92070253 92070431 16687221 16687221 D NO +NM_009283_Stat1 chr1 51740305 52218707 + chr1 52625416 52625560 406709 885111 U NO +NM_009283_Stat1 chr1 51740305 52218707 + chr1 54631692 54631815 2412985 2891387 U NO +NM_009283_Stat1 chr1 51740305 52218707 + chr1 55283572 55283675 3064865 3543267 U NO +NM_009283_Stat1 chr1 51740305 52218707 + chr1 44195449 44195639 7544666 7544666 D NO +NM_009307_Syt2 chr1 136543209 136659150 + chr1 136956468 136956598 297318 413259 U NO +NM_009307_Syt2 chr1 136543209 136659150 + chr1 135851853 135852218 690991 690991 D NO +NM_009307_Syt2 chr1 136543209 136659150 + chr1 135582677 135582828 960381 960381 D NO +NM_009307_Syt2 chr1 136543209 136659150 + chr1 138437726 138437860 1778576 1894517 U NO +NM_009334_Tcfap2b chr1 19198995 19228906 + chr1 17030405 17030545 2168450 2168450 D NO +NM_009334_Tcfap2b chr1 19198995 19228906 + chr1 13829227 13829564 5369431 5369431 D NO +NM_009334_Tcfap2b chr1 19198995 19228906 + chr1 24609562 24609623 5380656 5410567 U NO +NM_009334_Tcfap2b chr1 19198995 19228906 + chr1 24609923 24609992 5381017 5410928 U NO +NM_009352_Terf1 chr1 15785995 15845901 + chr1 17030405 17030545 1184504 1244410 U NO +NM_009352_Terf1 chr1 15785995 15845901 + chr1 13829227 13829564 1956431 1956431 D NO +NM_009352_Terf1 chr1 15785995 15845901 + chr1 10617233 10617437 5168558 5168558 D NO +NM_009352_Terf1 chr1 15785995 15845901 + chr1 9619175 9619382 6166613 6166613 D NO +NM_009355_Tesp1 chr1 34554997 34559905 + chr1 34206924 34207100 347897 347897 D NO +NM_009355_Tesp1 chr1 34554997 34559905 + chr1 36106813 36107058 1546908 1551816 U NO +NM_009355_Tesp1 chr1 34554997 34559905 + chr1 39492140 39492513 4932235 4937143 U NO +NM_009355_Tesp1 chr1 34554997 34559905 + chr1 40325917 40326123 5766012 5770920 U NO +NM_009356_Tesp2 chr1 34594321 34617749 - chr1 34206924 34207100 387221 410649 U NO +NM_009356_Tesp2 chr1 34594321 34617749 - chr1 36106813 36107058 1489064 1489064 D NO +NM_009356_Tesp2 chr1 34594321 34617749 - chr1 39492140 39492513 4874391 4874391 D NO +NM_009356_Tesp2 chr1 34594321 34617749 - chr1 40325917 40326123 5708168 5708168 D NO +NM_009367_Tgfb2 chr1 188337162 188544530 - chr1 185854947 185855105 2482057 2689425 U NO +NM_009367_Tgfb2 chr1 188337162 188544530 - chr1 194258648 194259032 5714118 5714118 D NO +NM_009367_Tgfb2 chr1 188337162 188544530 - chr1 182479646 182479905 5857257 6064625 U NO +NM_009367_Tgfb2 chr1 188337162 188544530 - chr1 194645118 194645475 6100588 6100588 D NO +NM_009399_Tnfrsf11a chr1 107677300 107859295 + chr1 108747519 108747791 888224 1070219 U NO +NM_009399_Tnfrsf11a chr1 107677300 107859295 + chr1 95186508 95186637 12490663 12490663 D NO +NM_009399_Tnfrsf11a chr1 107677300 107859295 + chr1 120760212 120760461 12900917 13082912 U NO +NM_009399_Tnfrsf11a chr1 107677300 107859295 + chr1 92070253 92070431 15606869 15606869 D NO +NM_009407_Tnp1 chr1 73061657 73062512 - chr1 72815517 72815742 245915 246770 U NO +NM_009407_Tnp1 chr1 73061657 73062512 - chr1 72770058 72770226 291431 292286 U NO +NM_009407_Tnp1 chr1 73061657 73062512 - chr1 72769824 72770056 291601 292456 U NO +NM_009407_Tnp1 chr1 73061657 73062512 - chr1 75481920 75482054 2419408 2419408 D NO +NM_009418_Tpp2 chr1 43936027 44065003 + chr1 44195449 44195639 130446 259422 U NO +NM_009418_Tpp2 chr1 43936027 44065003 + chr1 40325917 40326123 3609904 3609904 D NO +NM_009418_Tpp2 chr1 43936027 44065003 + chr1 39492140 39492513 4443514 4443514 D NO +NM_009418_Tpp2 chr1 43936027 44065003 + chr1 36106813 36107058 7828969 7828969 D NO +NM_009447_Tuba4a chr1 75210818 75219831 - chr1 75481920 75482054 262089 262089 D NO +NM_009447_Tuba4a chr1 75210818 75219831 - chr1 77457642 77457791 2237811 2237811 D NO +NM_009447_Tuba4a chr1 75210818 75219831 - chr1 72815517 72815742 2395076 2404089 U NO +NM_009447_Tuba4a chr1 75210818 75219831 - chr1 72770058 72770226 2440592 2449605 U NO +NM_009452_Tnfsf4 chr1 163212600 163374314 + chr1 163827897 163828062 453583 615297 U NO +NM_009452_Tnfsf4 chr1 163212600 163374314 + chr1 164215623 164215935 841309 1003023 U NO +NM_009452_Tnfsf4 chr1 163212600 163374314 + chr1 159240736 159240866 3971734 3971734 D NO +NM_009452_Tnfsf4 chr1 163212600 163374314 + chr1 167222964 167223261 3848650 4010364 U NO +NM_009460_Sumo1 chr1 59643412 59727658 - chr1 63664888 63665018 3937230 3937230 D NO +NM_009460_Sumo1 chr1 59643412 59727658 - chr1 55283572 55283675 4359737 4443983 U NO +NM_009460_Sumo1 chr1 59643412 59727658 - chr1 54631692 54631815 5011597 5095843 U NO +NM_009460_Sumo1 chr1 59643412 59727658 - chr1 52625416 52625560 7017852 7102098 U NO +NM_009480_Usf1 chr1 173341335 173348954 + chr1 172620917 172621080 720255 720255 D NO +NM_009480_Usf1 chr1 173341335 173348954 + chr1 172620779 172620912 720423 720423 D NO +NM_009480_Usf1 chr1 173341335 173348954 + chr1 174376470 174376659 1027516 1035135 U NO +NM_009480_Usf1 chr1 173341335 173348954 + chr1 170255081 170255260 3086075 3086075 D NO +NM_009509_Vil1 chr1 74455970 74485488 + chr1 75481920 75482054 996432 1025950 U NO +NM_009509_Vil1 chr1 74455970 74485488 + chr1 72815517 72815742 1640228 1640228 D NO +NM_009509_Vil1 chr1 74455970 74485488 + chr1 72770058 72770226 1685744 1685744 D NO +NM_009509_Vil1 chr1 74455970 74485488 + chr1 72769824 72770056 1685914 1685914 D NO +NM_009518_Wnt10a chr1 74838090 74898253 + chr1 75481920 75482054 583667 643830 U NO +NM_009518_Wnt10a chr1 74838090 74898253 + chr1 72815517 72815742 2022348 2022348 D NO +NM_009518_Wnt10a chr1 74838090 74898253 + chr1 72770058 72770226 2067864 2067864 D NO +NM_009518_Wnt10a chr1 74838090 74898253 + chr1 72769824 72770056 2068034 2068034 D NO +NM_009526_Wnt6 chr1 74818493 74831875 + chr1 75481920 75482054 650045 663427 U NO +NM_009526_Wnt6 chr1 74818493 74831875 + chr1 72815517 72815742 2002751 2002751 D NO +NM_009526_Wnt6 chr1 74818493 74831875 + chr1 72770058 72770226 2048267 2048267 D NO +NM_009526_Wnt6 chr1 74818493 74831875 + chr1 72769824 72770056 2048437 2048437 D NO +NM_009533_Xrcc5 chr1 72354001 72453365 + chr1 72769824 72770056 316459 415823 U NO +NM_009533_Xrcc5 chr1 72354001 72453365 + chr1 72770058 72770226 316693 416057 U NO +NM_009533_Xrcc5 chr1 72354001 72453365 + chr1 72815517 72815742 362152 461516 U NO +NM_009533_Xrcc5 chr1 72354001 72453365 + chr1 75481920 75482054 3028555 3127919 U NO +NM_009539_Zap70 chr1 36818663 36839663 + chr1 36106813 36107058 711605 711605 D NO +NM_009539_Zap70 chr1 36818663 36839663 + chr1 34206924 34207100 2611563 2611563 D NO +NM_009539_Zap70 chr1 36818663 36839663 + chr1 39492140 39492513 2652477 2673477 U NO +NM_009539_Zap70 chr1 36818663 36839663 + chr1 40325917 40326123 3486254 3507254 U NO +NM_009579_Slc30a1 chr1 193730666 193737101 + chr1 194258648 194259032 521547 527982 U NO +NM_009579_Slc30a1 chr1 193730666 193737101 + chr1 194645118 194645475 908017 914452 U NO +NM_009579_Slc30a1 chr1 193730666 193737101 + chr1 194957396 194957723 1220295 1226730 U NO +NM_009579_Slc30a1 chr1 193730666 193737101 + chr1 195324443 195324741 1587342 1593777 U NO +NM_009581_Zp3r chr1 132473290 132526179 - chr1 132950929 132951247 424750 424750 D NO +NM_009581_Zp3r chr1 132473290 132526179 - chr1 133114860 133115015 588681 588681 D NO +NM_009581_Zp3r chr1 132473290 132526179 - chr1 135582677 135582828 3056498 3056498 D NO +NM_009581_Zp3r chr1 132473290 132526179 - chr1 135851853 135852218 3325674 3325674 D NO +NM_009604_Chrng chr1 89102267 89109269 + chr1 88408969 88409267 693000 693000 D NO +NM_009604_Chrng chr1 89102267 89109269 + chr1 89989553 89989714 880284 887286 U NO +NM_009604_Chrng chr1 89102267 89109269 + chr1 90412932 90413132 1303663 1310665 U NO +NM_009604_Chrng chr1 89102267 89109269 + chr1 90592499 90592629 1483230 1490232 U NO +NM_009676_Aox1 chr1 58086687 58165423 + chr1 55283572 55283675 2803012 2803012 D NO +NM_009676_Aox1 chr1 58086687 58165423 + chr1 54631692 54631815 3454872 3454872 D NO +NM_009676_Aox1 chr1 58086687 58165423 + chr1 52625416 52625560 5461127 5461127 D NO +NM_009676_Aox1 chr1 58086687 58165423 + chr1 63664888 63665018 5499465 5578201 U NO +NM_009721_Atp1b1 chr1 166367243 166524675 - chr1 167222964 167223261 698289 698289 D NO +NM_009721_Atp1b1 chr1 166367243 166524675 - chr1 167906284 167906554 1381609 1381609 D NO +NM_009721_Atp1b1 chr1 166367243 166524675 - chr1 164215623 164215935 2151308 2308740 U NO +NM_009721_Atp1b1 chr1 166367243 166524675 - chr1 163827897 163828062 2539181 2696613 U NO +NM_009741_Bcl2 chr1 108362593 108614036 - chr1 108747519 108747791 133483 133483 D NO +NM_009741_Bcl2 chr1 108362593 108614036 - chr1 120760212 120760461 12146176 12146176 D NO +NM_009741_Bcl2 chr1 108362593 108614036 - chr1 95186508 95186637 13175956 13427399 U NO +NM_009741_Bcl2 chr1 108362593 108614036 - chr1 92070253 92070431 16292162 16543605 U NO +NM_009782_Cacna1e chr1 156242220 156916799 - chr1 158510523 158510813 1593724 1593724 D NO +NM_009782_Cacna1e chr1 156242220 156916799 - chr1 158537267 158537411 1620468 1620468 D NO +NM_009782_Cacna1e chr1 156242220 156916799 - chr1 158580638 158580759 1663839 1663839 D NO +NM_009782_Cacna1e chr1 156242220 156916799 - chr1 155123313 155123435 1118785 1793364 U NO +NM_009786_Cacybp chr1 162132500 162143003 - chr1 163827897 163828062 1684894 1684894 D NO +NM_009786_Cacybp chr1 162132500 162143003 - chr1 164215623 164215935 2072620 2072620 D NO +NM_009786_Cacybp chr1 162132500 162143003 - chr1 159240736 159240866 2891634 2902137 U NO +NM_009786_Cacybp chr1 162132500 162143003 - chr1 158835251 158835391 3297109 3307612 U NO +NM_009791_Aspm chr1 141351360 141393207 + chr1 140381656 140381785 969575 969575 D NO +NM_009791_Aspm chr1 141351360 141393207 + chr1 138437726 138437860 2913500 2913500 D NO +NM_009791_Aspm chr1 141351360 141393207 + chr1 145591041 145591176 4197834 4239681 U NO +NM_009791_Aspm chr1 141351360 141393207 + chr1 136956468 136956598 4394762 4394762 D NO +NM_009794_Capn2 chr1 184394108 184479307 - chr1 185854947 185855105 1375640 1375640 D NO +NM_009794_Capn2 chr1 184394108 184479307 - chr1 182479646 182479905 1914203 1999402 U NO +NM_009794_Capn2 chr1 184394108 184479307 - chr1 181061299 181061446 3332662 3417861 U NO +NM_009794_Capn2 chr1 184394108 184479307 - chr1 194258648 194259032 9779341 9779341 D NO +NM_009803_Nr1i3 chr1 173122612 173149661 + chr1 172620917 172621080 501532 501532 D NO +NM_009803_Nr1i3 chr1 173122612 173149661 + chr1 172620779 172620912 501700 501700 D NO +NM_009803_Nr1i3 chr1 173122612 173149661 + chr1 174376470 174376659 1226809 1253858 U NO +NM_009803_Nr1i3 chr1 173122612 173149661 + chr1 170255081 170255260 2867352 2867352 D NO +NM_009812_Casp8 chr1 58818409 58904327 + chr1 55283572 55283675 3534734 3534734 D NO +NM_009812_Casp8 chr1 58818409 58904327 + chr1 54631692 54631815 4186594 4186594 D NO +NM_009812_Casp8 chr1 58818409 58904327 + chr1 63664888 63665018 4760561 4846479 U NO +NM_009812_Casp8 chr1 58818409 58904327 + chr1 52625416 52625560 6192849 6192849 D NO +NM_009813_Casq1 chr1 174140028 174150006 - chr1 174376470 174376659 226464 226464 D NO +NM_009813_Casq1 chr1 174140028 174150006 - chr1 172620917 172621080 1518948 1528926 U NO +NM_009813_Casq1 chr1 174140028 174150006 - chr1 172620779 172620912 1519116 1529094 U NO +NM_009813_Casq1 chr1 174140028 174150006 - chr1 170255081 170255260 3884768 3894746 U NO +NM_009826_Rb1cc1 chr1 6196277 6266709 + chr1 9619046 9619167 3352337 3422769 U NO +NM_009826_Rb1cc1 chr1 6196277 6266709 + chr1 9619175 9619382 3352466 3422898 U NO +NM_009826_Rb1cc1 chr1 6196277 6266709 + chr1 10617233 10617437 4350524 4420956 U NO +NM_009826_Rb1cc1 chr1 6196277 6266709 + chr1 13829227 13829564 7562518 7632950 U NO +NM_009843_Ctla4 chr1 60943864 61098205 + chr1 63664888 63665018 2566683 2721024 U NO +NM_009843_Ctla4 chr1 60943864 61098205 + chr1 55283572 55283675 5660189 5660189 D NO +NM_009843_Ctla4 chr1 60943864 61098205 + chr1 54631692 54631815 6312049 6312049 D NO +NM_009843_Ctla4 chr1 60943864 61098205 + chr1 52625416 52625560 8318304 8318304 D NO +NM_009872_Cdk5r2 chr1 74901511 74904288 + chr1 75481920 75482054 577632 580409 U NO +NM_009872_Cdk5r2 chr1 74901511 74904288 + chr1 72815517 72815742 2085769 2085769 D NO +NM_009872_Cdk5r2 chr1 74901511 74904288 + chr1 72770058 72770226 2131285 2131285 D NO +NM_009872_Cdk5r2 chr1 74901511 74904288 + chr1 72769824 72770056 2131455 2131455 D NO +NM_009909_Il8rb chr1 74200075 74207820 + chr1 75481920 75482054 1274100 1281845 U NO +NM_009909_Il8rb chr1 74200075 74207820 + chr1 72815517 72815742 1384333 1384333 D NO +NM_009909_Il8rb chr1 74200075 74207820 + chr1 72770058 72770226 1429849 1429849 D NO +NM_009909_Il8rb chr1 74200075 74207820 + chr1 72769824 72770056 1430019 1430019 D NO +NM_009911_Cxcr4 chr1 130436268 130609324 - chr1 132950929 132951247 2341605 2341605 D NO +NM_009911_Cxcr4 chr1 130436268 130609324 - chr1 133114860 133115015 2505536 2505536 D NO +NM_009911_Cxcr4 chr1 130436268 130609324 - chr1 135582677 135582828 4973353 4973353 D NO +NM_009911_Cxcr4 chr1 130436268 130609324 - chr1 135851853 135852218 5242529 5242529 D NO +NM_009918_Cnga3 chr1 37275192 37321882 + chr1 36106813 36107058 1168134 1168134 D NO +NM_009918_Cnga3 chr1 37275192 37321882 + chr1 39492140 39492513 2170258 2216948 U NO +NM_009918_Cnga3 chr1 37275192 37321882 + chr1 40325917 40326123 3004035 3050725 U NO +NM_009918_Cnga3 chr1 37275192 37321882 + chr1 34206924 34207100 3068092 3068092 D NO +NM_009930_Col3a1 chr1 45368295 45413500 + chr1 44195449 44195639 1172656 1172656 D NO +NM_009930_Col3a1 chr1 45368295 45413500 + chr1 40325917 40326123 5042172 5042172 D NO +NM_009930_Col3a1 chr1 45368295 45413500 + chr1 39492140 39492513 5875782 5875782 D NO +NM_009930_Col3a1 chr1 45368295 45413500 + chr1 52625416 52625560 7211916 7257121 U NO +NM_009938_Copa chr1 174012565 174052450 + chr1 174376470 174376659 324020 363905 U NO +NM_009938_Copa chr1 174012565 174052450 + chr1 172620917 172621080 1391485 1391485 D NO +NM_009938_Copa chr1 174012565 174052450 + chr1 172620779 172620912 1391653 1391653 D NO +NM_009938_Copa chr1 174012565 174052450 + chr1 170255081 170255260 3757305 3757305 D NO +NM_010016_Cd55 chr1 132326379 132359520 - chr1 132950929 132951247 591409 591409 D NO +NM_010016_Cd55 chr1 132326379 132359520 - chr1 133114860 133115015 755340 755340 D NO +NM_010016_Cd55 chr1 132326379 132359520 - chr1 135582677 135582828 3223157 3223157 D NO +NM_010016_Cd55 chr1 132326379 132359520 - chr1 135851853 135852218 3492333 3492333 D NO +NM_010043_Des chr1 75356887 75365134 + chr1 75481920 75482054 116786 125033 U NO +NM_010043_Des chr1 75356887 75365134 + chr1 77457642 77457791 2092508 2100755 U NO +NM_010043_Des chr1 75356887 75365134 + chr1 72815517 72815742 2541145 2541145 D NO +NM_010043_Des chr1 75356887 75365134 + chr1 72770058 72770226 2586661 2586661 D NO +NM_010045_Darc chr1 175234342 175263520 - chr1 174376470 174376659 857683 886861 U NO +NM_010045_Darc chr1 175234342 175263520 - chr1 172620917 172621080 2613262 2642440 U NO +NM_010045_Darc chr1 175234342 175263520 - chr1 172620779 172620912 2613430 2642608 U NO +NM_010045_Darc chr1 175234342 175263520 - chr1 170255081 170255260 4979082 5008260 U NO +NM_010094_Lefty1 chr1 182865132 182868532 + chr1 182479646 182479905 385227 385227 D NO +NM_010094_Lefty1 chr1 182865132 182868532 + chr1 181061299 181061446 1803686 1803686 D NO +NM_010094_Lefty1 chr1 182865132 182868532 + chr1 185854947 185855105 2986415 2989815 U NO +NM_010094_Lefty1 chr1 182865132 182868532 + chr1 174376470 174376659 8488473 8488473 D NO +NM_010098_Opn3 chr1 177592560 177622774 - chr1 174376470 174376659 3215901 3246115 U NO +NM_010098_Opn3 chr1 177592560 177622774 - chr1 181061299 181061446 3438525 3438525 D NO +NM_010098_Opn3 chr1 177592560 177622774 - chr1 182479646 182479905 4856872 4856872 D NO +NM_010098_Opn3 chr1 177592560 177622774 - chr1 172620917 172621080 4971480 5001694 U NO +NM_010133_En1 chr1 122494080 122540975 + chr1 120760212 120760461 1733619 1733619 D NO +NM_010133_En1 chr1 122494080 122540975 + chr1 132950929 132951247 10409954 10456849 U NO +NM_010133_En1 chr1 122494080 122540975 + chr1 133114860 133115015 10573885 10620780 U NO +NM_010133_En1 chr1 122494080 122540975 + chr1 135582677 135582828 13041702 13088597 U NO +NM_010135_Enah chr1 183776371 183949877 - chr1 182479646 182479905 1296466 1469972 U NO +NM_010135_Enah chr1 183776371 183949877 - chr1 185854947 185855105 1905070 1905070 D NO +NM_010135_Enah chr1 183776371 183949877 - chr1 181061299 181061446 2714925 2888431 U NO +NM_010135_Enah chr1 183776371 183949877 - chr1 174376470 174376659 9399712 9573218 U NO +NM_010145_Ephx1 chr1 182919689 182951015 - chr1 182479646 182479905 439784 471110 U NO +NM_010145_Ephx1 chr1 182919689 182951015 - chr1 181061299 181061446 1858243 1889569 U NO +NM_010145_Ephx1 chr1 182919689 182951015 - chr1 185854947 185855105 2903932 2903932 D NO +NM_010145_Ephx1 chr1 182919689 182951015 - chr1 174376470 174376659 8543030 8574356 U NO +NM_010164_Eya1 chr1 14117632 14318907 - chr1 13829227 13829564 288068 489343 U NO +NM_010164_Eya1 chr1 14117632 14318907 - chr1 17030405 17030545 2711498 2711498 D NO +NM_010164_Eya1 chr1 14117632 14318907 - chr1 10617233 10617437 3500195 3701470 U NO +NM_010164_Eya1 chr1 14117632 14318907 - chr1 9619175 9619382 4498250 4699525 U NO +NM_010177_Fasl chr1 163710820 163718844 - chr1 163827897 163828062 109053 109053 D NO +NM_010177_Fasl chr1 163710820 163718844 - chr1 164215623 164215935 496779 496779 D NO +NM_010177_Fasl chr1 163710820 163718844 - chr1 167222964 167223261 3504120 3504120 D NO +NM_010177_Fasl chr1 163710820 163718844 - chr1 167906284 167906554 4187440 4187440 D NO +NM_010184_Fcer1a chr1 175148098 175157377 - chr1 174376470 174376659 771439 780718 U NO +NM_010184_Fcer1a chr1 175148098 175157377 - chr1 172620917 172621080 2527018 2536297 U NO +NM_010184_Fcer1a chr1 175148098 175157377 - chr1 172620779 172620912 2527186 2536465 U NO +NM_010184_Fcer1a chr1 175148098 175157377 - chr1 170255081 170255260 4892838 4902117 U NO +NM_010185_Fcer1g chr1 173159708 173164476 - chr1 172620917 172621080 538628 543396 U NO +NM_010185_Fcer1g chr1 173159708 173164476 - chr1 172620779 172620912 538796 543564 U NO +NM_010185_Fcer1g chr1 173159708 173164476 - chr1 174376470 174376659 1211994 1211994 D NO +NM_010185_Fcer1g chr1 173159708 173164476 - chr1 170255081 170255260 2904448 2909216 U NO +NM_010188_Fcgr3 chr1 172916162 173015807 - chr1 172620917 172621080 295082 394727 U NO +NM_010188_Fcgr3 chr1 172916162 173015807 - chr1 172620779 172620912 295250 394895 U NO +NM_010188_Fcgr3 chr1 172916162 173015807 - chr1 174376470 174376659 1360663 1360663 D NO +NM_010188_Fcgr3 chr1 172916162 173015807 - chr1 170255081 170255260 2660902 2760547 U NO +NM_010209_Fh1 chr1 177427308 177555746 - chr1 174376470 174376659 3050649 3179087 U NO +NM_010209_Fh1 chr1 177427308 177555746 - chr1 181061299 181061446 3505553 3505553 D NO +NM_010209_Fh1 chr1 177427308 177555746 - chr1 182479646 182479905 4923900 4923900 D NO +NM_010209_Fh1 chr1 177427308 177555746 - chr1 172620917 172621080 4806228 4934666 U NO +NM_010212_Fhl2 chr1 43179941 43255166 - chr1 44195449 44195639 940283 940283 D NO +NM_010212_Fhl2 chr1 43179941 43255166 - chr1 40325917 40326123 2853818 2929043 U NO +NM_010212_Fhl2 chr1 43179941 43255166 - chr1 39492140 39492513 3687428 3762653 U NO +NM_010212_Fhl2 chr1 43179941 43255166 - chr1 36106813 36107058 7072883 7148108 U NO +NM_010231_Fmo1 chr1 164744557 164796721 - chr1 164215623 164215935 528622 580786 U NO +NM_010231_Fmo1 chr1 164744557 164796721 - chr1 163827897 163828062 916495 968659 U NO +NM_010231_Fmo1 chr1 164744557 164796721 - chr1 167222964 167223261 2426243 2426243 D NO +NM_010231_Fmo1 chr1 164744557 164796721 - chr1 167906284 167906554 3109563 3109563 D NO +NM_010233_Fn1 chr1 71632113 71736637 - chr1 72769824 72770056 1033187 1033187 D NO +NM_010233_Fn1 chr1 71632113 71736637 - chr1 72770058 72770226 1033421 1033421 D NO +NM_010233_Fn1 chr1 71632113 71736637 - chr1 72815517 72815742 1078880 1078880 D NO +NM_010233_Fn1 chr1 71632113 71736637 - chr1 75481920 75482054 3745283 3745283 D NO +NM_010262_Gbx2 chr1 91824531 91831059 - chr1 92070253 92070431 239194 239194 D NO +NM_010262_Gbx2 chr1 91824531 91831059 - chr1 91496155 91496319 328212 334740 U NO +NM_010262_Gbx2 chr1 91824531 91831059 - chr1 91496003 91496145 328386 334914 U NO +NM_010262_Gbx2 chr1 91824531 91831059 - chr1 90592499 90592629 1231902 1238430 U NO +NM_010267_Gdap1 chr1 17135463 17385513 + chr1 17030405 17030545 104918 104918 D NO +NM_010267_Gdap1 chr1 17135463 17385513 + chr1 13829227 13829564 3305899 3305899 D NO +NM_010267_Gdap1 chr1 17135463 17385513 + chr1 10617233 10617437 6518026 6518026 D NO +NM_010267_Gdap1 chr1 17135463 17385513 + chr1 24609562 24609623 7224049 7474099 U NO +NM_010341_Nmur1 chr1 88282479 88297441 - chr1 88408969 88409267 111528 111528 D NO +NM_010341_Nmur1 chr1 88282479 88297441 - chr1 89989553 89989714 1692112 1692112 D NO +NM_010341_Nmur1 chr1 88282479 88297441 - chr1 90412932 90413132 2115491 2115491 D NO +NM_010341_Nmur1 chr1 88282479 88297441 - chr1 90592499 90592629 2295058 2295058 D NO +NM_010472_Agfg1 chr1 82836048 82918151 + chr1 78630893 78631160 4204888 4204888 D NO +NM_010472_Agfg1 chr1 82836048 82918151 + chr1 77457642 77457791 5378257 5378257 D NO +NM_010472_Agfg1 chr1 82836048 82918151 + chr1 88408969 88409267 5490818 5572921 U NO +NM_010472_Agfg1 chr1 82836048 82918151 + chr1 89989553 89989714 7071402 7153505 U NO +NM_010476_Hsd17b7 chr1 171879671 171899542 - chr1 172620779 172620912 721237 721237 D NO +NM_010476_Hsd17b7 chr1 171879671 171899542 - chr1 172620917 172621080 721375 721375 D NO +NM_010476_Hsd17b7 chr1 171879671 171899542 - chr1 170255081 170255260 1624411 1644282 U NO +NM_010476_Hsd17b7 chr1 171879671 171899542 - chr1 174376470 174376659 2476928 2476928 D NO +NM_010483_Htr5b chr1 123406263 123425032 - chr1 120760212 120760461 2645802 2664571 U NO +NM_010483_Htr5b chr1 123406263 123425032 - chr1 132950929 132951247 9525897 9525897 D NO +NM_010483_Htr5b chr1 123406263 123425032 - chr1 133114860 133115015 9689828 9689828 D NO +NM_010483_Htr5b chr1 123406263 123425032 - chr1 135582677 135582828 12157645 12157645 D NO +NM_010500_Ier5 chr1 156943491 156946949 - chr1 158510523 158510813 1563574 1563574 D NO +NM_010500_Ier5 chr1 156943491 156946949 - chr1 158537267 158537411 1590318 1590318 D NO +NM_010500_Ier5 chr1 156943491 156946949 - chr1 158580638 158580759 1633689 1633689 D NO +NM_010500_Ier5 chr1 156943491 156946949 - chr1 155123313 155123435 1820056 1823514 U NO +NM_010518_Igfbp5 chr1 72904507 72921468 - chr1 72815517 72815742 88765 105726 U NO +NM_010518_Igfbp5 chr1 72904507 72921468 - chr1 72770058 72770226 134281 151242 U NO +NM_010518_Igfbp5 chr1 72904507 72921468 - chr1 72769824 72770056 134451 151412 U NO +NM_010518_Igfbp5 chr1 72904507 72921468 - chr1 75481920 75482054 2560452 2560452 D NO +NM_010544_Ihh chr1 74991633 75093213 - chr1 75481920 75482054 388707 388707 D NO +NM_010544_Ihh chr1 74991633 75093213 - chr1 72815517 72815742 2175891 2277471 U NO +NM_010544_Ihh chr1 74991633 75093213 - chr1 72770058 72770226 2221407 2322987 U NO +NM_010544_Ihh chr1 74991633 75093213 - chr1 72769824 72770056 2221577 2323157 U NO +NM_010548_Il10 chr1 132916424 132921547 + chr1 132950929 132951247 29382 34505 U NO +NM_010548_Il10 chr1 132916424 132921547 + chr1 133114860 133115015 193313 198436 U NO +NM_010548_Il10 chr1 132916424 132921547 + chr1 135582677 135582828 2661130 2666253 U NO +NM_010548_Il10 chr1 132916424 132921547 + chr1 135851853 135852218 2930306 2935429 U NO +NM_010552_Il17a chr1 20660053 20766059 + chr1 17030405 17030545 3629508 3629508 D NO +NM_010552_Il17a chr1 20660053 20766059 + chr1 24609562 24609623 3843503 3949509 U NO +NM_010552_Il17a chr1 20660053 20766059 + chr1 24609923 24609992 3843864 3949870 U NO +NM_010552_Il17a chr1 20660053 20766059 + chr1 24730996 24731077 3964937 4070943 U NO +NM_010553_Il18rap chr1 40572207 40606867 + chr1 40325917 40326123 246084 246084 D NO +NM_010553_Il18rap chr1 40572207 40606867 + chr1 39492140 39492513 1079694 1079694 D NO +NM_010553_Il18rap chr1 40572207 40606867 + chr1 44195449 44195639 3588582 3623242 U NO +NM_010553_Il18rap chr1 40572207 40606867 + chr1 36106813 36107058 4465149 4465149 D NO +NM_010555_Il1r2 chr1 40130058 40182052 + chr1 40325917 40326123 143865 195859 U NO +NM_010555_Il1r2 chr1 40130058 40182052 + chr1 39492140 39492513 637545 637545 D NO +NM_010555_Il1r2 chr1 40130058 40182052 + chr1 36106813 36107058 4023000 4023000 D NO +NM_010555_Il1r2 chr1 40130058 40182052 + chr1 44195449 44195639 4013397 4065391 U NO +NM_010564_Inha chr1 75503647 75506924 + chr1 75481920 75482054 21593 21593 D NO +NM_010564_Inha chr1 75503647 75506924 + chr1 77457642 77457791 1950718 1953995 U NO +NM_010564_Inha chr1 75503647 75506924 + chr1 72815517 72815742 2687905 2687905 D NO +NM_010564_Inha chr1 75503647 75506924 + chr1 72770058 72770226 2733421 2733421 D NO +NM_010566_Inpp5d chr1 89504177 89645401 + chr1 89989553 89989714 344152 485376 U NO +NM_010566_Inpp5d chr1 89504177 89645401 + chr1 90412932 90413132 767531 908755 U NO +NM_010566_Inpp5d chr1 89504177 89645401 + chr1 90592499 90592629 947098 1088322 U NO +NM_010566_Inpp5d chr1 89504177 89645401 + chr1 88408969 88409267 1094910 1094910 D NO +NM_010570_Irs1 chr1 82229682 82233665 + chr1 78630893 78631160 3598522 3598522 D NO +NM_010570_Irs1 chr1 82229682 82233665 + chr1 77457642 77457791 4771891 4771891 D NO +NM_010570_Irs1 chr1 82229682 82233665 + chr1 88408969 88409267 6175304 6179287 U NO +NM_010570_Irs1 chr1 82229682 82233665 + chr1 75481920 75482054 6747628 6747628 D NO +NM_010570_Irs1 chr1 82229686 82300552 - chr1 78630893 78631160 3598526 3669392 U NO +NM_010570_Irs1 chr1 82229686 82300552 - chr1 77457642 77457791 4771895 4842761 U NO +NM_010570_Irs1 chr1 82229686 82300552 - chr1 88408969 88409267 6108417 6108417 D NO +NM_010570_Irs1 chr1 82229686 82300552 - chr1 75481920 75482054 6747632 6818498 U NO +NM_010584_Itln1 chr1 173448254 173495879 - chr1 172620917 172621080 827174 874799 U NO +NM_010584_Itln1 chr1 173448254 173495879 - chr1 172620779 172620912 827342 874967 U NO +NM_010584_Itln1 chr1 173448254 173495879 - chr1 174376470 174376659 880591 880591 D NO +NM_010584_Itln1 chr1 173448254 173495879 - chr1 170255081 170255260 3192994 3240619 U NO +NM_010600_Kcnh1 chr1 194014507 194368391 + chr1 194258648 194259032 0 244141 . YES +NM_010600_Kcnh1 chr1 194014507 194368391 + chr1 194645118 194645475 276727 630611 U NO +NM_010600_Kcnh1 chr1 194014507 194368391 + chr1 194957396 194957723 589005 942889 U NO +NM_010600_Kcnh1 chr1 194014507 194368391 + chr1 195324443 195324741 956052 1309936 U NO +NM_010607_Kcnk2 chr1 191031813 191229415 - chr1 194258648 194259032 3029233 3029233 D NO +NM_010607_Kcnk2 chr1 191031813 191229415 - chr1 194645118 194645475 3415703 3415703 D NO +NM_010607_Kcnk2 chr1 191031813 191229415 - chr1 194957396 194957723 3727981 3727981 D NO +NM_010607_Kcnk2 chr1 191031813 191229415 - chr1 195324443 195324741 4095028 4095028 D NO +NM_010629_Kifap3 chr1 165671988 165847216 + chr1 164215623 164215935 1456053 1456053 D NO +NM_010629_Kifap3 chr1 165671988 165847216 + chr1 167222964 167223261 1375748 1550976 U NO +NM_010629_Kifap3 chr1 165671988 165847216 + chr1 163827897 163828062 1843926 1843926 D NO +NM_010629_Kifap3 chr1 165671988 165847216 + chr1 167906284 167906554 2059068 2234296 U NO +NM_010633_Uhmk1 chr1 172123558 172145524 - chr1 172620779 172620912 475255 475255 D NO +NM_010633_Uhmk1 chr1 172123558 172145524 - chr1 172620917 172621080 475393 475393 D NO +NM_010633_Uhmk1 chr1 172123558 172145524 - chr1 170255081 170255260 1868298 1890264 U NO +NM_010633_Uhmk1 chr1 172123558 172145524 - chr1 174376470 174376659 2230946 2230946 D NO +NM_010678_Aff3 chr1 38232856 38782360 - chr1 39492140 39492513 709780 709780 D NO +NM_010678_Aff3 chr1 38232856 38782360 - chr1 40325917 40326123 1543557 1543557 D NO +NM_010678_Aff3 chr1 38232856 38782360 - chr1 36106813 36107058 2125798 2675302 U NO +NM_010678_Aff3 chr1 38232856 38782360 - chr1 34206924 34207100 4025756 4575260 U NO +NM_010683_Lamc1 chr1 155065803 155179906 - chr1 155123313 155123435 0 56471 . YES +NM_010683_Lamc1 chr1 155065803 155179906 - chr1 154971572 154971673 94130 208233 U NO +NM_010683_Lamc1 chr1 155065803 155179906 - chr1 158510523 158510813 3330617 3330617 D NO +NM_010683_Lamc1 chr1 155065803 155179906 - chr1 158537267 158537411 3357361 3357361 D NO +NM_010712_Lhx4 chr1 157520057 157598794 - chr1 158510523 158510813 911729 911729 D NO +NM_010712_Lhx4 chr1 157520057 157598794 - chr1 158537267 158537411 938473 938473 D NO +NM_010712_Lhx4 chr1 157520057 157598794 - chr1 158580638 158580759 981844 981844 D NO +NM_010712_Lhx4 chr1 157520057 157598794 - chr1 158835251 158835391 1236457 1236457 D NO +NM_010732_Lrrn2 chr1 134776870 134865321 + chr1 135582677 135582828 717356 805807 U NO +NM_010732_Lrrn2 chr1 134776870 134865321 + chr1 135851853 135852218 986532 1074983 U NO +NM_010732_Lrrn2 chr1 134776870 134865321 + chr1 133114860 133115015 1661855 1661855 D NO +NM_010732_Lrrn2 chr1 134776870 134865321 + chr1 132950929 132951247 1825623 1825623 D NO +NM_010766_Marco chr1 122261022 122466383 - chr1 120760212 120760461 1500561 1705922 U NO +NM_010766_Marco chr1 122261022 122466383 - chr1 132950929 132951247 10484546 10484546 D NO +NM_010766_Marco chr1 122261022 122466383 - chr1 133114860 133115015 10648477 10648477 D NO +NM_010766_Marco chr1 122261022 122466383 - chr1 135582677 135582828 13116294 13116294 D NO +NM_010778_Cd46 chr1 196861976 196919007 - chr1 197057796 197057843 138789 138789 D NO +NM_010778_Cd46 chr1 196861976 196919007 - chr1 195384767 195385195 1476781 1533812 U NO +NM_010778_Cd46 chr1 196861976 196919007 - chr1 195342728 195342985 1518991 1576022 U NO +NM_010778_Cd46 chr1 196861976 196919007 - chr1 195338316 195338616 1523360 1580391 U NO +NM_010827_Msc chr1 14520272 14746075 - chr1 13829227 13829564 690708 916511 U NO +NM_010827_Msc chr1 14520272 14746075 - chr1 17030405 17030545 2284330 2284330 D NO +NM_010827_Msc chr1 14520272 14746075 - chr1 10617233 10617437 3902835 4128638 U NO +NM_010827_Msc chr1 14520272 14746075 - chr1 9619175 9619382 4900890 5126693 U NO +NM_010834_Mstn chr1 53118495 53124923 + chr1 52625416 52625560 492935 492935 D NO +NM_010834_Mstn chr1 53118495 53124923 + chr1 54631692 54631815 1506769 1513197 U NO +NM_010834_Mstn chr1 53118495 53124923 + chr1 55283572 55283675 2158649 2165077 U NO +NM_010834_Mstn chr1 53118495 53124923 + chr1 44195449 44195639 8922856 8922856 D NO +NM_010863_Myo1b chr1 51806622 51973696 - chr1 52625416 52625560 651720 651720 D NO +NM_010863_Myo1b chr1 51806622 51973696 - chr1 54631692 54631815 2657996 2657996 D NO +NM_010863_Myo1b chr1 51806622 51973696 - chr1 55283572 55283675 3309876 3309876 D NO +NM_010863_Myo1b chr1 51806622 51973696 - chr1 44195449 44195639 7610983 7778057 U NO +NM_010865_Myoc chr1 164569268 164581467 + chr1 164215623 164215935 353333 353333 D NO +NM_010865_Myoc chr1 164569268 164581467 + chr1 163827897 163828062 741206 741206 D NO +NM_010865_Myoc chr1 164569268 164581467 + chr1 167222964 167223261 2641497 2653696 U NO +NM_010865_Myoc chr1 164569268 164581467 + chr1 167906284 167906554 3324817 3337016 U NO +NM_010879_Nck2 chr1 43501442 43627345 + chr1 44195449 44195639 568104 694007 U NO +NM_010879_Nck2 chr1 43501442 43627345 + chr1 40325917 40326123 3175319 3175319 D NO +NM_010879_Nck2 chr1 43501442 43627345 + chr1 39492140 39492513 4008929 4008929 D NO +NM_010879_Nck2 chr1 43501442 43627345 + chr1 36106813 36107058 7394384 7394384 D NO +NM_010880_Ncl chr1 88241155 88255995 - chr1 88408969 88409267 152974 152974 D NO +NM_010880_Ncl chr1 88241155 88255995 - chr1 89989553 89989714 1733558 1733558 D NO +NM_010880_Ncl chr1 88241155 88255995 - chr1 90412932 90413132 2156937 2156937 D NO +NM_010880_Ncl chr1 88241155 88255995 - chr1 90592499 90592629 2336504 2336504 D NO +NM_010892_Nek2 chr1 193645343 193656921 + chr1 194258648 194259032 601727 613305 U NO +NM_010892_Nek2 chr1 193645343 193656921 + chr1 194645118 194645475 988197 999775 U NO +NM_010892_Nek2 chr1 193645343 193656921 + chr1 194957396 194957723 1300475 1312053 U NO +NM_010892_Nek2 chr1 193645343 193656921 + chr1 195324443 195324741 1667522 1679100 U NO +NM_010916_Nhlh1 chr1 173982425 173987707 - chr1 174376470 174376659 388763 388763 D NO +NM_010916_Nhlh1 chr1 173982425 173987707 - chr1 172620917 172621080 1361345 1366627 U NO +NM_010916_Nhlh1 chr1 173982425 173987707 - chr1 172620779 172620912 1361513 1366795 U NO +NM_010916_Nhlh1 chr1 173982425 173987707 - chr1 170255081 170255260 3727165 3732447 U NO +NM_010933_Nppc chr1 88512597 88567147 - chr1 88408969 88409267 103330 157880 U NO +NM_010933_Nppc chr1 88512597 88567147 - chr1 89989553 89989714 1422406 1422406 D NO +NM_010933_Nppc chr1 88512597 88567147 - chr1 90412932 90413132 1845785 1845785 D NO +NM_010933_Nppc chr1 88512597 88567147 - chr1 90592499 90592629 2025352 2025352 D NO +NM_011011_Oprk1 chr1 5578025 5596202 + chr1 9619046 9619167 4022844 4041021 U NO +NM_011011_Oprk1 chr1 5578025 5596202 + chr1 9619175 9619382 4022973 4041150 U NO +NM_011011_Oprk1 chr1 5578025 5596202 + chr1 10617233 10617437 5021031 5039208 U NO +NM_011011_Oprk1 chr1 5578025 5596202 + chr1 13829227 13829564 8233025 8251202 U NO +NM_011063_Pea15a chr1 174126043 174136915 - chr1 174376470 174376659 239555 239555 D NO +NM_011063_Pea15a chr1 174126043 174136915 - chr1 172620917 172621080 1504963 1515835 U NO +NM_011063_Pea15a chr1 174126043 174136915 - chr1 172620779 172620912 1505131 1516003 U NO +NM_011063_Pea15a chr1 174126043 174136915 - chr1 170255081 170255260 3870783 3881655 U NO +NM_011066_Per2 chr1 93312559 93386413 - chr1 92070253 92070431 1242128 1315982 U NO +NM_011066_Per2 chr1 93312559 93386413 - chr1 95186508 95186637 1800095 1800095 D NO +NM_011066_Per2 chr1 93312559 93386413 - chr1 91496155 91496319 1816240 1890094 U NO +NM_011066_Per2 chr1 93312559 93386413 - chr1 91496003 91496145 1816414 1890268 U NO +NM_011070_Pfdn2 chr1 173275115 173289384 + chr1 172620917 172621080 654035 654035 D NO +NM_011070_Pfdn2 chr1 173275115 173289384 + chr1 172620779 172620912 654203 654203 D NO +NM_011070_Pfdn2 chr1 173275115 173289384 + chr1 174376470 174376659 1087086 1101355 U NO +NM_011070_Pfdn2 chr1 173275115 173289384 + chr1 170255081 170255260 3019855 3019855 D NO +NM_011082_Pigr chr1 132723238 132748826 + chr1 132950929 132951247 202103 227691 U NO +NM_011082_Pigr chr1 132723238 132748826 + chr1 133114860 133115015 366034 391622 U NO +NM_011082_Pigr chr1 132723238 132748826 + chr1 135582677 135582828 2833851 2859439 U NO +NM_011082_Pigr chr1 132723238 132748826 + chr1 135851853 135852218 3103027 3128615 U NO +NM_011086_Pikfyve chr1 65225807 65332228 + chr1 63664888 63665018 1560789 1560789 D NO +NM_011086_Pikfyve chr1 65225807 65332228 + chr1 72769824 72770056 7437596 7544017 U NO +NM_011086_Pikfyve chr1 65225807 65332228 + chr1 72770058 72770226 7437830 7544251 U NO +NM_011086_Pikfyve chr1 65225807 65332228 + chr1 72815517 72815742 7483289 7589710 U NO +NM_011111_Serpinb2 chr1 109407675 109422169 + chr1 108747519 108747791 659884 659884 D NO +NM_011111_Serpinb2 chr1 109407675 109422169 + chr1 120760212 120760461 11338043 11352537 U NO +NM_011111_Serpinb2 chr1 109407675 109422169 + chr1 95186508 95186637 14221038 14221038 D NO +NM_011111_Serpinb2 chr1 109407675 109422169 + chr1 92070253 92070431 17337244 17337244 D NO +NM_011198_Ptgs2 chr1 151947054 152026155 + chr1 154971572 154971673 2945417 3024518 U NO +NM_011198_Ptgs2 chr1 151947054 152026155 + chr1 155123313 155123435 3097158 3176259 U NO +NM_011198_Ptgs2 chr1 151947054 152026155 + chr1 145591041 145591176 6355878 6355878 D NO +NM_011198_Ptgs2 chr1 151947054 152026155 + chr1 158510523 158510813 6484368 6563469 U NO +NM_011206_Ptpn18 chr1 34516613 34532568 + chr1 34206924 34207100 309513 309513 D NO +NM_011206_Ptpn18 chr1 34516613 34532568 + chr1 36106813 36107058 1574245 1590200 U NO +NM_011206_Ptpn18 chr1 34516613 34532568 + chr1 39492140 39492513 4959572 4975527 U NO +NM_011206_Ptpn18 chr1 34516613 34532568 + chr1 40325917 40326123 5793349 5809304 U NO +NM_011267_Rgs16 chr1 155574693 155592596 + chr1 155123313 155123435 451258 451258 D NO +NM_011267_Rgs16 chr1 155574693 155592596 + chr1 154971572 154971673 603020 603020 D NO +NM_011267_Rgs16 chr1 155574693 155592596 + chr1 158510523 158510813 2917927 2935830 U NO +NM_011267_Rgs16 chr1 155574693 155592596 + chr1 158537267 158537411 2944671 2962574 U NO +NM_011273_Xpr1 chr1 157103002 157264554 - chr1 158510523 158510813 1245969 1245969 D NO +NM_011273_Xpr1 chr1 157103002 157264554 - chr1 158537267 158537411 1272713 1272713 D NO +NM_011273_Xpr1 chr1 157103002 157264554 - chr1 158580638 158580759 1316084 1316084 D NO +NM_011273_Xpr1 chr1 157103002 157264554 - chr1 158835251 158835391 1570697 1570697 D NO +NM_011277_Rnf2 chr1 153305192 153359013 - chr1 154971572 154971673 1612559 1612559 D NO +NM_011277_Rnf2 chr1 153305192 153359013 - chr1 155123313 155123435 1764300 1764300 D NO +NM_011277_Rnf2 chr1 153305192 153359013 - chr1 158510523 158510813 5151510 5151510 D NO +NM_011277_Rnf2 chr1 153305192 153359013 - chr1 158537267 158537411 5178254 5178254 D NO +NM_011283_Rp1 chr1 3989638 4469288 - chr1 9619046 9619167 5149758 5149758 D NO +NM_011283_Rp1 chr1 3989638 4469288 - chr1 9619175 9619382 5149887 5149887 D NO +NM_011283_Rp1 chr1 3989638 4469288 - chr1 10617233 10617437 6147945 6147945 D NO +NM_011283_Rp1 chr1 3989638 4469288 - chr1 13829227 13829564 9359939 9359939 D NO +NM_011318_Apcs chr1 174824092 174855560 - chr1 174376470 174376659 447433 478901 U NO +NM_011318_Apcs chr1 174824092 174855560 - chr1 172620917 172621080 2203012 2234480 U NO +NM_011318_Apcs chr1 174824092 174855560 - chr1 172620779 172620912 2203180 2234648 U NO +NM_011318_Apcs chr1 174824092 174855560 - chr1 170255081 170255260 4568832 4600300 U NO +NM_011345_Sele chr1 165978323 165988607 + chr1 167222964 167223261 1234357 1244641 U NO +NM_011345_Sele chr1 165978323 165988607 + chr1 164215623 164215935 1762388 1762388 D NO +NM_011345_Sele chr1 165978323 165988607 + chr1 167906284 167906554 1917677 1927961 U NO +NM_011345_Sele chr1 165978323 165988607 + chr1 163827897 163828062 2150261 2150261 D NO +NM_011346_Sell chr1 165992132 166007817 + chr1 167222964 167223261 1215147 1230832 U NO +NM_011346_Sell chr1 165992132 166007817 + chr1 164215623 164215935 1776197 1776197 D NO +NM_011346_Sell chr1 165992132 166007817 + chr1 167906284 167906554 1898467 1914152 U NO +NM_011346_Sell chr1 165992132 166007817 + chr1 163827897 163828062 2164070 2164070 D NO +NM_011347_Selp chr1 166045416 166080154 + chr1 167222964 167223261 1142810 1177548 U NO +NM_011347_Selp chr1 166045416 166080154 + chr1 164215623 164215935 1829481 1829481 D NO +NM_011347_Selp chr1 166045416 166080154 + chr1 167906284 167906554 1826130 1860868 U NO +NM_011347_Selp chr1 166045416 166080154 + chr1 163827897 163828062 2217354 2217354 D NO +NM_011439_Sox13 chr1 135278853 135384763 - chr1 135582677 135582828 197914 197914 D NO +NM_011439_Sox13 chr1 135278853 135384763 - chr1 135851853 135852218 467090 467090 D NO +NM_011439_Sox13 chr1 135278853 135384763 - chr1 136956468 136956598 1571705 1571705 D NO +NM_011439_Sox13 chr1 135278853 135384763 - chr1 133114860 133115015 2163838 2269748 U NO +NM_011441_Sox17 chr1 4481009 4487839 - chr1 9619046 9619167 5131207 5131207 D NO +NM_011441_Sox17 chr1 4481009 4487839 - chr1 9619175 9619382 5131336 5131336 D NO +NM_011441_Sox17 chr1 4481009 4487839 - chr1 10617233 10617437 6129394 6129394 D NO +NM_011441_Sox17 chr1 4481009 4487839 - chr1 13829227 13829564 9341388 9341388 D NO +NM_011459_Serpinb8 chr1 109486542 109586251 + chr1 108747519 108747791 738751 738751 D NO +NM_011459_Serpinb8 chr1 109486542 109586251 + chr1 120760212 120760461 11173961 11273670 U NO +NM_011459_Serpinb8 chr1 109486542 109586251 + chr1 95186508 95186637 14299905 14299905 D NO +NM_011459_Serpinb8 chr1 109486542 109586251 + chr1 92070253 92070431 17416111 17416111 D NO +NM_011465_Spna1 chr1 176102906 176178561 + chr1 174376470 174376659 1726247 1726247 D NO +NM_011465_Spna1 chr1 176102906 176178561 + chr1 172620917 172621080 3481826 3481826 D NO +NM_011465_Spna1 chr1 176102906 176178561 + chr1 172620779 172620912 3481994 3481994 D NO +NM_011465_Spna1 chr1 176102906 176178561 + chr1 181061299 181061446 4882738 4958393 U NO +NM_011487_Stat4 chr1 52036485 52164030 + chr1 52625416 52625560 461386 588931 U NO +NM_011487_Stat4 chr1 52036485 52164030 + chr1 54631692 54631815 2467662 2595207 U NO +NM_011487_Stat4 chr1 52036485 52164030 + chr1 55283572 55283675 3119542 3247087 U NO +NM_011487_Stat4 chr1 52036485 52164030 + chr1 44195449 44195639 7840846 7840846 D NO +NM_011494_Stk16 chr1 75207414 75212181 + chr1 75481920 75482054 269739 274506 U NO +NM_011494_Stk16 chr1 75207414 75212181 + chr1 77457642 77457791 2245461 2250228 U NO +NM_011494_Stk16 chr1 75207414 75212181 + chr1 72815517 72815742 2391672 2391672 D NO +NM_011494_Stk16 chr1 75207414 75212181 + chr1 72770058 72770226 2437188 2437188 D NO +NM_011541_Tcea1 chr1 4847584 4889703 + chr1 9619046 9619167 4729343 4771462 U NO +NM_011541_Tcea1 chr1 4847584 4889703 + chr1 9619175 9619382 4729472 4771591 U NO +NM_011541_Tcea1 chr1 4847584 4889703 + chr1 10617233 10617437 5727530 5769649 U NO +NM_011541_Tcea1 chr1 4847584 4889703 + chr1 13829227 13829564 8939524 8981643 U NO +NM_011590_Timm17a chr1 137197272 137210335 - chr1 136956468 136956598 240674 253737 U NO +NM_011590_Timm17a chr1 137197272 137210335 - chr1 138437726 138437860 1227391 1227391 D NO +NM_011590_Timm17a chr1 137197272 137210335 - chr1 135851853 135852218 1345054 1358117 U NO +NM_011590_Timm17a chr1 137197272 137210335 - chr1 135582677 135582828 1614444 1627507 U NO +NM_011633_Traf5 chr1 193821096 193916369 - chr1 194258648 194259032 342279 342279 D NO +NM_011633_Traf5 chr1 193821096 193916369 - chr1 194645118 194645475 728749 728749 D NO +NM_011633_Traf5 chr1 193821096 193916369 - chr1 194957396 194957723 1041027 1041027 D NO +NM_011633_Traf5 chr1 193821096 193916369 - chr1 195324443 195324741 1408074 1408074 D NO +NM_011650_Tsn chr1 120194658 120208016 - chr1 120760212 120760461 552196 552196 D NO +NM_011650_Tsn chr1 120194658 120208016 - chr1 108747519 108747791 11446867 11460225 U NO +NM_011650_Tsn chr1 120194658 120208016 - chr1 132950929 132951247 12742913 12742913 D NO +NM_011650_Tsn chr1 120194658 120208016 - chr1 133114860 133115015 12906844 12906844 D NO +NM_011729_Ercc5 chr1 44204270 44256568 + chr1 44195449 44195639 8631 8631 D NO +NM_011729_Ercc5 chr1 44204270 44256568 + chr1 40325917 40326123 3878147 3878147 D NO +NM_011729_Ercc5 chr1 44204270 44256568 + chr1 39492140 39492513 4711757 4711757 D NO +NM_011729_Ercc5 chr1 44204270 44256568 + chr1 36106813 36107058 8097212 8097212 D NO +NM_011770_Ikzf2 chr1 69574124 69733875 - chr1 72769824 72770056 3035949 3035949 D NO +NM_011770_Ikzf2 chr1 69574124 69733875 - chr1 72770058 72770226 3036183 3036183 D NO +NM_011770_Ikzf2 chr1 69574124 69733875 - chr1 72815517 72815742 3081642 3081642 D NO +NM_011770_Ikzf2 chr1 69574124 69733875 - chr1 75481920 75482054 5748045 5748045 D NO +NM_011780_Adam23 chr1 63482194 63639230 + chr1 63664888 63665018 25658 182694 U NO +NM_011780_Adam23 chr1 63482194 63639230 + chr1 55283572 55283675 8198519 8198519 D NO +NM_011780_Adam23 chr1 63482194 63639230 + chr1 54631692 54631815 8850379 8850379 D NO +NM_011780_Adam23 chr1 63482194 63639230 + chr1 72769824 72770056 9130594 9287630 U NO +NM_011780_Adam23 chr1 63640970 63642850 + chr1 63664888 63665018 22038 23918 U NO +NM_011780_Adam23 chr1 63640970 63642850 + chr1 55283572 55283675 8357295 8357295 D NO +NM_011780_Adam23 chr1 63640970 63642850 + chr1 54631692 54631815 9009155 9009155 D NO +NM_011780_Adam23 chr1 63640970 63642850 + chr1 72769824 72770056 9126974 9128854 U NO +NM_011785_Akt3 chr1 178940936 179188314 - chr1 181061299 181061446 1872985 1872985 D NO +NM_011785_Akt3 chr1 178940936 179188314 - chr1 182479646 182479905 3291332 3291332 D NO +NM_011785_Akt3 chr1 178940936 179188314 - chr1 174376470 174376659 4564277 4811655 U NO +NM_011785_Akt3 chr1 178940936 179188314 - chr1 172620917 172621080 6319856 6567234 U NO +NM_011794_Bpnt1 chr1 187156058 187181696 + chr1 185854947 185855105 1300953 1300953 D NO +NM_011794_Bpnt1 chr1 187156058 187181696 + chr1 182479646 182479905 4676153 4676153 D NO +NM_011794_Bpnt1 chr1 187156058 187181696 + chr1 181061299 181061446 6094612 6094612 D NO +NM_011794_Bpnt1 chr1 187156058 187181696 + chr1 194258648 194259032 7076952 7102590 U NO +NM_011796_Capn10 chr1 94830953 94844518 + chr1 95186508 95186637 341990 355555 U NO +NM_011796_Capn10 chr1 94830953 94844518 + chr1 92070253 92070431 2760522 2760522 D NO +NM_011796_Capn10 chr1 94830953 94844518 + chr1 91496155 91496319 3334634 3334634 D NO +NM_011796_Capn10 chr1 94830953 94844518 + chr1 91496003 91496145 3334808 3334808 D NO +NM_011800_Cdh20 chr1 106665116 106892058 + chr1 108747519 108747791 1855461 2082403 U NO +NM_011800_Cdh20 chr1 106665116 106892058 + chr1 95186508 95186637 11478479 11478479 D NO +NM_011800_Cdh20 chr1 106665116 106892058 + chr1 120760212 120760461 13868154 14095096 U NO +NM_011800_Cdh20 chr1 106665116 106892058 + chr1 92070253 92070431 14594685 14594685 D NO +NM_011804_Creg1 chr1 167693878 167710825 + chr1 167906284 167906554 195459 212406 U NO +NM_011804_Creg1 chr1 167693878 167710825 + chr1 167222964 167223261 470617 470617 D NO +NM_011804_Creg1 chr1 167693878 167710825 + chr1 170255081 170255260 2544256 2561203 U NO +NM_011804_Creg1 chr1 167693878 167710825 + chr1 164215623 164215935 3477943 3477943 D NO +NM_011811_Farsb chr1 78414533 78506689 - chr1 78630893 78631160 124204 124204 D NO +NM_011811_Farsb chr1 78414533 78506689 - chr1 77457642 77457791 956742 1048898 U NO +NM_011811_Farsb chr1 78414533 78506689 - chr1 75481920 75482054 2932479 3024635 U NO +NM_011811_Farsb chr1 78414533 78506689 - chr1 72815517 72815742 5598791 5690947 U NO +NM_011825_Grem2 chr1 176763926 176859770 - chr1 174376470 174376659 2387267 2483111 U NO +NM_011825_Grem2 chr1 176763926 176859770 - chr1 181061299 181061446 4201529 4201529 D NO +NM_011825_Grem2 chr1 176763926 176859770 - chr1 172620917 172621080 4142846 4238690 U NO +NM_011825_Grem2 chr1 176763926 176859770 - chr1 172620779 172620912 4143014 4238858 U NO +NM_011880_Rgs7 chr1 176989221 177422985 - chr1 174376470 174376659 2612562 3046326 U NO +NM_011880_Rgs7 chr1 176989221 177422985 - chr1 181061299 181061446 3638314 3638314 D NO +NM_011880_Rgs7 chr1 176989221 177422985 - chr1 172620917 172621080 4368141 4801905 U NO +NM_011880_Rgs7 chr1 176989221 177422985 - chr1 172620779 172620912 4368309 4802073 U NO +NM_011882_Rnasel chr1 155596576 155619417 + chr1 155123313 155123435 473141 473141 D NO +NM_011882_Rnasel chr1 155596576 155619417 + chr1 154971572 154971673 624903 624903 D NO +NM_011882_Rnasel chr1 155596576 155619417 + chr1 158510523 158510813 2891106 2913947 U NO +NM_011882_Rnasel chr1 155596576 155619417 + chr1 158537267 158537411 2917850 2940691 U NO +NM_011931_Rfwd2 chr1 161159948 161307408 + chr1 159240736 159240866 1919082 1919082 D NO +NM_011931_Rfwd2 chr1 161159948 161307408 + chr1 158835251 158835391 2324557 2324557 D NO +NM_011931_Rfwd2 chr1 161159948 161307408 + chr1 158580638 158580759 2579189 2579189 D NO +NM_011931_Rfwd2 chr1 161159948 161307408 + chr1 158537267 158537411 2622537 2622537 D NO +NM_011935_Esrrg chr1 189432683 190062059 + chr1 185854947 185855105 3577578 3577578 D NO +NM_011935_Esrrg chr1 189432683 190062059 + chr1 194258648 194259032 4196589 4825965 U NO +NM_011935_Esrrg chr1 189432683 190062059 + chr1 194645118 194645475 4583059 5212435 U NO +NM_011935_Esrrg chr1 189432683 190062059 + chr1 194957396 194957723 4895337 5524713 U NO +NM_012009_Sh2d1b1 chr1 172162900 172220030 + chr1 172620779 172620912 400749 457879 U NO +NM_012009_Sh2d1b1 chr1 172162900 172220030 + chr1 172620917 172621080 400887 458017 U NO +NM_012009_Sh2d1b1 chr1 172162900 172220030 + chr1 170255081 170255260 1907640 1907640 D NO +NM_012009_Sh2d1b1 chr1 172162900 172220030 + chr1 174376470 174376659 2156440 2213570 U NO +NM_012012_Exo1 chr1 177810732 177841721 + chr1 181061299 181061446 3219578 3250567 U NO +NM_012012_Exo1 chr1 177810732 177841721 + chr1 174376470 174376659 3434073 3434073 D NO +NM_012012_Exo1 chr1 177810732 177841721 + chr1 182479646 182479905 4637925 4668914 U NO +NM_012012_Exo1 chr1 177810732 177841721 + chr1 172620917 172621080 5189652 5189652 D NO +NM_012049_Nit1 chr1 173270709 173276021 - chr1 172620917 172621080 649629 654941 U NO +NM_012049_Nit1 chr1 173270709 173276021 - chr1 172620779 172620912 649797 655109 U NO +NM_012049_Nit1 chr1 173270709 173276021 - chr1 174376470 174376659 1100449 1100449 D NO +NM_012049_Nit1 chr1 173270709 173276021 - chr1 170255081 170255260 3015449 3020761 U NO +NM_012058_Srp9 chr1 183988019 184062514 + chr1 182479646 182479905 1508114 1508114 D NO +NM_012058_Srp9 chr1 183988019 184062514 + chr1 185854947 185855105 1792433 1866928 U NO +NM_012058_Srp9 chr1 183988019 184062514 + chr1 181061299 181061446 2926573 2926573 D NO +NM_012058_Srp9 chr1 183988019 184062514 + chr1 174376470 174376659 9611360 9611360 D NO +NM_013474_Apoa2 chr1 173151908 173156502 + chr1 172620917 172621080 530828 530828 D NO +NM_013474_Apoa2 chr1 173151908 173156502 + chr1 172620779 172620912 530996 530996 D NO +NM_013474_Apoa2 chr1 173151908 173156502 + chr1 174376470 174376659 1219968 1224562 U NO +NM_013474_Apoa2 chr1 173151908 173156502 + chr1 170255081 170255260 2896648 2896648 D NO +NM_013489_Cd84 chr1 173769848 173820852 + chr1 174376470 174376659 555618 606622 U NO +NM_013489_Cd84 chr1 173769848 173820852 + chr1 172620917 172621080 1148768 1148768 D NO +NM_013489_Cd84 chr1 173769848 173820852 + chr1 172620779 172620912 1148936 1148936 D NO +NM_013489_Cd84 chr1 173769848 173820852 + chr1 170255081 170255260 3514588 3514588 D NO +NM_013499_Cr1l chr1 196924298 196957754 - chr1 197057796 197057843 100042 100042 D NO +NM_013499_Cr1l chr1 196924298 196957754 - chr1 195384767 195385195 1539103 1572559 U NO +NM_013499_Cr1l chr1 196924298 196957754 - chr1 195342728 195342985 1581313 1614769 U NO +NM_013499_Cr1l chr1 196924298 196957754 - chr1 195338316 195338616 1585682 1619138 U NO +NM_013612_Slc11a1 chr1 74421758 74433050 + chr1 75481920 75482054 1048870 1060162 U NO +NM_013612_Slc11a1 chr1 74421758 74433050 + chr1 72815517 72815742 1606016 1606016 D NO +NM_013612_Slc11a1 chr1 74421758 74433050 + chr1 72770058 72770226 1651532 1651532 D NO +NM_013612_Slc11a1 chr1 74421758 74433050 + chr1 72769824 72770056 1651702 1651702 D NO +NM_013626_Pam chr1 99691711 100053468 - chr1 95186508 95186637 4505074 4866831 U NO +NM_013626_Pam chr1 99691711 100053468 - chr1 92070253 92070431 7621280 7983037 U NO +NM_013626_Pam chr1 99691711 100053468 - chr1 91496155 91496319 8195392 8557149 U NO +NM_013626_Pam chr1 99691711 100053468 - chr1 91496003 91496145 8195566 8557323 U NO +NM_013673_Sp100 chr1 84943347 87618694 + chr1 88408969 88409267 790275 3465622 U NO +NM_013673_Sp100 chr1 84943347 87618694 + chr1 89989553 89989714 2370859 5046206 U NO +NM_013673_Sp100 chr1 84943347 87618694 + chr1 90412932 90413132 2794238 5469585 U NO +NM_013673_Sp100 chr1 84943347 87618694 + chr1 90592499 90592629 2973805 5649152 U NO +NM_013715_Cops5 chr1 10014683 10028315 - chr1 9619175 9619382 395301 408933 U NO +NM_013715_Cops5 chr1 10014683 10028315 - chr1 9619046 9619167 395516 409148 U NO +NM_013715_Cops5 chr1 10014683 10028315 - chr1 10617233 10617437 588918 588918 D NO +NM_013715_Cops5 chr1 10014683 10028315 - chr1 13829227 13829564 3800912 3800912 D NO +NM_013729_Mixl1 chr1 182623184 182634680 - chr1 182479646 182479905 143279 154775 U NO +NM_013729_Mixl1 chr1 182623184 182634680 - chr1 181061299 181061446 1561738 1573234 U NO +NM_013729_Mixl1 chr1 182623184 182634680 - chr1 185854947 185855105 3220267 3220267 D NO +NM_013729_Mixl1 chr1 182623184 182634680 - chr1 174376470 174376659 8246525 8258021 U NO +NM_013730_Slamf1 chr1 173682982 173731471 + chr1 174376470 174376659 644999 693488 U NO +NM_013730_Slamf1 chr1 173682982 173731471 + chr1 172620917 172621080 1061902 1061902 D NO +NM_013730_Slamf1 chr1 173682982 173731471 + chr1 172620779 172620912 1062070 1062070 D NO +NM_013730_Slamf1 chr1 173682982 173731471 + chr1 170255081 170255260 3427722 3427722 D NO +NM_013750_Phlda3 chr1 137662671 137665710 + chr1 136956468 136956598 706073 706073 D NO +NM_013750_Phlda3 chr1 137662671 137665710 + chr1 138437726 138437860 772016 775055 U NO +NM_013750_Phlda3 chr1 137662671 137665710 + chr1 135851853 135852218 1810453 1810453 D NO +NM_013750_Phlda3 chr1 137662671 137665710 + chr1 135582677 135582828 2079843 2079843 D NO +NM_013784_Pign chr1 107385512 107560244 - chr1 108747519 108747791 1187275 1187275 D NO +NM_013784_Pign chr1 107385512 107560244 - chr1 95186508 95186637 12198875 12373607 U NO +NM_013784_Pign chr1 107385512 107560244 - chr1 120760212 120760461 13199968 13199968 D NO +NM_013784_Pign chr1 107385512 107560244 - chr1 92070253 92070431 15315081 15489813 U NO +NM_013835_Trove2 chr1 145597816 145624178 - chr1 145591041 145591176 6640 33002 U NO +NM_013835_Trove2 chr1 145597816 145624178 - chr1 140381656 140381785 5216031 5242393 U NO +NM_013835_Trove2 chr1 145597816 145624178 - chr1 138437726 138437860 7159956 7186318 U NO +NM_013835_Trove2 chr1 145597816 145624178 - chr1 136956468 136956598 8641218 8667580 U NO +NM_013862_Rabgap1l chr1 162149308 162739582 - chr1 163827897 163828062 1088315 1088315 D NO +NM_013862_Rabgap1l chr1 162149308 162739582 - chr1 164215623 164215935 1476041 1476041 D NO +NM_013862_Rabgap1l chr1 162149308 162739582 - chr1 159240736 159240866 2908442 3498716 U NO +NM_013862_Rabgap1l chr1 162149308 162739582 - chr1 158835251 158835391 3313917 3904191 U NO +NM_013919_Usp21 chr1 173212080 173218102 - chr1 172620917 172621080 591000 597022 U NO +NM_013919_Usp21 chr1 173212080 173218102 - chr1 172620779 172620912 591168 597190 U NO +NM_013919_Usp21 chr1 173212080 173218102 - chr1 174376470 174376659 1158368 1158368 D NO +NM_013919_Usp21 chr1 173212080 173218102 - chr1 170255081 170255260 2956820 2962842 U NO +NM_015750_Neu2 chr1 89348720 89494397 + chr1 89989553 89989714 495156 640833 U NO +NM_015750_Neu2 chr1 89348720 89494397 + chr1 88408969 88409267 939453 939453 D NO +NM_015750_Neu2 chr1 89348720 89494397 + chr1 90412932 90413132 918535 1064212 U NO +NM_015750_Neu2 chr1 89348720 89494397 + chr1 90592499 90592629 1098102 1243779 U NO +NM_015780_Cfhr1 chr1 141443639 141456806 - chr1 140381656 140381785 1061854 1075021 U NO +NM_015780_Cfhr1 chr1 141443639 141456806 - chr1 138437726 138437860 3005779 3018946 U NO +NM_015780_Cfhr1 chr1 141443639 141456806 - chr1 145591041 145591176 4134235 4134235 D NO +NM_015780_Cfhr1 chr1 141443639 141456806 - chr1 136956468 136956598 4487041 4500208 U NO +NM_015811_Rgs1 chr1 146060709 146118313 - chr1 145591041 145591176 469533 527137 U NO +NM_015811_Rgs1 chr1 146060709 146118313 - chr1 140381656 140381785 5678924 5736528 U NO +NM_015811_Rgs1 chr1 146060709 146118313 - chr1 138437726 138437860 7622849 7680453 U NO +NM_015811_Rgs1 chr1 146060709 146118313 - chr1 154971572 154971673 8853259 8853259 D NO +NM_015818_Hs6st1 chr1 36125255 36163289 + chr1 36106813 36107058 18197 18197 D NO +NM_015818_Hs6st1 chr1 36125255 36163289 + chr1 34206924 34207100 1918155 1918155 D NO +NM_015818_Hs6st1 chr1 36125255 36163289 + chr1 39492140 39492513 3328851 3366885 U NO +NM_015818_Hs6st1 chr1 36125255 36163289 + chr1 40325917 40326123 4162628 4200662 U NO +NM_016696_Gpc1 chr1 94728253 94757346 + chr1 95186508 95186637 429162 458255 U NO +NM_016696_Gpc1 chr1 94728253 94757346 + chr1 92070253 92070431 2657822 2657822 D NO +NM_016696_Gpc1 chr1 94728253 94757346 + chr1 91496155 91496319 3231934 3231934 D NO +NM_016696_Gpc1 chr1 94728253 94757346 + chr1 91496003 91496145 3232108 3232108 D NO +NM_016702_Agxt chr1 95031777 95041991 + chr1 95186508 95186637 144517 154731 U NO +NM_016702_Agxt chr1 95031777 95041991 + chr1 92070253 92070431 2961346 2961346 D NO +NM_016702_Agxt chr1 95031777 95041991 + chr1 91496155 91496319 3535458 3535458 D NO +NM_016702_Agxt chr1 95031777 95041991 + chr1 91496003 91496145 3535632 3535632 D NO +NM_016716_Cul3 chr1 80261498 80323399 - chr1 78630893 78631160 1630338 1692239 U NO +NM_016716_Cul3 chr1 80261498 80323399 - chr1 77457642 77457791 2803707 2865608 U NO +NM_016716_Cul3 chr1 80261498 80323399 - chr1 75481920 75482054 4779444 4841345 U NO +NM_016716_Cul3 chr1 80261498 80323399 - chr1 72815517 72815742 7445756 7507657 U NO +NM_016717_Scly chr1 93192544 93217635 + chr1 92070253 92070431 1122113 1122113 D NO +NM_016717_Scly chr1 93192544 93217635 + chr1 91496155 91496319 1696225 1696225 D NO +NM_016717_Scly chr1 93192544 93217635 + chr1 91496003 91496145 1696399 1696399 D NO +NM_016717_Scly chr1 93192544 93217635 + chr1 95186508 95186637 1968873 1993964 U NO +NM_016749_Mybph chr1 136090025 136097809 + chr1 135851853 135852218 237807 237807 D NO +NM_016749_Mybph chr1 136090025 136097809 + chr1 135582677 135582828 507197 507197 D NO +NM_016749_Mybph chr1 136090025 136097809 + chr1 136956468 136956598 858659 866443 U NO +NM_016749_Mybph chr1 136090025 136097809 + chr1 138437726 138437860 2339917 2347701 U NO +NM_016778_Bok chr1 95579016 95592340 + chr1 95186508 95186637 392379 392379 D NO +NM_016778_Bok chr1 95579016 95592340 + chr1 92070253 92070431 3508585 3508585 D NO +NM_016778_Bok chr1 95579016 95592340 + chr1 91496155 91496319 4082697 4082697 D NO +NM_016778_Bok chr1 95579016 95592340 + chr1 91496003 91496145 4082871 4082871 D NO +NM_016796_Vamp4 chr1 164500371 164532593 + chr1 164215623 164215935 284436 284436 D NO +NM_016796_Vamp4 chr1 164500371 164532593 + chr1 163827897 163828062 672309 672309 D NO +NM_016796_Vamp4 chr1 164500371 164532593 + chr1 167222964 167223261 2690371 2722593 U NO +NM_016796_Vamp4 chr1 164500371 164532593 + chr1 167906284 167906554 3373691 3405913 U NO +NM_016805_Hnrnpu chr1 180251245 180298730 - chr1 181061299 181061446 762569 762569 D NO +NM_016805_Hnrnpu chr1 180251245 180298730 - chr1 182479646 182479905 2180916 2180916 D NO +NM_016805_Hnrnpu chr1 180251245 180298730 - chr1 185854947 185855105 5556217 5556217 D NO +NM_016805_Hnrnpu chr1 180251245 180298730 - chr1 174376470 174376659 5874586 5922071 U NO +NM_016846_Rgl1 chr1 154357421 154613475 - chr1 154971572 154971673 358097 358097 D NO +NM_016846_Rgl1 chr1 154357421 154613475 - chr1 155123313 155123435 509838 509838 D NO +NM_016846_Rgl1 chr1 154357421 154613475 - chr1 158510523 158510813 3897048 3897048 D NO +NM_016846_Rgl1 chr1 154357421 154613475 - chr1 158537267 158537411 3923792 3923792 D NO +NM_016851_Irf6 chr1 194979326 194998230 + chr1 194957396 194957723 21603 21603 D NO +NM_016851_Irf6 chr1 194979326 194998230 + chr1 194645118 194645475 333851 333851 D NO +NM_016851_Irf6 chr1 194979326 194998230 + chr1 195324443 195324741 326213 345117 U NO +NM_016851_Irf6 chr1 194979326 194998230 + chr1 195330701 195330930 332471 351375 U NO +NM_016894_Ramp1 chr1 93076419 93120251 + chr1 92070253 92070431 1005988 1005988 D NO +NM_016894_Ramp1 chr1 93076419 93120251 + chr1 91496155 91496319 1580100 1580100 D NO +NM_016894_Ramp1 chr1 93076419 93120251 + chr1 91496003 91496145 1580274 1580274 D NO +NM_016894_Ramp1 chr1 93076419 93120251 + chr1 95186508 95186637 2066257 2110089 U NO +NM_016894_Ramp1 chr1 93120257 93121772 + chr1 92070253 92070431 1049826 1049826 D NO +NM_016894_Ramp1 chr1 93120257 93121772 + chr1 91496155 91496319 1623938 1623938 D NO +NM_016894_Ramp1 chr1 93120257 93121772 + chr1 91496003 91496145 1624112 1624112 D NO +NM_016894_Ramp1 chr1 93120257 93121772 + chr1 95186508 95186637 2064736 2066251 U NO +NM_016916_Blcap chr1 46068602 46087314 - chr1 44195449 44195639 1872963 1891675 U NO +NM_016916_Blcap chr1 46068602 46087314 - chr1 40325917 40326123 5742479 5761191 U NO +NM_016916_Blcap chr1 46068602 46087314 - chr1 52625416 52625560 6538102 6538102 D NO +NM_016916_Blcap chr1 46068602 46087314 - chr1 39492140 39492513 6576089 6594801 U NO +NM_016917_Slc40a1 chr1 45964925 45999090 - chr1 44195449 44195639 1769286 1803451 U NO +NM_016917_Slc40a1 chr1 45964925 45999090 - chr1 40325917 40326123 5638802 5672967 U NO +NM_016917_Slc40a1 chr1 45964925 45999090 - chr1 39492140 39492513 6472412 6506577 U NO +NM_016917_Slc40a1 chr1 45964925 45999090 - chr1 52625416 52625560 6626326 6626326 D NO +NM_016923_Ly96 chr1 16678152 16699618 + chr1 17030405 17030545 330787 352253 U NO +NM_016923_Ly96 chr1 16678152 16699618 + chr1 13829227 13829564 2848588 2848588 D NO +NM_016923_Ly96 chr1 16678152 16699618 + chr1 10617233 10617437 6060715 6060715 D NO +NM_016923_Ly96 chr1 16678152 16699618 + chr1 9619175 9619382 7058770 7058770 D NO +NM_016928_Tlr5 chr1 184884929 184903333 + chr1 185854947 185855105 951614 970018 U NO +NM_016928_Tlr5 chr1 184884929 184903333 + chr1 182479646 182479905 2405024 2405024 D NO +NM_016928_Tlr5 chr1 184884929 184903333 + chr1 181061299 181061446 3823483 3823483 D NO +NM_016928_Tlr5 chr1 184884929 184903333 + chr1 194258648 194259032 9355315 9373719 U NO +NM_016960_Ccl20 chr1 83112527 83138624 + chr1 78630893 78631160 4481367 4481367 D NO +NM_016960_Ccl20 chr1 83112527 83138624 + chr1 88408969 88409267 5270345 5296442 U NO +NM_016960_Ccl20 chr1 83112527 83138624 + chr1 77457642 77457791 5654736 5654736 D NO +NM_016960_Ccl20 chr1 83112527 83138624 + chr1 89989553 89989714 6850929 6877026 U NO +NM_017480_Icos chr1 61034747 61057162 + chr1 63664888 63665018 2607726 2630141 U NO +NM_017480_Icos chr1 61034747 61057162 + chr1 55283572 55283675 5751072 5751072 D NO +NM_017480_Icos chr1 61034747 61057162 + chr1 54631692 54631815 6402932 6402932 D NO +NM_017480_Icos chr1 61034747 61057162 + chr1 52625416 52625560 8409187 8409187 D NO +NM_018729_Cd244 chr1 173481630 173515439 + chr1 172620917 172621080 860550 860550 D NO +NM_018729_Cd244 chr1 173481630 173515439 + chr1 172620779 172620912 860718 860718 D NO +NM_018729_Cd244 chr1 173481630 173515439 + chr1 174376470 174376659 861031 894840 U NO +NM_018729_Cd244 chr1 173481630 173515439 + chr1 170255081 170255260 3226370 3226370 D NO +NM_018750_Rassf5 chr1 133072991 133144761 - chr1 133114860 133115015 0 29746 . YES +NM_018750_Rassf5 chr1 133072991 133144761 - chr1 132950929 132951247 121744 193514 U NO +NM_018750_Rassf5 chr1 133072991 133144761 - chr1 135582677 135582828 2437916 2437916 D NO +NM_018750_Rassf5 chr1 133072991 133144761 - chr1 135851853 135852218 2707092 2707092 D NO +NM_018775_Tbc1d8 chr1 39428350 39544345 - chr1 39492140 39492513 0 51832 . YES +NM_018775_Tbc1d8 chr1 39428350 39544345 - chr1 40325917 40326123 781572 781572 D NO +NM_018775_Tbc1d8 chr1 39428350 39544345 - chr1 36106813 36107058 3321292 3437287 U NO +NM_018775_Tbc1d8 chr1 39428350 39544345 - chr1 44195449 44195639 4651104 4651104 D NO +NM_018796_Eef1b2 chr1 63221360 63227060 + chr1 63664888 63665018 437828 443528 U NO +NM_018796_Eef1b2 chr1 63221360 63227060 + chr1 55283572 55283675 7937685 7937685 D NO +NM_018796_Eef1b2 chr1 63221360 63227060 + chr1 54631692 54631815 8589545 8589545 D NO +NM_018796_Eef1b2 chr1 63221360 63227060 + chr1 72769824 72770056 9542764 9548464 U NO +NM_018817_Smarcal1 chr1 72629842 72679806 + chr1 72769824 72770056 90018 139982 U NO +NM_018817_Smarcal1 chr1 72629842 72679806 + chr1 72770058 72770226 90252 140216 U NO +NM_018817_Smarcal1 chr1 72629842 72679806 + chr1 72815517 72815742 135711 185675 U NO +NM_018817_Smarcal1 chr1 72629842 72679806 + chr1 75481920 75482054 2802114 2852078 U NO +NM_018868_Nop58 chr1 59741819 59769026 + chr1 63664888 63665018 3895862 3923069 U NO +NM_018868_Nop58 chr1 59741819 59769026 + chr1 55283572 55283675 4458144 4458144 D NO +NM_018868_Nop58 chr1 59741819 59769026 + chr1 54631692 54631815 5110004 5110004 D NO +NM_018868_Nop58 chr1 59741819 59769026 + chr1 52625416 52625560 7116259 7116259 D NO +NM_018872_Tmem131 chr1 36841788 37000491 - chr1 36106813 36107058 734730 893433 U NO +NM_018872_Tmem131 chr1 36841788 37000491 - chr1 39492140 39492513 2491649 2491649 D NO +NM_018872_Tmem131 chr1 36841788 37000491 - chr1 34206924 34207100 2634688 2793391 U NO +NM_018872_Tmem131 chr1 36841788 37000491 - chr1 40325917 40326123 3325426 3325426 D NO +NM_018881_Fmo2 chr1 164804452 164828875 - chr1 164215623 164215935 588517 612940 U NO +NM_018881_Fmo2 chr1 164804452 164828875 - chr1 163827897 163828062 976390 1000813 U NO +NM_018881_Fmo2 chr1 164804452 164828875 - chr1 167222964 167223261 2394089 2394089 D NO +NM_018881_Fmo2 chr1 164804452 164828875 - chr1 167906284 167906554 3077409 3077409 D NO +NM_019432_Tmem37 chr1 121962801 121979194 - chr1 120760212 120760461 1202340 1218733 U NO +NM_019432_Tmem37 chr1 121962801 121979194 - chr1 132950929 132951247 10971735 10971735 D NO +NM_019432_Tmem37 chr1 121962801 121979194 - chr1 133114860 133115015 11135666 11135666 D NO +NM_019432_Tmem37 chr1 121962801 121979194 - chr1 108747519 108747791 13215010 13231403 U NO +NM_019445_Fmn2 chr1 176431685 176752860 + chr1 174376470 174376659 2055026 2055026 D NO +NM_019445_Fmn2 chr1 176431685 176752860 + chr1 172620917 172621080 3810605 3810605 D NO +NM_019445_Fmn2 chr1 176431685 176752860 + chr1 172620779 172620912 3810773 3810773 D NO +NM_019445_Fmn2 chr1 176431685 176752860 + chr1 181061299 181061446 4308439 4629614 U NO +NM_019479_Hes6 chr1 93308097 93310595 - chr1 92070253 92070431 1237666 1240164 U NO +NM_019479_Hes6 chr1 93308097 93310595 - chr1 91496155 91496319 1811778 1814276 U NO +NM_019479_Hes6 chr1 93308097 93310595 - chr1 91496003 91496145 1811952 1814450 U NO +NM_019479_Hes6 chr1 93308097 93310595 - chr1 95186508 95186637 1875913 1875913 D NO +NM_019484_Refbp2 chr1 173433397 173434881 + chr1 172620917 172621080 812317 812317 D NO +NM_019484_Refbp2 chr1 173433397 173434881 + chr1 172620779 172620912 812485 812485 D NO +NM_019484_Refbp2 chr1 173433397 173434881 + chr1 174376470 174376659 941589 943073 U NO +NM_019484_Refbp2 chr1 173433397 173434881 + chr1 170255081 170255260 3178137 3178137 D NO +NM_019562_Uchl5 chr1 145623774 145654586 + chr1 145591041 145591176 32598 32598 D NO +NM_019562_Uchl5 chr1 145623774 145654586 + chr1 140381656 140381785 5241989 5241989 D NO +NM_019562_Uchl5 chr1 145623774 145654586 + chr1 138437726 138437860 7185914 7185914 D NO +NM_019562_Uchl5 chr1 145623774 145654586 + chr1 136956468 136956598 8667176 8667176 D NO +NM_019570_Rev1 chr1 38109638 38186507 - chr1 39492140 39492513 1305633 1305633 D NO +NM_019570_Rev1 chr1 38109638 38186507 - chr1 36106813 36107058 2002580 2079449 U NO +NM_019570_Rev1 chr1 38109638 38186507 - chr1 40325917 40326123 2139410 2139410 D NO +NM_019570_Rev1 chr1 38109638 38186507 - chr1 34206924 34207100 3902538 3979407 U NO +NM_019645_Pkp1 chr1 137767972 137815881 - chr1 138437726 138437860 621845 621845 D NO +NM_019645_Pkp1 chr1 137767972 137815881 - chr1 136956468 136956598 811374 859283 U NO +NM_019645_Pkp1 chr1 137767972 137815881 - chr1 135851853 135852218 1915754 1963663 U NO +NM_019645_Pkp1 chr1 137767972 137815881 - chr1 135582677 135582828 2185144 2233053 U NO +NM_019685_Ruvbl1 chr1 141824644 141826247 - chr1 140381656 140381785 1442859 1444462 U NO +NM_019685_Ruvbl1 chr1 141824644 141826247 - chr1 138437726 138437860 3386784 3388387 U NO +NM_019685_Ruvbl1 chr1 141824644 141826247 - chr1 145591041 145591176 3764794 3764794 D NO +NM_019685_Ruvbl1 chr1 141824644 141826247 - chr1 136956468 136956598 4868046 4869649 U NO +NM_019759_Dpt chr1 166726785 166754377 + chr1 167222964 167223261 468587 496179 U NO +NM_019759_Dpt chr1 166726785 166754377 + chr1 167906284 167906554 1151907 1179499 U NO +NM_019759_Dpt chr1 166726785 166754377 + chr1 164215623 164215935 2510850 2510850 D NO +NM_019759_Dpt chr1 166726785 166754377 + chr1 163827897 163828062 2898723 2898723 D NO +NM_019777_Ikbke chr1 133151052 133176163 - chr1 133114860 133115015 36037 61148 U NO +NM_019777_Ikbke chr1 133151052 133176163 - chr1 132950929 132951247 199805 224916 U NO +NM_019777_Ikbke chr1 133151052 133176163 - chr1 135582677 135582828 2406514 2406514 D NO +NM_019777_Ikbke chr1 133151052 133176163 - chr1 135851853 135852218 2675690 2675690 D NO +NM_019790_Tmeff2 chr1 50957501 51282275 + chr1 52625416 52625560 1343141 1667915 U NO +NM_019790_Tmeff2 chr1 50957501 51282275 + chr1 54631692 54631815 3349417 3674191 U NO +NM_019790_Tmeff2 chr1 50957501 51282275 + chr1 55283572 55283675 4001297 4326071 U NO +NM_019790_Tmeff2 chr1 50957501 51282275 + chr1 44195449 44195639 6761862 6761862 D NO +NM_019933_Ptpn4 chr1 121556050 121771541 - chr1 120760212 120760461 795589 1011080 U NO +NM_019933_Ptpn4 chr1 121556050 121771541 - chr1 132950929 132951247 11179388 11179388 D NO +NM_019933_Ptpn4 chr1 121556050 121771541 - chr1 133114860 133115015 11343319 11343319 D NO +NM_019933_Ptpn4 chr1 121556050 121771541 - chr1 108747519 108747791 12808259 13023750 U NO +NM_019993_Aldh9a1 chr1 169280142 169298663 + chr1 170255081 170255260 956418 974939 U NO +NM_019993_Aldh9a1 chr1 169280142 169298663 + chr1 167906284 167906554 1373588 1373588 D NO +NM_019993_Aldh9a1 chr1 169280142 169298663 + chr1 167222964 167223261 2056881 2056881 D NO +NM_019993_Aldh9a1 chr1 169280142 169298663 + chr1 172620779 172620912 3322116 3340637 U NO +NM_020025_B3galt2 chr1 145487786 145497516 + chr1 145591041 145591176 93525 103255 U NO +NM_020025_B3galt2 chr1 145487786 145497516 + chr1 140381656 140381785 5106001 5106001 D NO +NM_020025_B3galt2 chr1 145487786 145497516 + chr1 138437726 138437860 7049926 7049926 D NO +NM_020025_B3galt2 chr1 145487786 145497516 + chr1 136956468 136956598 8531188 8531188 D NO +NM_020579_B4galt3 chr1 173199650 173207025 + chr1 172620917 172621080 578570 578570 D NO +NM_020579_B4galt3 chr1 173199650 173207025 + chr1 172620779 172620912 578738 578738 D NO +NM_020579_B4galt3 chr1 173199650 173207025 + chr1 174376470 174376659 1169445 1176820 U NO +NM_020579_B4galt3 chr1 173199650 173207025 + chr1 170255081 170255260 2944390 2944390 D NO +NM_020588_Tmem183a chr1 136242675 136258707 - chr1 135851853 135852218 390457 406489 U NO +NM_020588_Tmem183a chr1 136242675 136258707 - chr1 135582677 135582828 659847 675879 U NO +NM_020588_Tmem183a chr1 136242675 136258707 - chr1 136956468 136956598 697761 697761 D NO +NM_020588_Tmem183a chr1 136242675 136258707 - chr1 138437726 138437860 2179019 2179019 D NO +NM_020604_Jph1 chr1 16837549 17087942 - chr1 17030405 17030545 0 57397 . YES +NM_020604_Jph1 chr1 16837549 17087942 - chr1 13829227 13829564 3007985 3258378 U NO +NM_020604_Jph1 chr1 16837549 17087942 - chr1 10617233 10617437 6220112 6470505 U NO +NM_020604_Jph1 chr1 16837549 17087942 - chr1 9619175 9619382 7218167 7468560 U NO +NM_021285_Myl1 chr1 66948125 66992032 - chr1 63664888 63665018 3283107 3327014 U NO +NM_021285_Myl1 chr1 66948125 66992032 - chr1 72769824 72770056 5777792 5777792 D NO +NM_021285_Myl1 chr1 66948125 66992032 - chr1 72770058 72770226 5778026 5778026 D NO +NM_021285_Myl1 chr1 66948125 66992032 - chr1 72815517 72815742 5823485 5823485 D NO +NM_021295_Lancl1 chr1 67004053 67085447 - chr1 63664888 63665018 3339035 3420429 U NO +NM_021295_Lancl1 chr1 67004053 67085447 - chr1 72769824 72770056 5684377 5684377 D NO +NM_021295_Lancl1 chr1 67004053 67085447 - chr1 72770058 72770226 5684611 5684611 D NO +NM_021295_Lancl1 chr1 67004053 67085447 - chr1 72815517 72815742 5730070 5730070 D NO +NM_021306_Ecel1 chr1 89039384 89053076 - chr1 88408969 88409267 630117 643809 U NO +NM_021306_Ecel1 chr1 89039384 89053076 - chr1 89989553 89989714 936477 936477 D NO +NM_021306_Ecel1 chr1 89039384 89053076 - chr1 90412932 90413132 1359856 1359856 D NO +NM_021306_Ecel1 chr1 89039384 89053076 - chr1 90592499 90592629 1539423 1539423 D NO +NM_021312_Wdr12 chr1 60099363 60155552 - chr1 63664888 63665018 3509336 3509336 D NO +NM_021312_Wdr12 chr1 60099363 60155552 - chr1 55283572 55283675 4815688 4871877 U NO +NM_021312_Wdr12 chr1 60099363 60155552 - chr1 54631692 54631815 5467548 5523737 U NO +NM_021312_Wdr12 chr1 60099363 60155552 - chr1 52625416 52625560 7473803 7529992 U NO +NM_021313_Rnf25 chr1 74640329 74648026 - chr1 75481920 75482054 833894 833894 D NO +NM_021313_Rnf25 chr1 74640329 74648026 - chr1 72815517 72815742 1824587 1832284 U NO +NM_021313_Rnf25 chr1 74640329 74648026 - chr1 72770058 72770226 1870103 1877800 U NO +NM_021313_Rnf25 chr1 74640329 74648026 - chr1 72769824 72770056 1870273 1877970 U NO +NM_021342_Kcne4 chr1 78791793 78816579 + chr1 78630893 78631160 160633 160633 D NO +NM_021342_Kcne4 chr1 78791793 78816579 + chr1 77457642 77457791 1334002 1334002 D NO +NM_021342_Kcne4 chr1 78791793 78816579 + chr1 75481920 75482054 3309739 3309739 D NO +NM_021342_Kcne4 chr1 78791793 78816579 + chr1 72815517 72815742 5976051 5976051 D NO +NM_021350_Chml chr1 177615948 177618649 - chr1 174376470 174376659 3239289 3241990 U NO +NM_021350_Chml chr1 177615948 177618649 - chr1 181061299 181061446 3442650 3442650 D NO +NM_021350_Chml chr1 177615948 177618649 - chr1 182479646 182479905 4860997 4860997 D NO +NM_021350_Chml chr1 177615948 177618649 - chr1 172620917 172621080 4994868 4997569 U NO +NM_021374_Rgs20 chr1 4899617 5060346 - chr1 9619046 9619167 4558700 4558700 D NO +NM_021374_Rgs20 chr1 4899617 5060346 - chr1 9619175 9619382 4558829 4558829 D NO +NM_021374_Rgs20 chr1 4899617 5060346 - chr1 10617233 10617437 5556887 5556887 D NO +NM_021374_Rgs20 chr1 4899617 5060346 - chr1 13829227 13829564 8768881 8768881 D NO +NM_021380_Il20 chr1 132803344 132808275 - chr1 132950929 132951247 142654 142654 D NO +NM_021380_Il20 chr1 132803344 132808275 - chr1 133114860 133115015 306585 306585 D NO +NM_021380_Il20 chr1 132803344 132808275 - chr1 135582677 135582828 2774402 2774402 D NO +NM_021380_Il20 chr1 132803344 132808275 - chr1 135851853 135852218 3043578 3043578 D NO +NM_021383_Rqcd1 chr1 74542393 74577404 + chr1 75481920 75482054 904516 939527 U NO +NM_021383_Rqcd1 chr1 74542393 74577404 + chr1 72815517 72815742 1726651 1726651 D NO +NM_021383_Rqcd1 chr1 74542393 74577404 + chr1 72770058 72770226 1772167 1772167 D NO +NM_021383_Rqcd1 chr1 74542393 74577404 + chr1 72769824 72770056 1772337 1772337 D NO +NM_021400_Prg4 chr1 152296956 152333784 - chr1 154971572 154971673 2637788 2637788 D NO +NM_021400_Prg4 chr1 152296956 152333784 - chr1 155123313 155123435 2789529 2789529 D NO +NM_021400_Prg4 chr1 152296956 152333784 - chr1 158510523 158510813 6176739 6176739 D NO +NM_021400_Prg4 chr1 152296956 152333784 - chr1 158537267 158537411 6203483 6203483 D NO +NM_021408_Ush2a chr1 190085902 190292167 + chr1 194258648 194259032 3966481 4172746 U NO +NM_021408_Ush2a chr1 190085902 190292167 + chr1 185854947 185855105 4230797 4230797 D NO +NM_021408_Ush2a chr1 190085902 190292167 + chr1 194645118 194645475 4352951 4559216 U NO +NM_021408_Ush2a chr1 190085902 190292167 + chr1 194957396 194957723 4665229 4871494 U NO +NM_021421_Angel2 chr1 192748297 192770827 + chr1 194258648 194259032 1487821 1510351 U NO +NM_021421_Angel2 chr1 192748297 192770827 + chr1 194645118 194645475 1874291 1896821 U NO +NM_021421_Angel2 chr1 192748297 192770827 + chr1 194957396 194957723 2186569 2209099 U NO +NM_021421_Angel2 chr1 192748297 192770827 + chr1 195324443 195324741 2553616 2576146 U NO +NM_021433_Stx6 chr1 157005819 157054716 + chr1 158510523 158510813 1455807 1504704 U NO +NM_021433_Stx6 chr1 157005819 157054716 + chr1 158537267 158537411 1482551 1531448 U NO +NM_021433_Stx6 chr1 157005819 157054716 + chr1 158580638 158580759 1525922 1574819 U NO +NM_021433_Stx6 chr1 157005819 157054716 + chr1 158835251 158835391 1780535 1829432 U NO +NM_021467_Tnni1 chr1 137676021 137713725 + chr1 136956468 136956598 719423 719423 D NO +NM_021467_Tnni1 chr1 137676021 137713725 + chr1 138437726 138437860 724001 761705 U NO +NM_021467_Tnni1 chr1 137676021 137713725 + chr1 135851853 135852218 1823803 1823803 D NO +NM_021467_Tnni1 chr1 137676021 137713725 + chr1 135582677 135582828 2093193 2093193 D NO +NM_021511_Rrs1 chr1 9535513 9537532 + chr1 9619046 9619167 81514 83533 U NO +NM_021511_Rrs1 chr1 9535513 9537532 + chr1 9619175 9619382 81643 83662 U NO +NM_021511_Rrs1 chr1 9535513 9537532 + chr1 10617233 10617437 1079701 1081720 U NO +NM_021511_Rrs1 chr1 9535513 9537532 + chr1 13829227 13829564 4291695 4293714 U NO +NM_021537_Stk25 chr1 95517348 95555233 - chr1 95186508 95186637 330711 368596 U NO +NM_021537_Stk25 chr1 95517348 95555233 - chr1 92070253 92070431 3446917 3484802 U NO +NM_021537_Stk25 chr1 95517348 95555233 - chr1 91496155 91496319 4021029 4058914 U NO +NM_021537_Stk25 chr1 95517348 95555233 - chr1 91496003 91496145 4021203 4059088 U NO +NM_021541_Cryba2 chr1 74936508 74939802 - chr1 75481920 75482054 542118 542118 D NO +NM_021541_Cryba2 chr1 74936508 74939802 - chr1 72815517 72815742 2120766 2124060 U NO +NM_021541_Cryba2 chr1 74936508 74939802 - chr1 72770058 72770226 2166282 2169576 U NO +NM_021541_Cryba2 chr1 74936508 74939802 - chr1 72769824 72770056 2166452 2169746 U NO +NM_021600_Chrnd chr1 89087192 89096645 + chr1 88408969 88409267 677925 677925 D NO +NM_021600_Chrnd chr1 89087192 89096645 + chr1 89989553 89989714 892908 902361 U NO +NM_021600_Chrnd chr1 89087192 89096645 + chr1 90412932 90413132 1316287 1325740 U NO +NM_021600_Chrnd chr1 89087192 89096645 + chr1 90592499 90592629 1495854 1505307 U NO +NM_021605_Nek7 chr1 140379472 140516775 - chr1 140381656 140381785 0 134990 . YES +NM_021605_Nek7 chr1 140379472 140516775 - chr1 138437726 138437860 1941612 2078915 U NO +NM_021605_Nek7 chr1 140379472 140516775 - chr1 136956468 136956598 3422874 3560177 U NO +NM_021605_Nek7 chr1 140379472 140516775 - chr1 135851853 135852218 4527254 4664557 U NO +NM_021607_Ncstn chr1 173996154 174012927 - chr1 174376470 174376659 363543 363543 D NO +NM_021607_Ncstn chr1 173996154 174012927 - chr1 172620917 172621080 1375074 1391847 U NO +NM_021607_Ncstn chr1 173996154 174012927 - chr1 172620779 172620912 1375242 1392015 U NO +NM_021607_Ncstn chr1 173996154 174012927 - chr1 170255081 170255260 3740894 3757667 U NO +NM_021610_Gpa33 chr1 168060559 168118074 + chr1 167906284 167906554 154005 154005 D NO +NM_021610_Gpa33 chr1 168060559 168118074 + chr1 167222964 167223261 837298 837298 D NO +NM_021610_Gpa33 chr1 168060559 168118074 + chr1 170255081 170255260 2137007 2194522 U NO +NM_021610_Gpa33 chr1 168060559 168118074 + chr1 164215623 164215935 3844624 3844624 D NO +NM_022018_Fam129a chr1 153370940 153589282 + chr1 154971572 154971673 1382290 1600632 U NO +NM_022018_Fam129a chr1 153370940 153589282 + chr1 155123313 155123435 1534031 1752373 U NO +NM_022018_Fam129a chr1 153370940 153589282 + chr1 158510523 158510813 4921241 5139583 U NO +NM_022018_Fam129a chr1 153370940 153589282 + chr1 158537267 158537411 4947985 5166327 U NO +NM_022019_Dusp10 chr1 185755009 185899515 + chr1 185854947 185855105 0 99938 . YES +NM_022019_Dusp10 chr1 185755009 185899515 + chr1 182479646 182479905 3275104 3275104 D NO +NM_022019_Dusp10 chr1 185755009 185899515 + chr1 181061299 181061446 4693563 4693563 D NO +NM_022019_Dusp10 chr1 185755009 185899515 + chr1 194258648 194259032 8359133 8503639 U NO +NM_022312_Tnr chr1 161327058 161857057 + chr1 159240736 159240866 2086192 2086192 D NO +NM_022312_Tnr chr1 161327058 161857057 + chr1 158835251 158835391 2491667 2491667 D NO +NM_022312_Tnr chr1 161327058 161857057 + chr1 163827897 163828062 1970840 2500839 U NO +NM_022312_Tnr chr1 161327058 161857057 + chr1 158580638 158580759 2746299 2746299 D NO +NM_022320_Gpr35 chr1 94683531 94882968 + chr1 95186508 95186637 303540 502977 U NO +NM_022320_Gpr35 chr1 94683531 94882968 + chr1 92070253 92070431 2613100 2613100 D NO +NM_022320_Gpr35 chr1 94683531 94882968 + chr1 91496155 91496319 3187212 3187212 D NO +NM_022320_Gpr35 chr1 94683531 94882968 + chr1 91496003 91496145 3187386 3187386 D NO +NM_022327_Ralb chr1 121363651 121401351 - chr1 120760212 120760461 603190 640890 U NO +NM_022327_Ralb chr1 121363651 121401351 - chr1 132950929 132951247 11549578 11549578 D NO +NM_022327_Ralb chr1 121363651 121401351 - chr1 133114860 133115015 11713509 11713509 D NO +NM_022327_Ralb chr1 121363651 121401351 - chr1 108747519 108747791 12615860 12653560 U NO +NM_022329_Ifrg15 chr1 157883344 157900866 + chr1 158510523 158510813 609657 627179 U NO +NM_022329_Ifrg15 chr1 157883344 157900866 + chr1 158537267 158537411 636401 653923 U NO +NM_022329_Ifrg15 chr1 157883344 157900866 + chr1 158580638 158580759 679772 697294 U NO +NM_022329_Ifrg15 chr1 157883344 157900866 + chr1 158835251 158835391 934385 951907 U NO +NM_022417_Itm2c chr1 87780787 87838221 + chr1 88408969 88409267 570748 628182 U NO +NM_022417_Itm2c chr1 87780787 87838221 + chr1 89989553 89989714 2151332 2208766 U NO +NM_022417_Itm2c chr1 87780787 87838221 + chr1 90412932 90413132 2574711 2632145 U NO +NM_022417_Itm2c chr1 87780787 87838221 + chr1 90592499 90592629 2754278 2811712 U NO +NM_022563_Ddr2 chr1 171907607 172040752 - chr1 172620779 172620912 580027 580027 D NO +NM_022563_Ddr2 chr1 171907607 172040752 - chr1 172620917 172621080 580165 580165 D NO +NM_022563_Ddr2 chr1 171907607 172040752 - chr1 170255081 170255260 1652347 1785492 U NO +NM_022563_Ddr2 chr1 171907607 172040752 - chr1 174376470 174376659 2335718 2335718 D NO +NM_022721_Fzd5 chr1 64777130 64826549 - chr1 63664888 63665018 1112112 1161531 U NO +NM_022721_Fzd5 chr1 64777130 64826549 - chr1 72769824 72770056 7943275 7943275 D NO +NM_022721_Fzd5 chr1 64777130 64826549 - chr1 72770058 72770226 7943509 7943509 D NO +NM_022721_Fzd5 chr1 64777130 64826549 - chr1 72815517 72815742 7988968 7988968 D NO +NM_022881_Rgs18 chr1 146599793 146755382 - chr1 145591041 145591176 1008617 1164206 U NO +NM_022881_Rgs18 chr1 146599793 146755382 - chr1 140381656 140381785 6218008 6373597 U NO +NM_022881_Rgs18 chr1 146599793 146755382 - chr1 154971572 154971673 8216190 8216190 D NO +NM_022881_Rgs18 chr1 146599793 146755382 - chr1 138437726 138437860 8161933 8317522 U NO +NM_022988_Nif3l1 chr1 58501750 58538650 + chr1 55283572 55283675 3218075 3218075 D NO +NM_022988_Nif3l1 chr1 58501750 58538650 + chr1 54631692 54631815 3869935 3869935 D NO +NM_022988_Nif3l1 chr1 58501750 58538650 + chr1 63664888 63665018 5126238 5163138 U NO +NM_022988_Nif3l1 chr1 58501750 58538650 + chr1 52625416 52625560 5876190 5876190 D NO +NM_023041_Pex19 chr1 174056859 174067189 + chr1 174376470 174376659 309281 319611 U NO +NM_023041_Pex19 chr1 174056859 174067189 + chr1 172620917 172621080 1435779 1435779 D NO +NM_023041_Pex19 chr1 174056859 174067189 + chr1 172620779 172620912 1435947 1435947 D NO +NM_023041_Pex19 chr1 174056859 174067189 + chr1 170255081 170255260 3801599 3801599 D NO +NM_023141_Tor3a chr1 158583760 158604477 - chr1 158580638 158580759 3001 23718 U NO +NM_023141_Tor3a chr1 158583760 158604477 - chr1 158537267 158537411 46349 67066 U NO +NM_023141_Tor3a chr1 158583760 158604477 - chr1 158510523 158510813 72947 93664 U NO +NM_023141_Tor3a chr1 158583760 158604477 - chr1 158835251 158835391 230774 230774 D NO +NM_023173_Dusp12 chr1 172803629 172815650 - chr1 172620917 172621080 182549 194570 U NO +NM_023173_Dusp12 chr1 172803629 172815650 - chr1 172620779 172620912 182717 194738 U NO +NM_023173_Dusp12 chr1 172803629 172815650 - chr1 174376470 174376659 1560820 1560820 D NO +NM_023173_Dusp12 chr1 172803629 172815650 - chr1 170255081 170255260 2548369 2560390 U NO +NM_023200_Ppp1r7 chr1 95239431 95266345 + chr1 95186508 95186637 52794 52794 D NO +NM_023200_Ppp1r7 chr1 95239431 95266345 + chr1 92070253 92070431 3169000 3169000 D NO +NM_023200_Ppp1r7 chr1 95239431 95266345 + chr1 91496155 91496319 3743112 3743112 D NO +NM_023200_Ppp1r7 chr1 95239431 95266345 + chr1 91496003 91496145 3743286 3743286 D NO +NM_023284_Nuf2 chr1 171386224 171461676 - chr1 172620779 172620912 1159103 1159103 D NO +NM_023284_Nuf2 chr1 171386224 171461676 - chr1 172620917 172621080 1159241 1159241 D NO +NM_023284_Nuf2 chr1 171386224 171461676 - chr1 170255081 170255260 1130964 1206416 U NO +NM_023284_Nuf2 chr1 171386224 171461676 - chr1 174376470 174376659 2914794 2914794 D NO +NM_023314_Eif4e2 chr1 89110486 89145136 + chr1 88408969 88409267 701219 701219 D NO +NM_023314_Eif4e2 chr1 89110486 89145136 + chr1 89989553 89989714 844417 879067 U NO +NM_023314_Eif4e2 chr1 89110486 89145136 + chr1 90412932 90413132 1267796 1302446 U NO +NM_023314_Eif4e2 chr1 89110486 89145136 + chr1 90592499 90592629 1447363 1482013 U NO +NM_023341_Cabc1 chr1 182095369 182129713 - chr1 182479646 182479905 349933 349933 D NO +NM_023341_Cabc1 chr1 182095369 182129713 - chr1 181061299 181061446 1033923 1068267 U NO +NM_023341_Cabc1 chr1 182095369 182129713 - chr1 185854947 185855105 3725234 3725234 D NO +NM_023341_Cabc1 chr1 182095369 182129713 - chr1 174376470 174376659 7718710 7753054 U NO +NM_023343_Ilkap chr1 93270445 93290447 - chr1 92070253 92070431 1200014 1220016 U NO +NM_023343_Ilkap chr1 93270445 93290447 - chr1 91496155 91496319 1774126 1794128 U NO +NM_023343_Ilkap chr1 93270445 93290447 - chr1 91496003 91496145 1774300 1794302 U NO +NM_023343_Ilkap chr1 93270445 93290447 - chr1 95186508 95186637 1896061 1896061 D NO +NM_023434_Tox4 chr1 16757104 16760219 - chr1 17030405 17030545 270186 270186 D NO +NM_023434_Tox4 chr1 16757104 16760219 - chr1 13829227 13829564 2927540 2930655 U NO +NM_023434_Tox4 chr1 16757104 16760219 - chr1 10617233 10617437 6139667 6142782 U NO +NM_023434_Tox4 chr1 16757104 16760219 - chr1 9619175 9619382 7137722 7140837 U NO +NM_023514_Mrps9 chr1 42760822 42962528 + chr1 44195449 44195639 1232921 1434627 U NO +NM_023514_Mrps9 chr1 42760822 42962528 + chr1 40325917 40326123 2434699 2434699 D NO +NM_023514_Mrps9 chr1 42760822 42962528 + chr1 39492140 39492513 3268309 3268309 D NO +NM_023514_Mrps9 chr1 42760822 42962528 + chr1 36106813 36107058 6653764 6653764 D NO +NM_023523_Pecr chr1 72281105 72330878 - chr1 72769824 72770056 438946 438946 D NO +NM_023523_Pecr chr1 72281105 72330878 - chr1 72770058 72770226 439180 439180 D NO +NM_023523_Pecr chr1 72281105 72330878 - chr1 72815517 72815742 484639 484639 D NO +NM_023523_Pecr chr1 72281105 72330878 - chr1 75481920 75482054 3151042 3151042 D NO +NM_023617_Aox3 chr1 58169980 58259027 + chr1 55283572 55283675 2886305 2886305 D NO +NM_023617_Aox3 chr1 58169980 58259027 + chr1 54631692 54631815 3538165 3538165 D NO +NM_023617_Aox3 chr1 58169980 58259027 + chr1 63664888 63665018 5405861 5494908 U NO +NM_023617_Aox3 chr1 58169980 58259027 + chr1 52625416 52625560 5544420 5544420 D NO +NM_023631_Aox4 chr1 58267261 58325441 + chr1 55283572 55283675 2983586 2983586 D NO +NM_023631_Aox4 chr1 58267261 58325441 + chr1 54631692 54631815 3635446 3635446 D NO +NM_023631_Aox4 chr1 58267261 58325441 + chr1 63664888 63665018 5339447 5397627 U NO +NM_023631_Aox4 chr1 58267261 58325441 + chr1 52625416 52625560 5641701 5641701 D NO +NM_023645_Kdelc1 chr1 44143458 44177102 - chr1 44195449 44195639 18347 18347 D NO +NM_023645_Kdelc1 chr1 44143458 44177102 - chr1 40325917 40326123 3817335 3850979 U NO +NM_023645_Kdelc1 chr1 44143458 44177102 - chr1 39492140 39492513 4650945 4684589 U NO +NM_023645_Kdelc1 chr1 44143458 44177102 - chr1 36106813 36107058 8036400 8070044 U NO +NM_023727_Rd3 chr1 193784705 193812153 + chr1 194258648 194259032 446495 473943 U NO +NM_023727_Rd3 chr1 193784705 193812153 + chr1 194645118 194645475 832965 860413 U NO +NM_023727_Rd3 chr1 193784705 193812153 + chr1 194957396 194957723 1145243 1172691 U NO +NM_023727_Rd3 chr1 193784705 193812153 + chr1 195324443 195324741 1512290 1539738 U NO +NM_023732_Abcb6 chr1 75168223 75177000 - chr1 75481920 75482054 304920 304920 D NO +NM_023732_Abcb6 chr1 75168223 75177000 - chr1 77457642 77457791 2280642 2280642 D NO +NM_023732_Abcb6 chr1 75168223 75177000 - chr1 72815517 72815742 2352481 2361258 U NO +NM_023732_Abcb6 chr1 75168223 75177000 - chr1 72770058 72770226 2397997 2406774 U NO +NM_023755_Tcfcp2l1 chr1 120524515 120655075 + chr1 120760212 120760461 105137 235697 U NO +NM_023755_Tcfcp2l1 chr1 120524515 120655075 + chr1 108747519 108747791 11776724 11776724 D NO +NM_023755_Tcfcp2l1 chr1 120524515 120655075 + chr1 132950929 132951247 12295854 12426414 U NO +NM_023755_Tcfcp2l1 chr1 120524515 120655075 + chr1 133114860 133115015 12459785 12590345 U NO +NM_023884_Ralgps2 chr1 158734300 158969600 - chr1 158835251 158835391 0 134209 . YES +NM_023884_Ralgps2 chr1 158734300 158969600 - chr1 159240736 159240866 271136 271136 D NO +NM_023884_Ralgps2 chr1 158734300 158969600 - chr1 158580638 158580759 153541 388841 U NO +NM_023884_Ralgps2 chr1 158734300 158969600 - chr1 158537267 158537411 196889 432189 U NO +NM_024197_Ndufa10 chr1 94121208 94393553 - chr1 95186508 95186637 792955 792955 D NO +NM_024197_Ndufa10 chr1 94121208 94393553 - chr1 92070253 92070431 2050777 2323122 U NO +NM_024197_Ndufa10 chr1 94121208 94393553 - chr1 91496155 91496319 2624889 2897234 U NO +NM_024197_Ndufa10 chr1 94121208 94393553 - chr1 91496003 91496145 2625063 2897408 U NO +NM_024264_Cyp27a1 chr1 74759770 74786412 + chr1 75481920 75482054 695508 722150 U NO +NM_024264_Cyp27a1 chr1 74759770 74786412 + chr1 72815517 72815742 1944028 1944028 D NO +NM_024264_Cyp27a1 chr1 74759770 74786412 + chr1 72770058 72770226 1989544 1989544 D NO +NM_024264_Cyp27a1 chr1 74759770 74786412 + chr1 72769824 72770056 1989714 1989714 D NO +NM_024282_Pppde1 chr1 180117558 180197483 + chr1 181061299 181061446 863816 943741 U NO +NM_024282_Pppde1 chr1 180117558 180197483 + chr1 182479646 182479905 2282163 2362088 U NO +NM_024282_Pppde1 chr1 180117558 180197483 + chr1 185854947 185855105 5657464 5737389 U NO +NM_024282_Pppde1 chr1 180117558 180197483 + chr1 174376470 174376659 5740899 5740899 D NO +NM_024283_1500015O10Rik chr1 43787414 43799399 + chr1 44195449 44195639 396050 408035 U NO +NM_024283_1500015O10Rik chr1 43787414 43799399 + chr1 40325917 40326123 3461291 3461291 D NO +NM_024283_1500015O10Rik chr1 43787414 43799399 + chr1 39492140 39492513 4294901 4294901 D NO +NM_024283_1500015O10Rik chr1 43787414 43799399 + chr1 36106813 36107058 7680356 7680356 D NO +NM_025283_Mobkl3 chr1 55187734 55211736 + chr1 55283572 55283675 71836 95838 U NO +NM_025283_Mobkl3 chr1 55187734 55211736 + chr1 54631692 54631815 555919 555919 D NO +NM_025283_Mobkl3 chr1 55187734 55211736 + chr1 52625416 52625560 2562174 2562174 D NO +NM_025283_Mobkl3 chr1 55187734 55211736 + chr1 63664888 63665018 8453152 8477154 U NO +NM_025300_Mrpl15 chr1 4763290 4798011 - chr1 9619046 9619167 4821035 4821035 D NO +NM_025300_Mrpl15 chr1 4763290 4798011 - chr1 9619175 9619382 4821164 4821164 D NO +NM_025300_Mrpl15 chr1 4763290 4798011 - chr1 10617233 10617437 5819222 5819222 D NO +NM_025300_Mrpl15 chr1 4763290 4798011 - chr1 13829227 13829564 9031216 9031216 D NO +NM_025303_Stau2 chr1 16218775 16510193 - chr1 17030405 17030545 520212 520212 D NO +NM_025303_Stau2 chr1 16218775 16510193 - chr1 13829227 13829564 2389211 2680629 U NO +NM_025303_Stau2 chr1 16218775 16510193 - chr1 10617233 10617437 5601338 5892756 U NO +NM_025303_Stau2 chr1 16218775 16510193 - chr1 9619175 9619382 6599393 6890811 U NO +NM_025321_Sdhc chr1 173057297 173080736 - chr1 172620917 172621080 436217 459656 U NO +NM_025321_Sdhc chr1 173057297 173080736 - chr1 172620779 172620912 436385 459824 U NO +NM_025321_Sdhc chr1 173057297 173080736 - chr1 174376470 174376659 1295734 1295734 D NO +NM_025321_Sdhc chr1 173057297 173080736 - chr1 170255081 170255260 2802037 2825476 U NO +NM_025386_Fbxo36 chr1 84835492 84897059 + chr1 88408969 88409267 3511910 3573477 U NO +NM_025386_Fbxo36 chr1 84835492 84897059 + chr1 89989553 89989714 5092494 5154061 U NO +NM_025386_Fbxo36 chr1 84835492 84897059 + chr1 90412932 90413132 5515873 5577440 U NO +NM_025386_Fbxo36 chr1 84835492 84897059 + chr1 90592499 90592629 5695440 5757007 U NO +NM_025388_Ufc1 chr1 173218698 173225135 - chr1 172620917 172621080 597618 604055 U NO +NM_025388_Ufc1 chr1 173218698 173225135 - chr1 172620779 172620912 597786 604223 U NO +NM_025388_Ufc1 chr1 173218698 173225135 - chr1 174376470 174376659 1151335 1151335 D NO +NM_025388_Ufc1 chr1 173218698 173225135 - chr1 170255081 170255260 2963438 2969875 U NO +NM_025424_Nenf chr1 193130454 193141997 - chr1 194258648 194259032 1116651 1116651 D NO +NM_025424_Nenf chr1 193130454 193141997 - chr1 194645118 194645475 1503121 1503121 D NO +NM_025424_Nenf chr1 193130454 193141997 - chr1 194957396 194957723 1815399 1815399 D NO +NM_025424_Nenf chr1 193130454 193141997 - chr1 195324443 195324741 2182446 2182446 D NO +NM_025439_Tmem9 chr1 137879942 137931919 + chr1 138437726 138437860 505807 557784 U NO +NM_025439_Tmem9 chr1 137879942 137931919 + chr1 136956468 136956598 923344 923344 D NO +NM_025439_Tmem9 chr1 137879942 137931919 + chr1 135851853 135852218 2027724 2027724 D NO +NM_025439_Tmem9 chr1 137879942 137931919 + chr1 135582677 135582828 2297114 2297114 D NO +NM_025453_Tm4sf20 chr1 82749860 82765031 - chr1 78630893 78631160 4118700 4133871 U NO +NM_025453_Tm4sf20 chr1 82749860 82765031 - chr1 77457642 77457791 5292069 5307240 U NO +NM_025453_Tm4sf20 chr1 82749860 82765031 - chr1 88408969 88409267 5643938 5643938 D NO +NM_025453_Tm4sf20 chr1 82749860 82765031 - chr1 89989553 89989714 7224522 7224522 D NO +NM_025454_Ing5 chr1 95700534 95719794 + chr1 95186508 95186637 513897 513897 D NO +NM_025454_Ing5 chr1 95700534 95719794 + chr1 92070253 92070431 3630103 3630103 D NO +NM_025454_Ing5 chr1 95700534 95719794 + chr1 91496155 91496319 4204215 4204215 D NO +NM_025454_Ing5 chr1 95700534 95719794 + chr1 91496003 91496145 4204389 4204389 D NO +NM_025470_1810030J14Rik chr1 176260650 176349219 + chr1 174376470 174376659 1883991 1883991 D NO +NM_025470_1810030J14Rik chr1 176260650 176349219 + chr1 172620917 172621080 3639570 3639570 D NO +NM_025470_1810030J14Rik chr1 176260650 176349219 + chr1 172620779 172620912 3639738 3639738 D NO +NM_025470_1810030J14Rik chr1 176260650 176349219 + chr1 181061299 181061446 4712080 4800649 U NO +NM_025474_Mrps14 chr1 162082365 162131317 + chr1 163827897 163828062 1696580 1745532 U NO +NM_025474_Mrps14 chr1 162082365 162131317 + chr1 164215623 164215935 2084306 2133258 U NO +NM_025474_Mrps14 chr1 162082365 162131317 + chr1 159240736 159240866 2841499 2841499 D NO +NM_025474_Mrps14 chr1 162082365 162131317 + chr1 158835251 158835391 3246974 3246974 D NO +NM_025505_Blzf1 chr1 166219931 166237615 - chr1 167222964 167223261 985349 985349 D NO +NM_025505_Blzf1 chr1 166219931 166237615 - chr1 167906284 167906554 1668669 1668669 D NO +NM_025505_Blzf1 chr1 166219931 166237615 - chr1 164215623 164215935 2003996 2021680 U NO +NM_025505_Blzf1 chr1 166219931 166237615 - chr1 163827897 163828062 2391869 2409553 U NO +NM_025557_Pcp4l1 chr1 173103394 173126370 - chr1 172620917 172621080 482314 505290 U NO +NM_025557_Pcp4l1 chr1 173103394 173126370 - chr1 172620779 172620912 482482 505458 U NO +NM_025557_Pcp4l1 chr1 173103394 173126370 - chr1 174376470 174376659 1250100 1250100 D NO +NM_025557_Pcp4l1 chr1 173103394 173126370 - chr1 170255081 170255260 2848134 2871110 U NO +NM_025569_Mgst3 chr1 169302037 169323952 - chr1 170255081 170255260 931129 931129 D NO +NM_025569_Mgst3 chr1 169302037 169323952 - chr1 167906284 167906554 1395483 1417398 U NO +NM_025569_Mgst3 chr1 169302037 169323952 - chr1 167222964 167223261 2078776 2100691 U NO +NM_025569_Mgst3 chr1 169302037 169323952 - chr1 172620779 172620912 3296827 3296827 D NO +NM_025596_Prelid1 chr1 63410974 63469460 - chr1 63664888 63665018 195428 195428 D NO +NM_025596_Prelid1 chr1 63410974 63469460 - chr1 55283572 55283675 8127299 8185785 U NO +NM_025596_Prelid1 chr1 63410974 63469460 - chr1 54631692 54631815 8779159 8837645 U NO +NM_025596_Prelid1 chr1 63410974 63469460 - chr1 72769824 72770056 9300364 9300364 D NO +NM_025597_Ndufb3 chr1 58631453 58653239 + chr1 55283572 55283675 3347778 3347778 D NO +NM_025597_Ndufb3 chr1 58631453 58653239 + chr1 54631692 54631815 3999638 3999638 D NO +NM_025597_Ndufb3 chr1 58631453 58653239 + chr1 63664888 63665018 5011649 5033435 U NO +NM_025597_Ndufb3 chr1 58631453 58653239 + chr1 52625416 52625560 6005893 6005893 D NO +NM_025677_Tsen15 chr1 154217920 154233812 - chr1 154971572 154971673 737760 737760 D NO +NM_025677_Tsen15 chr1 154217920 154233812 - chr1 155123313 155123435 889501 889501 D NO +NM_025677_Tsen15 chr1 154217920 154233812 - chr1 158510523 158510813 4276711 4276711 D NO +NM_025677_Tsen15 chr1 154217920 154233812 - chr1 158537267 158537411 4303455 4303455 D NO +NM_025683_Rpe chr1 66747223 66839854 + chr1 63664888 63665018 3082205 3082205 D NO +NM_025683_Rpe chr1 66747223 66839854 + chr1 72769824 72770056 5929970 6022601 U NO +NM_025683_Rpe chr1 66747223 66839854 + chr1 72770058 72770226 5930204 6022835 U NO +NM_025683_Rpe chr1 66747223 66839854 + chr1 72815517 72815742 5975663 6068294 U NO +NM_025746_4933415F23Rik chr1 23107346 23263222 - chr1 24609562 24609623 1346340 1346340 D NO +NM_025746_4933415F23Rik chr1 23107346 23263222 - chr1 24609923 24609992 1346701 1346701 D NO +NM_025746_4933415F23Rik chr1 23107346 23263222 - chr1 24730996 24731077 1467774 1467774 D NO +NM_025746_4933415F23Rik chr1 23107346 23263222 - chr1 26734195 26734485 3470973 3470973 D NO +NM_025773_Ube2w chr1 16530881 16609419 - chr1 17030405 17030545 420986 420986 D NO +NM_025773_Ube2w chr1 16530881 16609419 - chr1 13829227 13829564 2701317 2779855 U NO +NM_025773_Ube2w chr1 16530881 16609419 - chr1 10617233 10617437 5913444 5991982 U NO +NM_025773_Ube2w chr1 16530881 16609419 - chr1 9619175 9619382 6911499 6990037 U NO +NM_025784_Bcs1l chr1 74634010 74639375 + chr1 75481920 75482054 842545 847910 U NO +NM_025784_Bcs1l chr1 74634010 74639375 + chr1 72815517 72815742 1818268 1818268 D NO +NM_025784_Bcs1l chr1 74634010 74639375 + chr1 72770058 72770226 1863784 1863784 D NO +NM_025784_Bcs1l chr1 74634010 74639375 + chr1 72769824 72770056 1863954 1863954 D NO +NM_025819_1200016B10Rik chr1 153214763 153304502 - chr1 154971572 154971673 1667070 1667070 D NO +NM_025819_1200016B10Rik chr1 153214763 153304502 - chr1 155123313 155123435 1818811 1818811 D NO +NM_025819_1200016B10Rik chr1 153214763 153304502 - chr1 158510523 158510813 5206021 5206021 D NO +NM_025819_1200016B10Rik chr1 153214763 153304502 - chr1 158537267 158537411 5232765 5232765 D NO +NM_025864_Tmem206 chr1 193149566 193176819 + chr1 194258648 194259032 1081829 1109082 U NO +NM_025864_Tmem206 chr1 193149566 193176819 + chr1 194645118 194645475 1468299 1495552 U NO +NM_025864_Tmem206 chr1 193149566 193176819 + chr1 194957396 194957723 1780577 1807830 U NO +NM_025864_Tmem206 chr1 193149566 193176819 + chr1 195324443 195324741 2147624 2174877 U NO +NM_025867_Serpinb11 chr1 109246610 109277052 + chr1 108747519 108747791 498819 498819 D NO +NM_025867_Serpinb11 chr1 109246610 109277052 + chr1 120760212 120760461 11483160 11513602 U NO +NM_025867_Serpinb11 chr1 109246610 109277052 + chr1 95186508 95186637 14059973 14059973 D NO +NM_025867_Serpinb11 chr1 109246610 109277052 + chr1 92070253 92070431 17176179 17176179 D NO +NM_025920_Thap4 chr1 95602021 95651542 - chr1 95186508 95186637 415384 464905 U NO +NM_025920_Thap4 chr1 95602021 95651542 - chr1 92070253 92070431 3531590 3581111 U NO +NM_025920_Thap4 chr1 95602021 95651542 - chr1 91496155 91496319 4105702 4155223 U NO +NM_025920_Thap4 chr1 95602021 95651542 - chr1 91496003 91496145 4105876 4155397 U NO +NM_025964_Fam119a chr1 64653048 64670990 - chr1 63664888 63665018 988030 1005972 U NO +NM_025964_Fam119a chr1 64653048 64670990 - chr1 72769824 72770056 8098834 8098834 D NO +NM_025964_Fam119a chr1 64653048 64670990 - chr1 72770058 72770226 8099068 8099068 D NO +NM_025964_Fam119a chr1 64653048 64670990 - chr1 72815517 72815742 8144527 8144527 D NO +NM_026024_Ube2t chr1 136857731 136870739 + chr1 136956468 136956598 85729 98737 U NO +NM_026024_Ube2t chr1 136857731 136870739 + chr1 135851853 135852218 1005513 1005513 D NO +NM_026024_Ube2t chr1 136857731 136870739 + chr1 135582677 135582828 1274903 1274903 D NO +NM_026024_Ube2t chr1 136857731 136870739 + chr1 138437726 138437860 1566987 1579995 U NO +NM_026041_Rrp15 chr1 188544857 188573732 - chr1 185854947 185855105 2689752 2718627 U NO +NM_026041_Rrp15 chr1 188544857 188573732 - chr1 194258648 194259032 5684916 5684916 D NO +NM_026041_Rrp15 chr1 188544857 188573732 - chr1 194645118 194645475 6071386 6071386 D NO +NM_026041_Rrp15 chr1 188544857 188573732 - chr1 182479646 182479905 6064952 6093827 U NO +NM_026078_Pigc chr1 163860747 163957217 + chr1 163827897 163828062 32685 32685 D NO +NM_026078_Pigc chr1 163860747 163957217 + chr1 164215623 164215935 258406 354876 U NO +NM_026078_Pigc chr1 163860747 163957217 + chr1 167222964 167223261 3265747 3362217 U NO +NM_026078_Pigc chr1 163860747 163957217 + chr1 167906284 167906554 3949067 4045537 U NO +NM_026123_Unc50 chr1 37486671 37504876 + chr1 36106813 36107058 1379613 1379613 D NO +NM_026123_Unc50 chr1 37486671 37504876 + chr1 39492140 39492513 1987264 2005469 U NO +NM_026123_Unc50 chr1 37486671 37504876 + chr1 40325917 40326123 2821041 2839246 U NO +NM_026123_Unc50 chr1 37486671 37504876 + chr1 34206924 34207100 3279571 3279571 D NO +NM_026171_Nvl chr1 183008557 183074318 - chr1 182479646 182479905 528652 594413 U NO +NM_026171_Nvl chr1 183008557 183074318 - chr1 181061299 181061446 1947111 2012872 U NO +NM_026171_Nvl chr1 183008557 183074318 - chr1 185854947 185855105 2780629 2780629 D NO +NM_026171_Nvl chr1 183008557 183074318 - chr1 174376470 174376659 8631898 8697659 U NO +NM_026187_Ankzf1 chr1 75188977 75192143 + chr1 75481920 75482054 289777 292943 U NO +NM_026187_Ankzf1 chr1 75188977 75192143 + chr1 77457642 77457791 2265499 2268665 U NO +NM_026187_Ankzf1 chr1 75188977 75192143 + chr1 72815517 72815742 2373235 2373235 D NO +NM_026187_Ankzf1 chr1 75188977 75192143 + chr1 72770058 72770226 2418751 2418751 D NO +NM_026187_Ankzf1 chr1 75192524 75195962 + chr1 75481920 75482054 285958 289396 U NO +NM_026187_Ankzf1 chr1 75192524 75195962 + chr1 77457642 77457791 2261680 2265118 U NO +NM_026187_Ankzf1 chr1 75192524 75195962 + chr1 72815517 72815742 2376782 2376782 D NO +NM_026187_Ankzf1 chr1 75192524 75195962 + chr1 72770058 72770226 2422298 2422298 D NO +NM_026195_Atic chr1 71584010 71626205 + chr1 72769824 72770056 1143619 1185814 U NO +NM_026195_Atic chr1 71584010 71626205 + chr1 72770058 72770226 1143853 1186048 U NO +NM_026195_Atic chr1 71584010 71626205 + chr1 72815517 72815742 1189312 1231507 U NO +NM_026195_Atic chr1 71584010 71626205 + chr1 75481920 75482054 3855715 3897910 U NO +NM_026234_Pigm chr1 174306609 174314210 + chr1 174376470 174376659 62260 69861 U NO +NM_026234_Pigm chr1 174306609 174314210 + chr1 172620917 172621080 1685529 1685529 D NO +NM_026234_Pigm chr1 174306609 174314210 + chr1 172620779 172620912 1685697 1685697 D NO +NM_026234_Pigm chr1 174306609 174314210 + chr1 170255081 170255260 4051349 4051349 D NO +NM_026241_Ankrd39 chr1 36594353 36604077 - chr1 36106813 36107058 487295 497019 U NO +NM_026241_Ankrd39 chr1 36594353 36604077 - chr1 34206924 34207100 2387253 2396977 U NO +NM_026241_Ankrd39 chr1 36594353 36604077 - chr1 39492140 39492513 2888063 2888063 D NO +NM_026241_Ankrd39 chr1 36594353 36604077 - chr1 40325917 40326123 3721840 3721840 D NO +NM_026250_Zh2c2 chr1 99658035 99706130 + chr1 95186508 95186637 4471398 4471398 D NO +NM_026250_Zh2c2 chr1 99658035 99706130 + chr1 92070253 92070431 7587604 7587604 D NO +NM_026250_Zh2c2 chr1 99658035 99706130 + chr1 91496155 91496319 8161716 8161716 D NO +NM_026250_Zh2c2 chr1 99658035 99706130 + chr1 91496003 91496145 8161890 8161890 D NO +NM_026321_Fam174a chr1 97174825 97346168 + chr1 95186508 95186637 1988188 1988188 D NO +NM_026321_Fam174a chr1 97174825 97346168 + chr1 92070253 92070431 5104394 5104394 D NO +NM_026321_Fam174a chr1 97174825 97346168 + chr1 91496155 91496319 5678506 5678506 D NO +NM_026321_Fam174a chr1 97174825 97346168 + chr1 91496003 91496145 5678680 5678680 D NO +NM_026367_Gpatch2 chr1 189010707 189180483 + chr1 185854947 185855105 3155602 3155602 D NO +NM_026367_Gpatch2 chr1 189010707 189180483 + chr1 194258648 194259032 5078165 5247941 U NO +NM_026367_Gpatch2 chr1 189010707 189180483 + chr1 194645118 194645475 5464635 5634411 U NO +NM_026367_Gpatch2 chr1 189010707 189180483 + chr1 194957396 194957723 5776913 5946689 U NO +NM_026369_Arpc5 chr1 154613024 154638792 + chr1 154971572 154971673 332780 358548 U NO +NM_026369_Arpc5 chr1 154613024 154638792 + chr1 155123313 155123435 484521 510289 U NO +NM_026369_Arpc5 chr1 154613024 154638792 + chr1 158510523 158510813 3871731 3897499 U NO +NM_026369_Arpc5 chr1 154613024 154638792 + chr1 158537267 158537411 3898475 3924243 U NO +NM_026375_Ahctf1 chr1 181675025 181733948 - chr1 181061299 181061446 613579 672502 U NO +NM_026375_Ahctf1 chr1 181675025 181733948 - chr1 182479646 182479905 745698 745698 D NO +NM_026375_Ahctf1 chr1 181675025 181733948 - chr1 185854947 185855105 4120999 4120999 D NO +NM_026375_Ahctf1 chr1 181675025 181733948 - chr1 174376470 174376659 7298366 7357289 U NO +NM_026380_Rgs8 chr1 155468581 155563679 + chr1 155123313 155123435 345146 345146 D NO +NM_026380_Rgs8 chr1 155468581 155563679 + chr1 154971572 154971673 496908 496908 D NO +NM_026380_Rgs8 chr1 155468581 155563679 + chr1 158510523 158510813 2946844 3041942 U NO +NM_026380_Rgs8 chr1 155468581 155563679 + chr1 158537267 158537411 2973588 3068686 U NO +NM_026390_Ubxn4 chr1 130140557 130175951 + chr1 132950929 132951247 2774978 2810372 U NO +NM_026390_Ubxn4 chr1 130140557 130175951 + chr1 133114860 133115015 2938909 2974303 U NO +NM_026390_Ubxn4 chr1 130140557 130175951 + chr1 135582677 135582828 5406726 5442120 U NO +NM_026390_Ubxn4 chr1 130140557 130175951 + chr1 135851853 135852218 5675902 5711296 U NO +NM_026430_Uxs1 chr1 43804890 43884625 - chr1 44195449 44195639 310824 310824 D NO +NM_026430_Uxs1 chr1 43804890 43884625 - chr1 40325917 40326123 3478767 3558502 U NO +NM_026430_Uxs1 chr1 43804890 43884625 - chr1 39492140 39492513 4312377 4392112 U NO +NM_026430_Uxs1 chr1 43804890 43884625 - chr1 36106813 36107058 7697832 7777567 U NO +NM_026454_Ube2f chr1 93146888 93187187 + chr1 92070253 92070431 1076457 1076457 D NO +NM_026454_Ube2f chr1 93146888 93187187 + chr1 91496155 91496319 1650569 1650569 D NO +NM_026454_Ube2f chr1 93146888 93187187 + chr1 91496003 91496145 1650743 1650743 D NO +NM_026454_Ube2f chr1 93146888 93187187 + chr1 95186508 95186637 1999321 2039620 U NO +NM_026456_Tceb1 chr1 16603307 16655630 - chr1 17030405 17030545 374775 374775 D NO +NM_026456_Tceb1 chr1 16603307 16655630 - chr1 13829227 13829564 2773743 2826066 U NO +NM_026456_Tceb1 chr1 16603307 16655630 - chr1 10617233 10617437 5985870 6038193 U NO +NM_026456_Tceb1 chr1 16603307 16655630 - chr1 9619175 9619382 6983925 7036248 U NO +NM_026472_Mki67ip chr1 120218436 120230401 + chr1 120760212 120760461 529811 541776 U NO +NM_026472_Mki67ip chr1 120218436 120230401 + chr1 108747519 108747791 11470645 11470645 D NO +NM_026472_Mki67ip chr1 120218436 120230401 + chr1 132950929 132951247 12720528 12732493 U NO +NM_026472_Mki67ip chr1 120218436 120230401 + chr1 133114860 133115015 12884459 12896424 U NO +NM_026493_Cspp1 chr1 10028093 10126849 + chr1 9619175 9619382 408711 408711 D NO +NM_026493_Cspp1 chr1 10028093 10126849 + chr1 9619046 9619167 408926 408926 D NO +NM_026493_Cspp1 chr1 10028093 10126849 + chr1 10617233 10617437 490384 589140 U NO +NM_026493_Cspp1 chr1 10028093 10126849 + chr1 13829227 13829564 3702378 3801134 U NO +NM_026500_Ddx59 chr1 138242798 138336799 + chr1 138437726 138437860 100927 194928 U NO +NM_026500_Ddx59 chr1 138242798 138336799 + chr1 136956468 136956598 1286200 1286200 D NO +NM_026500_Ddx59 chr1 138242798 138336799 + chr1 140381656 140381785 2044857 2138858 U NO +NM_026500_Ddx59 chr1 138242798 138336799 + chr1 135851853 135852218 2390580 2390580 D NO +NM_026503_1110058L19Rik chr1 24002785 24017210 - chr1 24609562 24609623 592352 592352 D NO +NM_026503_1110058L19Rik chr1 24002785 24017210 - chr1 24609923 24609992 592713 592713 D NO +NM_026503_1110058L19Rik chr1 24002785 24017210 - chr1 24730996 24731077 713786 713786 D NO +NM_026503_1110058L19Rik chr1 24002785 24017210 - chr1 26734195 26734485 2716985 2716985 D NO +NM_026626_Efcab2 chr1 180335927 180414624 + chr1 181061299 181061446 646675 725372 U NO +NM_026626_Efcab2 chr1 180335927 180414624 + chr1 182479646 182479905 2065022 2143719 U NO +NM_026626_Efcab2 chr1 180335927 180414624 + chr1 185854947 185855105 5440323 5519020 U NO +NM_026626_Efcab2 chr1 180335927 180414624 + chr1 174376470 174376659 5959268 5959268 D NO +NM_026680_Golt1a chr1 135206322 135226478 + chr1 135582677 135582828 356199 376355 U NO +NM_026680_Golt1a chr1 135206322 135226478 + chr1 135851853 135852218 625375 645531 U NO +NM_026680_Golt1a chr1 135206322 135226478 + chr1 136956468 136956598 1729990 1750146 U NO +NM_026680_Golt1a chr1 135206322 135226478 + chr1 133114860 133115015 2091307 2091307 D NO +NM_026713_Mogat1 chr1 78496730 78564215 + chr1 78630893 78631160 66678 134163 U NO +NM_026713_Mogat1 chr1 78496730 78564215 + chr1 77457642 77457791 1038939 1038939 D NO +NM_026713_Mogat1 chr1 78496730 78564215 + chr1 75481920 75482054 3014676 3014676 D NO +NM_026713_Mogat1 chr1 78496730 78564215 + chr1 72815517 72815742 5680988 5680988 D NO +NM_026719_Lmbrd1 chr1 24593456 24847969 + chr1 24609562 24609623 0 16106 . YES +NM_026719_Lmbrd1 chr1 24593456 24847969 + chr1 24609923 24609992 0 16467 . YES +NM_026719_Lmbrd1 chr1 24593456 24847969 + chr1 24730996 24731077 0 137540 . YES +NM_026719_Lmbrd1 chr1 24593456 24847969 + chr1 26734195 26734485 1886226 2140739 U NO +NM_026719_Lmbrd1 chr1 24820582 24823143 + chr1 24730996 24731077 89505 89505 D NO +NM_026719_Lmbrd1 chr1 24820582 24823143 + chr1 24609923 24609992 210590 210590 D NO +NM_026719_Lmbrd1 chr1 24820582 24823143 + chr1 24609562 24609623 210959 210959 D NO +NM_026719_Lmbrd1 chr1 24820582 24823143 + chr1 26734195 26734485 1911052 1913613 U NO +NM_026725_Dusp23 chr1 174560902 174563119 - chr1 174376470 174376659 184243 186460 U NO +NM_026725_Dusp23 chr1 174560902 174563119 - chr1 172620917 172621080 1939822 1942039 U NO +NM_026725_Dusp23 chr1 174560902 174563119 - chr1 172620779 172620912 1939990 1942207 U NO +NM_026725_Dusp23 chr1 174560902 174563119 - chr1 170255081 170255260 4305642 4307859 U NO +NM_026796_Smyd2 chr1 191704373 191746222 - chr1 194258648 194259032 2512426 2512426 D NO +NM_026796_Smyd2 chr1 191704373 191746222 - chr1 194645118 194645475 2898896 2898896 D NO +NM_026796_Smyd2 chr1 191704373 191746222 - chr1 194957396 194957723 3211174 3211174 D NO +NM_026796_Smyd2 chr1 191704373 191746222 - chr1 195324443 195324741 3578221 3578221 D NO +NM_026823_Arl8a chr1 137043216 137053347 + chr1 136956468 136956598 86618 86618 D NO +NM_026823_Arl8a chr1 137043216 137053347 + chr1 135851853 135852218 1190998 1190998 D NO +NM_026823_Arl8a chr1 137043216 137053347 + chr1 138437726 138437860 1384379 1394510 U NO +NM_026823_Arl8a chr1 137043216 137053347 + chr1 135582677 135582828 1460388 1460388 D NO +NM_026846_Zfand2b chr1 75165237 75168196 + chr1 75481920 75482054 313724 316683 U NO +NM_026846_Zfand2b chr1 75165237 75168196 + chr1 77457642 77457791 2289446 2292405 U NO +NM_026846_Zfand2b chr1 75165237 75168196 + chr1 72815517 72815742 2349495 2349495 D NO +NM_026846_Zfand2b chr1 75165237 75168196 + chr1 72770058 72770226 2395011 2395011 D NO +NM_026850_Pdcl3 chr1 39044622 39054081 + chr1 39492140 39492513 438059 447518 U NO +NM_026850_Pdcl3 chr1 39044622 39054081 + chr1 40325917 40326123 1271836 1281295 U NO +NM_026850_Pdcl3 chr1 39044622 39054081 + chr1 36106813 36107058 2937564 2937564 D NO +NM_026850_Pdcl3 chr1 39044622 39054081 + chr1 34206924 34207100 4837522 4837522 D NO +NM_026913_Mitd1 chr1 37931656 37947242 - chr1 39492140 39492513 1544898 1544898 D NO +NM_026913_Mitd1 chr1 37931656 37947242 - chr1 36106813 36107058 1824598 1840184 U NO +NM_026913_Mitd1 chr1 37931656 37947242 - chr1 40325917 40326123 2378675 2378675 D NO +NM_026913_Mitd1 chr1 37931656 37947242 - chr1 34206924 34207100 3724556 3740142 U NO +NM_026977_1810031K17Rik chr1 75131500 75139270 - chr1 75481920 75482054 342650 342650 D NO +NM_026977_1810031K17Rik chr1 75131500 75139270 - chr1 77457642 77457791 2318372 2318372 D NO +NM_026977_1810031K17Rik chr1 75131500 75139270 - chr1 72815517 72815742 2315758 2323528 U NO +NM_026977_1810031K17Rik chr1 75131500 75139270 - chr1 72770058 72770226 2361274 2369044 U NO +NM_027098_Mrpl30 chr1 37947313 37959167 + chr1 39492140 39492513 1532973 1544827 U NO +NM_027098_Mrpl30 chr1 37947313 37959167 + chr1 36106813 36107058 1840255 1840255 D NO +NM_027098_Mrpl30 chr1 37947313 37959167 + chr1 40325917 40326123 2366750 2378604 U NO +NM_027098_Mrpl30 chr1 37947313 37959167 + chr1 34206924 34207100 3740213 3740213 D NO +NM_027154_Tmbim1 chr1 74334823 74352176 - chr1 75481920 75482054 1129744 1129744 D NO +NM_027154_Tmbim1 chr1 74334823 74352176 - chr1 72815517 72815742 1519081 1536434 U NO +NM_027154_Tmbim1 chr1 74334823 74352176 - chr1 72770058 72770226 1564597 1581950 U NO +NM_027154_Tmbim1 chr1 74334823 74352176 - chr1 72769824 72770056 1564767 1582120 U NO +NM_027159_Ccdc115 chr1 34491854 34496517 - chr1 34206924 34207100 284754 289417 U NO +NM_027159_Ccdc115 chr1 34491854 34496517 - chr1 36106813 36107058 1610296 1610296 D NO +NM_027159_Ccdc115 chr1 34491854 34496517 - chr1 39492140 39492513 4995623 4995623 D NO +NM_027159_Ccdc115 chr1 34491854 34496517 - chr1 40325917 40326123 5829400 5829400 D NO +NM_027188_Smyd3 chr1 180885172 181448168 - chr1 181061299 181061446 0 386722 . YES +NM_027188_Smyd3 chr1 180885172 181448168 - chr1 182479646 182479905 1031478 1031478 D NO +NM_027188_Smyd3 chr1 180885172 181448168 - chr1 185854947 185855105 4406779 4406779 D NO +NM_027188_Smyd3 chr1 180885172 181448168 - chr1 174376470 174376659 6508513 7071509 U NO +NM_027300_Spata3 chr1 87913403 87926533 + chr1 88408969 88409267 482436 495566 U NO +NM_027300_Spata3 chr1 87913403 87926533 + chr1 89989553 89989714 2063020 2076150 U NO +NM_027300_Spata3 chr1 87913403 87926533 + chr1 90412932 90413132 2486399 2499529 U NO +NM_027300_Spata3 chr1 87913403 87926533 + chr1 90592499 90592629 2665966 2679096 U NO +NM_027351_Ppil3 chr1 58486110 58502330 - chr1 55283572 55283675 3202435 3218655 U NO +NM_027351_Ppil3 chr1 58486110 58502330 - chr1 54631692 54631815 3854295 3870515 U NO +NM_027351_Ppil3 chr1 58486110 58502330 - chr1 63664888 63665018 5162558 5162558 D NO +NM_027351_Ppil3 chr1 58486110 58502330 - chr1 52625416 52625560 5860550 5876770 U NO +NM_027357_Psmd1 chr1 87958636 88174849 + chr1 88408969 88409267 234120 450333 U NO +NM_027357_Psmd1 chr1 87958636 88174849 + chr1 89989553 89989714 1814704 2030917 U NO +NM_027357_Psmd1 chr1 87958636 88174849 + chr1 90412932 90413132 2238083 2454296 U NO +NM_027357_Psmd1 chr1 87958636 88174849 + chr1 90592499 90592629 2417650 2633863 U NO +NM_027407_Ica1l chr1 60039354 60099956 - chr1 63664888 63665018 3564932 3564932 D NO +NM_027407_Ica1l chr1 60039354 60099956 - chr1 55283572 55283675 4755679 4816281 U NO +NM_027407_Ica1l chr1 60039354 60099956 - chr1 54631692 54631815 5407539 5468141 U NO +NM_027407_Ica1l chr1 60039354 60099956 - chr1 52625416 52625560 7413794 7474396 U NO +NM_027415_Tmem70 chr1 16610621 16668358 + chr1 17030405 17030545 362047 419784 U NO +NM_027415_Tmem70 chr1 16610621 16668358 + chr1 13829227 13829564 2781057 2781057 D NO +NM_027415_Tmem70 chr1 16610621 16668358 + chr1 10617233 10617437 5993184 5993184 D NO +NM_027415_Tmem70 chr1 16610621 16668358 + chr1 9619175 9619382 6991239 6991239 D NO +NM_027430_Brp44 chr1 167390752 167411345 + chr1 167222964 167223261 167491 167491 D NO +NM_027430_Brp44 chr1 167390752 167411345 + chr1 167906284 167906554 494939 515532 U NO +NM_027430_Brp44 chr1 167390752 167411345 + chr1 170255081 170255260 2843736 2864329 U NO +NM_027430_Brp44 chr1 167390752 167411345 + chr1 164215623 164215935 3174817 3174817 D NO +NM_027534_Kdsr chr1 108617007 108656357 - chr1 108747519 108747791 91162 91162 D NO +NM_027534_Kdsr chr1 108617007 108656357 - chr1 120760212 120760461 12103855 12103855 D NO +NM_027534_Kdsr chr1 108617007 108656357 - chr1 95186508 95186637 13430370 13469720 U NO +NM_027534_Kdsr chr1 108617007 108656357 - chr1 92070253 92070431 16546576 16585926 U NO +NM_027548_Serpinb7 chr1 109296172 109349266 + chr1 108747519 108747791 548381 548381 D NO +NM_027548_Serpinb7 chr1 109296172 109349266 + chr1 120760212 120760461 11410946 11464040 U NO +NM_027548_Serpinb7 chr1 109296172 109349266 + chr1 95186508 95186637 14109535 14109535 D NO +NM_027548_Serpinb7 chr1 109296172 109349266 + chr1 92070253 92070431 17225741 17225741 D NO +NM_027551_Klhl30 chr1 93244259 93259068 + chr1 92070253 92070431 1173828 1173828 D NO +NM_027551_Klhl30 chr1 93244259 93259068 + chr1 91496155 91496319 1747940 1747940 D NO +NM_027551_Klhl30 chr1 93244259 93259068 + chr1 91496003 91496145 1748114 1748114 D NO +NM_027551_Klhl30 chr1 93244259 93259068 + chr1 95186508 95186637 1927440 1942249 U NO +NM_027637_4931428L18Rik chr1 31197921 31279501 - chr1 34206924 34207100 2927423 2927423 D NO +NM_027637_4931428L18Rik chr1 31197921 31279501 - chr1 26734195 26734485 4463436 4545016 U NO +NM_027637_4931428L18Rik chr1 31197921 31279501 - chr1 36106813 36107058 4827312 4827312 D NO +NM_027637_4931428L18Rik chr1 31197921 31279501 - chr1 24730996 24731077 6466844 6548424 U NO +NM_027661_Hsfy2 chr1 56668158 56822175 - chr1 55283572 55283675 1384483 1538500 U NO +NM_027661_Hsfy2 chr1 56668158 56822175 - chr1 54631692 54631815 2036343 2190360 U NO +NM_027661_Hsfy2 chr1 56668158 56822175 - chr1 52625416 52625560 4042598 4196615 U NO +NM_027661_Hsfy2 chr1 56668158 56822175 - chr1 63664888 63665018 6842713 6842713 D NO +NM_027677_Gpr39 chr1 127573518 127795359 + chr1 132950929 132951247 5155570 5377411 U NO +NM_027677_Gpr39 chr1 127573518 127795359 + chr1 133114860 133115015 5319501 5541342 U NO +NM_027677_Gpr39 chr1 127573518 127795359 + chr1 120760212 120760461 6813057 6813057 D NO +NM_027677_Gpr39 chr1 127573518 127795359 + chr1 135582677 135582828 7787318 8009159 U NO +NM_027678_Zranb3 chr1 129846941 130025531 - chr1 132950929 132951247 2925398 2925398 D NO +NM_027678_Zranb3 chr1 129846941 130025531 - chr1 133114860 133115015 3089329 3089329 D NO +NM_027678_Zranb3 chr1 129846941 130025531 - chr1 135582677 135582828 5557146 5557146 D NO +NM_027678_Zranb3 chr1 129846941 130025531 - chr1 135851853 135852218 5826322 5826322 D NO +NM_027725_Wdr69 chr1 83156310 83207145 + chr1 78630893 78631160 4525150 4525150 D NO +NM_027725_Wdr69 chr1 83156310 83207145 + chr1 88408969 88409267 5201824 5252659 U NO +NM_027725_Wdr69 chr1 83156310 83207145 + chr1 77457642 77457791 5698519 5698519 D NO +NM_027725_Wdr69 chr1 83156310 83207145 + chr1 89989553 89989714 6782408 6833243 U NO +NM_027884_Tns1 chr1 73956820 74144891 - chr1 72815517 72815742 1141078 1329149 U NO +NM_027884_Tns1 chr1 73956820 74144891 - chr1 75481920 75482054 1337029 1337029 D NO +NM_027884_Tns1 chr1 73956820 74144891 - chr1 72770058 72770226 1186594 1374665 U NO +NM_027884_Tns1 chr1 73956820 74144891 - chr1 72769824 72770056 1186764 1374835 U NO +NM_027886_Stk11ip chr1 75518100 75533910 + chr1 75481920 75482054 36046 36046 D NO +NM_027886_Stk11ip chr1 75518100 75533910 + chr1 77457642 77457791 1923732 1939542 U NO +NM_027886_Stk11ip chr1 75518100 75533910 + chr1 72815517 72815742 2702358 2702358 D NO +NM_027886_Stk11ip chr1 75518100 75533910 + chr1 72770058 72770226 2747874 2747874 D NO +NM_027893_Pvrl4 chr1 173292993 173318729 + chr1 172620917 172621080 671913 671913 D NO +NM_027893_Pvrl4 chr1 173292993 173318729 + chr1 172620779 172620912 672081 672081 D NO +NM_027893_Pvrl4 chr1 173292993 173318729 + chr1 174376470 174376659 1057741 1083477 U NO +NM_027893_Pvrl4 chr1 173292993 173318729 + chr1 170255081 170255260 3037733 3037733 D NO +NM_027921_Slc16a14 chr1 84902046 84931841 - chr1 88408969 88409267 3477128 3477128 D NO +NM_027921_Slc16a14 chr1 84902046 84931841 - chr1 89989553 89989714 5057712 5057712 D NO +NM_027921_Slc16a14 chr1 84902046 84931841 - chr1 90412932 90413132 5481091 5481091 D NO +NM_027921_Slc16a14 chr1 84902046 84931841 - chr1 90592499 90592629 5660658 5660658 D NO +NM_027971_Serpinb12 chr1 108831026 108853655 + chr1 108747519 108747791 83235 83235 D NO +NM_027971_Serpinb12 chr1 108831026 108853655 + chr1 120760212 120760461 11906557 11929186 U NO +NM_027971_Serpinb12 chr1 108831026 108853655 + chr1 95186508 95186637 13644389 13644389 D NO +NM_027971_Serpinb12 chr1 108831026 108853655 + chr1 92070253 92070431 16760595 16760595 D NO +NM_027979_Chit1 chr1 136007829 136048117 + chr1 135851853 135852218 155611 155611 D NO +NM_027979_Chit1 chr1 136007829 136048117 + chr1 135582677 135582828 425001 425001 D NO +NM_027979_Chit1 chr1 136007829 136048117 + chr1 136956468 136956598 908351 948639 U NO +NM_027979_Chit1 chr1 136007829 136048117 + chr1 138437726 138437860 2389609 2429897 U NO +NM_028057_Cyb5r1 chr1 136302358 136308302 + chr1 135851853 135852218 450140 450140 D NO +NM_028057_Cyb5r1 chr1 136302358 136308302 + chr1 136956468 136956598 648166 654110 U NO +NM_028057_Cyb5r1 chr1 136302358 136308302 + chr1 135582677 135582828 719530 719530 D NO +NM_028057_Cyb5r1 chr1 136302358 136308302 + chr1 138437726 138437860 2129424 2135368 U NO +NM_028091_Osgepl1 chr1 53370488 53383184 + chr1 52625416 52625560 744928 744928 D NO +NM_028091_Osgepl1 chr1 53370488 53383184 + chr1 54631692 54631815 1248508 1261204 U NO +NM_028091_Osgepl1 chr1 53370488 53383184 + chr1 55283572 55283675 1900388 1913084 U NO +NM_028091_Osgepl1 chr1 53370488 53383184 + chr1 44195449 44195639 9174849 9174849 D NO +NM_028135_Tmem163 chr1 129382910 129574703 - chr1 132950929 132951247 3376226 3376226 D NO +NM_028135_Tmem163 chr1 129382910 129574703 - chr1 133114860 133115015 3540157 3540157 D NO +NM_028135_Tmem163 chr1 129382910 129574703 - chr1 135582677 135582828 6007974 6007974 D NO +NM_028135_Tmem163 chr1 129382910 129574703 - chr1 135851853 135852218 6277150 6277150 D NO +NM_028173_Tram1 chr1 13554779 13579965 - chr1 13829227 13829564 249262 249262 D NO +NM_028173_Tram1 chr1 13554779 13579965 - chr1 10617233 10617437 2937342 2962528 U NO +NM_028173_Tram1 chr1 13554779 13579965 - chr1 17030405 17030545 3450440 3450440 D NO +NM_028173_Tram1 chr1 13554779 13579965 - chr1 9619175 9619382 3935397 3960583 U NO +NM_028250_Acbd6 chr1 157358146 157536633 + chr1 158510523 158510813 973890 1152377 U NO +NM_028250_Acbd6 chr1 157358146 157536633 + chr1 158537267 158537411 1000634 1179121 U NO +NM_028250_Acbd6 chr1 157358146 157536633 + chr1 158580638 158580759 1044005 1222492 U NO +NM_028250_Acbd6 chr1 157358146 157536633 + chr1 158835251 158835391 1298618 1477105 U NO +NM_028320_Adipor1 chr1 136311830 136329944 + chr1 135851853 135852218 459612 459612 D NO +NM_028320_Adipor1 chr1 136311830 136329944 + chr1 136956468 136956598 626524 644638 U NO +NM_028320_Adipor1 chr1 136311830 136329944 + chr1 135582677 135582828 729002 729002 D NO +NM_028320_Adipor1 chr1 136311830 136329944 + chr1 138437726 138437860 2107782 2125896 U NO +NM_028333_Angptl1 chr1 158769061 158791209 + chr1 158835251 158835391 44042 66190 U NO +NM_028333_Angptl1 chr1 158769061 158791209 + chr1 158580638 158580759 188302 188302 D NO +NM_028333_Angptl1 chr1 158769061 158791209 + chr1 158537267 158537411 231650 231650 D NO +NM_028333_Angptl1 chr1 158769061 158791209 + chr1 158510523 158510813 258248 258248 D NO +NM_028399_Ccnt2 chr1 129670253 129704638 + chr1 132950929 132951247 3246291 3280676 U NO +NM_028399_Ccnt2 chr1 129670253 129704638 + chr1 133114860 133115015 3410222 3444607 U NO +NM_028399_Ccnt2 chr1 129670253 129704638 + chr1 135582677 135582828 5878039 5912424 U NO +NM_028399_Ccnt2 chr1 129670253 129704638 + chr1 135851853 135852218 6147215 6181600 U NO +NM_028408_Cnih3 chr1 183282759 183419790 + chr1 182479646 182479905 802854 802854 D NO +NM_028408_Cnih3 chr1 183282759 183419790 + chr1 181061299 181061446 2221313 2221313 D NO +NM_028408_Cnih3 chr1 183282759 183419790 + chr1 185854947 185855105 2435157 2572188 U NO +NM_028408_Cnih3 chr1 183282759 183419790 + chr1 174376470 174376659 8906100 8906100 D NO +NM_028450_Gulp1 chr1 44608366 44896390 + chr1 44195449 44195639 412727 412727 D NO +NM_028450_Gulp1 chr1 44608366 44896390 + chr1 40325917 40326123 4282243 4282243 D NO +NM_028450_Gulp1 chr1 44608366 44896390 + chr1 39492140 39492513 5115853 5115853 D NO +NM_028450_Gulp1 chr1 44608366 44896390 + chr1 52625416 52625560 7729026 8017050 U NO +NM_028534_Smap1 chr1 23833022 23929292 - chr1 24609562 24609623 680270 680270 D NO +NM_028534_Smap1 chr1 23833022 23929292 - chr1 24609923 24609992 680631 680631 D NO +NM_028534_Smap1 chr1 23833022 23929292 - chr1 24730996 24731077 801704 801704 D NO +NM_028534_Smap1 chr1 23833022 23929292 - chr1 26734195 26734485 2804903 2804903 D NO +NM_028696_Obfc2a chr1 51417024 51550602 - chr1 52625416 52625560 1074814 1074814 D NO +NM_028696_Obfc2a chr1 51417024 51550602 - chr1 54631692 54631815 3081090 3081090 D NO +NM_028696_Obfc2a chr1 51417024 51550602 - chr1 55283572 55283675 3732970 3732970 D NO +NM_028696_Obfc2a chr1 51417024 51550602 - chr1 44195449 44195639 7221385 7354963 U NO +NM_028713_Rftn2 chr1 55227030 55283748 - chr1 55283572 55283675 0 73 . YES +NM_028713_Rftn2 chr1 55227030 55283748 - chr1 54631692 54631815 595215 651933 U NO +NM_028713_Rftn2 chr1 55227030 55283748 - chr1 52625416 52625560 2601470 2658188 U NO +NM_028713_Rftn2 chr1 55227030 55283748 - chr1 63664888 63665018 8381140 8381140 D NO +NM_028717_Als2 chr1 59219131 59294111 - chr1 55283572 55283675 3935456 4010436 U NO +NM_028717_Als2 chr1 59219131 59294111 - chr1 63664888 63665018 4370777 4370777 D NO +NM_028717_Als2 chr1 59219131 59294111 - chr1 54631692 54631815 4587316 4662296 U NO +NM_028717_Als2 chr1 59219131 59294111 - chr1 52625416 52625560 6593571 6668551 U NO +NM_028749_Npl chr1 155350145 155424001 - chr1 155123313 155123435 226710 300566 U NO +NM_028749_Npl chr1 155350145 155424001 - chr1 154971572 154971673 378472 452328 U NO +NM_028749_Npl chr1 155350145 155424001 - chr1 158510523 158510813 3086522 3086522 D NO +NM_028749_Npl chr1 155350145 155424001 - chr1 158537267 158537411 3113266 3113266 D NO +NM_028776_Scyl3 chr1 165859251 165885242 + chr1 167222964 167223261 1337722 1363713 U NO +NM_028776_Scyl3 chr1 165859251 165885242 + chr1 164215623 164215935 1643316 1643316 D NO +NM_028776_Scyl3 chr1 165859251 165885242 + chr1 163827897 163828062 2031189 2031189 D NO +NM_028776_Scyl3 chr1 165859251 165885242 + chr1 167906284 167906554 2021042 2047033 U NO +NM_028776_Scyl3 chr1 165876143 165924907 - chr1 167222964 167223261 1298057 1298057 D NO +NM_028776_Scyl3 chr1 165876143 165924907 - chr1 164215623 164215935 1660208 1708972 U NO +NM_028776_Scyl3 chr1 165876143 165924907 - chr1 167906284 167906554 1981377 1981377 D NO +NM_028776_Scyl3 chr1 165876143 165924907 - chr1 163827897 163828062 2048081 2096845 U NO +NM_028778_Nuak2 chr1 134212715 134241254 + chr1 133114860 133115015 1097700 1097700 D NO +NM_028778_Nuak2 chr1 134212715 134241254 + chr1 132950929 132951247 1261468 1261468 D NO +NM_028778_Nuak2 chr1 134212715 134241254 + chr1 135582677 135582828 1341423 1369962 U NO +NM_028778_Nuak2 chr1 134212715 134241254 + chr1 135851853 135852218 1610599 1639138 U NO +NM_028787_Slc35f5 chr1 127332249 127554856 + chr1 132950929 132951247 5396073 5618680 U NO +NM_028787_Slc35f5 chr1 127332249 127554856 + chr1 133114860 133115015 5560004 5782611 U NO +NM_028787_Slc35f5 chr1 127332249 127554856 + chr1 120760212 120760461 6571788 6571788 D NO +NM_028787_Slc35f5 chr1 127332249 127554856 + chr1 135582677 135582828 8027821 8250428 U NO +NM_028817_Acsl3 chr1 78654388 78743434 + chr1 78630893 78631160 23228 23228 D NO +NM_028817_Acsl3 chr1 78654388 78743434 + chr1 77457642 77457791 1196597 1196597 D NO +NM_028817_Acsl3 chr1 78654388 78743434 + chr1 75481920 75482054 3172334 3172334 D NO +NM_028817_Acsl3 chr1 78654388 78743434 + chr1 72815517 72815742 5838646 5838646 D NO +NM_028829_Paqr8 chr1 20811519 20929711 + chr1 17030405 17030545 3780974 3780974 D NO +NM_028829_Paqr8 chr1 20811519 20929711 + chr1 24609562 24609623 3679851 3798043 U NO +NM_028829_Paqr8 chr1 20811519 20929711 + chr1 24609923 24609992 3680212 3798404 U NO +NM_028829_Paqr8 chr1 20811519 20929711 + chr1 24730996 24731077 3801285 3919477 U NO +NM_028848_Spata17 chr1 188868366 189039831 - chr1 185854947 185855105 3013261 3184726 U NO +NM_028848_Spata17 chr1 188868366 189039831 - chr1 194258648 194259032 5218817 5218817 D NO +NM_028848_Spata17 chr1 188868366 189039831 - chr1 194645118 194645475 5605287 5605287 D NO +NM_028848_Spata17 chr1 188868366 189039831 - chr1 194957396 194957723 5917565 5917565 D NO +NM_028889_Efhd1 chr1 89160561 89207413 + chr1 88408969 88409267 751294 751294 D NO +NM_028889_Efhd1 chr1 89160561 89207413 + chr1 89989553 89989714 782140 828992 U NO +NM_028889_Efhd1 chr1 89160561 89207413 + chr1 90412932 90413132 1205519 1252371 U NO +NM_028889_Efhd1 chr1 89160561 89207413 + chr1 90592499 90592629 1385086 1431938 U NO +NM_028942_Slco6c1 chr1 98899133 99024880 - chr1 95186508 95186637 3712496 3838243 U NO +NM_028942_Slco6c1 chr1 98899133 99024880 - chr1 92070253 92070431 6828702 6954449 U NO +NM_028942_Slco6c1 chr1 98899133 99024880 - chr1 91496155 91496319 7402814 7528561 U NO +NM_028942_Slco6c1 chr1 98899133 99024880 - chr1 91496003 91496145 7402988 7528735 U NO +NM_029025_Tmem81 chr1 134402623 134405216 + chr1 135582677 135582828 1177461 1180054 U NO +NM_029025_Tmem81 chr1 134402623 134405216 + chr1 133114860 133115015 1287608 1287608 D NO +NM_029025_Tmem81 chr1 134402623 134405216 + chr1 135851853 135852218 1446637 1449230 U NO +NM_029025_Tmem81 chr1 134402623 134405216 + chr1 132950929 132951247 1451376 1451376 D NO +NM_029084_Slamf8 chr1 174510275 174520700 - chr1 174376470 174376659 133616 144041 U NO +NM_029084_Slamf8 chr1 174510275 174520700 - chr1 172620917 172621080 1889195 1899620 U NO +NM_029084_Slamf8 chr1 174510275 174520700 - chr1 172620779 172620912 1889363 1899788 U NO +NM_029084_Slamf8 chr1 174510275 174520700 - chr1 170255081 170255260 4255015 4265440 U NO +NM_029115_4930455F23Rik chr1 166205721 166217973 + chr1 167222964 167223261 1004991 1017243 U NO +NM_029115_4930455F23Rik chr1 166205721 166217973 + chr1 167906284 167906554 1688311 1700563 U NO +NM_029115_4930455F23Rik chr1 166205721 166217973 + chr1 164215623 164215935 1989786 1989786 D NO +NM_029115_4930455F23Rik chr1 166205721 166217973 + chr1 163827897 163828062 2377659 2377659 D NO +NM_029160_Spag16 chr1 69873526 70771706 + chr1 72769824 72770056 1998118 2896298 U NO +NM_029160_Spag16 chr1 69873526 70771706 + chr1 72770058 72770226 1998352 2896532 U NO +NM_029160_Spag16 chr1 69873526 70771706 + chr1 72815517 72815742 2043811 2941991 U NO +NM_029160_Spag16 chr1 69873526 70771706 + chr1 75481920 75482054 4710214 5608394 U NO +NM_029269_Spp2 chr1 90303568 90373213 + chr1 90412932 90413132 39719 109364 U NO +NM_029269_Spp2 chr1 90303568 90373213 + chr1 90592499 90592629 219286 288931 U NO +NM_029269_Spp2 chr1 90303568 90373213 + chr1 89989553 89989714 313854 313854 D NO +NM_029269_Spp2 chr1 90303568 90373213 + chr1 91496003 91496145 1122790 1192435 U NO +NM_029398_Tmem14a chr1 21143538 21220248 + chr1 24609562 24609623 3389314 3466024 U NO +NM_029398_Tmem14a chr1 21143538 21220248 + chr1 24609923 24609992 3389675 3466385 U NO +NM_029398_Tmem14a chr1 21143538 21220248 + chr1 24730996 24731077 3510748 3587458 U NO +NM_029398_Tmem14a chr1 21143538 21220248 + chr1 17030405 17030545 4112993 4112993 D NO +NM_029409_Mff chr1 82721393 82748958 + chr1 78630893 78631160 4090233 4090233 D NO +NM_029409_Mff chr1 82721393 82748958 + chr1 77457642 77457791 5263602 5263602 D NO +NM_029409_Mff chr1 82721393 82748958 + chr1 88408969 88409267 5660011 5687576 U NO +NM_029409_Mff chr1 82721393 82748958 + chr1 75481920 75482054 7239339 7239339 D NO +NM_029612_Slamf9 chr1 174392516 174408706 + chr1 174376470 174376659 15857 15857 D NO +NM_029612_Slamf9 chr1 174392516 174408706 + chr1 172620917 172621080 1771436 1771436 D NO +NM_029612_Slamf9 chr1 174392516 174408706 + chr1 172620779 172620912 1771604 1771604 D NO +NM_029612_Slamf9 chr1 174392516 174408706 + chr1 170255081 170255260 4137256 4137256 D NO +NM_029696_Mdh1b chr1 63745401 63776894 - chr1 63664888 63665018 80383 111876 U NO +NM_029696_Mdh1b chr1 63745401 63776894 - chr1 55283572 55283675 8461726 8493219 U NO +NM_029696_Mdh1b chr1 63745401 63776894 - chr1 72769824 72770056 8992930 8992930 D NO +NM_029696_Mdh1b chr1 63745401 63776894 - chr1 72770058 72770226 8993164 8993164 D NO +NM_029756_Sdccag8 chr1 178743478 178953256 + chr1 181061299 181061446 2108043 2317821 U NO +NM_029756_Sdccag8 chr1 178743478 178953256 + chr1 182479646 182479905 3526390 3736168 U NO +NM_029756_Sdccag8 chr1 178743478 178953256 + chr1 174376470 174376659 4366819 4366819 D NO +NM_029756_Sdccag8 chr1 178743478 178953256 + chr1 172620917 172621080 6122398 6122398 D NO +NM_029766_Dtl chr1 193272523 193399423 - chr1 194258648 194259032 859225 859225 D NO +NM_029766_Dtl chr1 193272523 193399423 - chr1 194645118 194645475 1245695 1245695 D NO +NM_029766_Dtl chr1 193272523 193399423 - chr1 194957396 194957723 1557973 1557973 D NO +NM_029766_Dtl chr1 193272523 193399423 - chr1 195324443 195324741 1925020 1925020 D NO +NM_029846_Atg16l1 chr1 89652465 89697344 + chr1 89989553 89989714 292209 337088 U NO +NM_029846_Atg16l1 chr1 89652465 89697344 + chr1 90412932 90413132 715588 760467 U NO +NM_029846_Atg16l1 chr1 89652465 89697344 + chr1 90592499 90592629 895155 940034 U NO +NM_029846_Atg16l1 chr1 89652465 89697344 + chr1 88408969 88409267 1243198 1243198 D NO +NM_029888_Zfp142 chr1 74612492 74634794 - chr1 75481920 75482054 847126 847126 D NO +NM_029888_Zfp142 chr1 74612492 74634794 - chr1 72815517 72815742 1796750 1819052 U NO +NM_029888_Zfp142 chr1 74612492 74634794 - chr1 72770058 72770226 1842266 1864568 U NO +NM_029888_Zfp142 chr1 74612492 74634794 - chr1 72769824 72770056 1842436 1864738 U NO +NM_030013_Cyp20a1 chr1 60400175 60444904 + chr1 63664888 63665018 3219984 3264713 U NO +NM_030013_Cyp20a1 chr1 60400175 60444904 + chr1 55283572 55283675 5116500 5116500 D NO +NM_030013_Cyp20a1 chr1 60400175 60444904 + chr1 54631692 54631815 5768360 5768360 D NO +NM_030013_Cyp20a1 chr1 60400175 60444904 + chr1 52625416 52625560 7774615 7774615 D NO +NM_030025_Ccdc150 chr1 54251865 54451794 + chr1 54631692 54631815 179898 379827 U NO +NM_030025_Ccdc150 chr1 54251865 54451794 + chr1 55283572 55283675 831778 1031707 U NO +NM_030025_Ccdc150 chr1 54251865 54451794 + chr1 52625416 52625560 1626305 1626305 D NO +NM_030025_Ccdc150 chr1 54251865 54451794 + chr1 63664888 63665018 9213094 9413023 U NO +NM_030060_Batf3 chr1 192921746 192944913 + chr1 194258648 194259032 1313735 1336902 U NO +NM_030060_Batf3 chr1 192921746 192944913 + chr1 194645118 194645475 1700205 1723372 U NO +NM_030060_Batf3 chr1 192921746 192944913 + chr1 194957396 194957723 2012483 2035650 U NO +NM_030060_Batf3 chr1 192921746 192944913 + chr1 195324443 195324741 2379530 2402697 U NO +NM_030131_Cnih4 chr1 183074401 183099213 + chr1 182479646 182479905 594496 594496 D NO +NM_030131_Cnih4 chr1 183074401 183099213 + chr1 181061299 181061446 2012955 2012955 D NO +NM_030131_Cnih4 chr1 183074401 183099213 + chr1 185854947 185855105 2755734 2780546 U NO +NM_030131_Cnih4 chr1 183074401 183099213 + chr1 174376470 174376659 8697742 8697742 D NO +NM_030211_Kctd18 chr1 58007830 58075790 - chr1 55283572 55283675 2724155 2792115 U NO +NM_030211_Kctd18 chr1 58007830 58075790 - chr1 54631692 54631815 3376015 3443975 U NO +NM_030211_Kctd18 chr1 58007830 58075790 - chr1 52625416 52625560 5382270 5450230 U NO +NM_030211_Kctd18 chr1 58007830 58075790 - chr1 63664888 63665018 5589098 5589098 D NO +NM_030245_Tada1l chr1 168309248 168323752 + chr1 167906284 167906554 402694 402694 D NO +NM_030245_Tada1l chr1 168309248 168323752 + chr1 167222964 167223261 1085987 1085987 D NO +NM_030245_Tada1l chr1 168309248 168323752 + chr1 170255081 170255260 1931329 1945833 U NO +NM_030245_Tada1l chr1 168309248 168323752 + chr1 164215623 164215935 4093313 4093313 D NO +NM_030266_Inpp4a chr1 37356703 37476203 + chr1 36106813 36107058 1249645 1249645 D NO +NM_030266_Inpp4a chr1 37356703 37476203 + chr1 39492140 39492513 2015937 2135437 U NO +NM_030266_Inpp4a chr1 37356703 37476203 + chr1 40325917 40326123 2849714 2969214 U NO +NM_030266_Inpp4a chr1 37356703 37476203 + chr1 34206924 34207100 3149603 3149603 D NO +NM_030556_Slc19a3 chr1 83001155 83083196 - chr1 78630893 78631160 4369995 4452036 U NO +NM_030556_Slc19a3 chr1 83001155 83083196 - chr1 88408969 88409267 5325773 5325773 D NO +NM_030556_Slc19a3 chr1 83001155 83083196 - chr1 77457642 77457791 5543364 5625405 U NO +NM_030556_Slc19a3 chr1 83001155 83083196 - chr1 89989553 89989714 6906357 6906357 D NO +NM_030676_Nr5a2 chr1 138739149 138950879 - chr1 138437726 138437860 301289 513019 U NO +NM_030676_Nr5a2 chr1 138739149 138950879 - chr1 140381656 140381785 1430777 1430777 D NO +NM_030676_Nr5a2 chr1 138739149 138950879 - chr1 136956468 136956598 1782551 1994281 U NO +NM_030676_Nr5a2 chr1 138739149 138950879 - chr1 135851853 135852218 2886931 3098661 U NO +NM_030710_Slamf6 chr1 173847613 173932462 + chr1 174376470 174376659 444008 528857 U NO +NM_030710_Slamf6 chr1 173847613 173932462 + chr1 172620917 172621080 1226533 1226533 D NO +NM_030710_Slamf6 chr1 173847613 173932462 + chr1 172620779 172620912 1226701 1226701 D NO +NM_030710_Slamf6 chr1 173847613 173932462 + chr1 170255081 170255260 3592353 3592353 D NO +NM_030724_Uck2 chr1 169106790 169215431 - chr1 170255081 170255260 1039650 1039650 D NO +NM_030724_Uck2 chr1 169106790 169215431 - chr1 167906284 167906554 1200236 1308877 U NO +NM_030724_Uck2 chr1 169106790 169215431 - chr1 167222964 167223261 1883529 1992170 U NO +NM_030724_Uck2 chr1 169106790 169215431 - chr1 172620779 172620912 3405348 3405348 D NO +NM_031164_F13b chr1 141398326 141420329 + chr1 140381656 140381785 1016541 1016541 D NO +NM_031164_F13b chr1 141398326 141420329 + chr1 138437726 138437860 2960466 2960466 D NO +NM_031164_F13b chr1 141398326 141420329 + chr1 145591041 145591176 4170712 4192715 U NO +NM_031164_F13b chr1 141398326 141420329 + chr1 136956468 136956598 4441728 4441728 D NO +NM_031179_Sf3b1 chr1 55042016 55084369 - chr1 55283572 55283675 199203 199203 D NO +NM_031179_Sf3b1 chr1 55042016 55084369 - chr1 54631692 54631815 410201 452554 U NO +NM_031179_Sf3b1 chr1 55042016 55084369 - chr1 52625416 52625560 2416456 2458809 U NO +NM_031179_Sf3b1 chr1 55042016 55084369 - chr1 63664888 63665018 8580519 8580519 D NO +NM_031189_Myog chr1 136186558 136189125 + chr1 135851853 135852218 334340 334340 D NO +NM_031189_Myog chr1 136186558 136189125 + chr1 135582677 135582828 603730 603730 D NO +NM_031189_Myog chr1 136186558 136189125 + chr1 136956468 136956598 767343 769910 U NO +NM_031189_Myog chr1 136186558 136189125 + chr1 138437726 138437860 2248601 2251168 U NO +NM_031192_Ren1 chr1 135246578 135256895 + chr1 135582677 135582828 325782 336099 U NO +NM_031192_Ren1 chr1 135246578 135256895 + chr1 135851853 135852218 594958 605275 U NO +NM_031192_Ren1 chr1 135246578 135256895 + chr1 136956468 136956598 1699573 1709890 U NO +NM_031192_Ren1 chr1 135246578 135256895 + chr1 133114860 133115015 2131563 2131563 D NO +NM_031402_Crispld1 chr1 17717123 17756425 + chr1 17030405 17030545 686578 686578 D NO +NM_031402_Crispld1 chr1 17717123 17756425 + chr1 13829227 13829564 3887559 3887559 D NO +NM_031402_Crispld1 chr1 17717123 17756425 + chr1 24609562 24609623 6853137 6892439 U NO +NM_031402_Crispld1 chr1 17717123 17756425 + chr1 24609923 24609992 6853498 6892800 U NO +NM_032005_Tbx19 chr1 167056323 167090894 - chr1 167222964 167223261 132070 132070 D NO +NM_032005_Tbx19 chr1 167056323 167090894 - chr1 167906284 167906554 815390 815390 D NO +NM_032005_Tbx19 chr1 167056323 167090894 - chr1 164215623 164215935 2840388 2874959 U NO +NM_032005_Tbx19 chr1 167056323 167090894 - chr1 170255081 170255260 3164187 3164187 D NO +NM_033077_D1Pas1 chr1 188791295 188934742 + chr1 185854947 185855105 2936190 2936190 D NO +NM_033077_D1Pas1 chr1 188791295 188934742 + chr1 194258648 194259032 5323906 5467353 U NO +NM_033077_D1Pas1 chr1 188791295 188934742 + chr1 194645118 194645475 5710376 5853823 U NO +NM_033077_D1Pas1 chr1 188791295 188934742 + chr1 194957396 194957723 6022654 6166101 U NO +NM_033509_Vangl2 chr1 173931096 173977129 - chr1 174376470 174376659 399341 399341 D NO +NM_033509_Vangl2 chr1 173931096 173977129 - chr1 172620917 172621080 1310016 1356049 U NO +NM_033509_Vangl2 chr1 173931096 173977129 - chr1 172620779 172620912 1310184 1356217 U NO +NM_033509_Vangl2 chr1 173931096 173977129 - chr1 170255081 170255260 3675836 3721869 U NO +NM_033563_Klf7 chr1 64049920 64169179 - chr1 63664888 63665018 384902 504161 U NO +NM_033563_Klf7 chr1 64049920 64169179 - chr1 72769824 72770056 8600645 8600645 D NO +NM_033563_Klf7 chr1 64049920 64169179 - chr1 72770058 72770226 8600879 8600879 D NO +NM_033563_Klf7 chr1 64049920 64169179 - chr1 72815517 72815742 8646338 8646338 D NO +NM_033570_Cnnm4 chr1 36528452 36565609 + chr1 36106813 36107058 421394 421394 D NO +NM_033570_Cnnm4 chr1 36528452 36565609 + chr1 34206924 34207100 2321352 2321352 D NO +NM_033570_Cnnm4 chr1 36528452 36565609 + chr1 39492140 39492513 2926531 2963688 U NO +NM_033570_Cnnm4 chr1 36528452 36565609 + chr1 40325917 40326123 3760308 3797465 U NO +NM_033608_Igsf9 chr1 174411686 174429005 + chr1 174376470 174376659 35027 35027 D NO +NM_033608_Igsf9 chr1 174411686 174429005 + chr1 172620917 172621080 1790606 1790606 D NO +NM_033608_Igsf9 chr1 174411686 174429005 + chr1 172620779 172620912 1790774 1790774 D NO +NM_033608_Igsf9 chr1 174411686 174429005 + chr1 170255081 170255260 4156426 4156426 D NO +NM_033652_Lmx1a chr1 169579767 169778872 + chr1 170255081 170255260 476209 675314 U NO +NM_033652_Lmx1a chr1 169579767 169778872 + chr1 167906284 167906554 1673213 1673213 D NO +NM_033652_Lmx1a chr1 169579767 169778872 + chr1 167222964 167223261 2356506 2356506 D NO +NM_033652_Lmx1a chr1 169579767 169778872 + chr1 172620779 172620912 2841907 3041012 U NO +NM_053015_Mlph chr1 92811657 92847814 + chr1 92070253 92070431 741226 741226 D NO +NM_053015_Mlph chr1 92811657 92847814 + chr1 91496155 91496319 1315338 1315338 D NO +NM_053015_Mlph chr1 92811657 92847814 + chr1 91496003 91496145 1315512 1315512 D NO +NM_053015_Mlph chr1 92811657 92847814 + chr1 90592499 90592629 2219028 2219028 D NO +NM_053095_Il24 chr1 132778072 132784021 - chr1 132950929 132951247 166908 166908 D NO +NM_053095_Il24 chr1 132778072 132784021 - chr1 133114860 133115015 330839 330839 D NO +NM_053095_Il24 chr1 132778072 132784021 - chr1 135582677 135582828 2798656 2798656 D NO +NM_053095_Il24 chr1 132778072 132784021 - chr1 135851853 135852218 3067832 3067832 D NO +NM_053106_Lmod1 chr1 137221395 137264642 + chr1 136956468 136956598 264797 264797 D NO +NM_053106_Lmod1 chr1 137221395 137264642 + chr1 138437726 138437860 1173084 1216331 U NO +NM_053106_Lmod1 chr1 137221395 137264642 + chr1 135851853 135852218 1369177 1369177 D NO +NM_053106_Lmod1 chr1 137221395 137264642 + chr1 135582677 135582828 1638567 1638567 D NO +NM_053107_Gpr45 chr1 43009719 43092301 + chr1 44195449 44195639 1103148 1185730 U NO +NM_053107_Gpr45 chr1 43009719 43092301 + chr1 40325917 40326123 2683596 2683596 D NO +NM_053107_Gpr45 chr1 43009719 43092301 + chr1 39492140 39492513 3517206 3517206 D NO +NM_053107_Gpr45 chr1 43009719 43092301 + chr1 36106813 36107058 6902661 6902661 D NO +NM_053191_Pi15 chr1 17591992 17621000 + chr1 17030405 17030545 561447 561447 D NO +NM_053191_Pi15 chr1 17591992 17621000 + chr1 13829227 13829564 3762428 3762428 D NO +NM_053191_Pi15 chr1 17591992 17621000 + chr1 10617233 10617437 6974555 6974555 D NO +NM_053191_Pi15 chr1 17591992 17621000 + chr1 24609562 24609623 6988562 7017570 U NO +NM_053199_Cadm3 chr1 175264723 175362523 - chr1 174376470 174376659 888064 985864 U NO +NM_053199_Cadm3 chr1 175264723 175362523 - chr1 172620917 172621080 2643643 2741443 U NO +NM_053199_Cadm3 chr1 175264723 175362523 - chr1 172620779 172620912 2643811 2741611 U NO +NM_053199_Cadm3 chr1 175264723 175362523 - chr1 170255081 170255260 5009463 5107263 U NO +NM_053257_Rpl31 chr1 39421000 39429094 + chr1 39492140 39492513 63046 71140 U NO +NM_053257_Rpl31 chr1 39421000 39429094 + chr1 40325917 40326123 896823 904917 U NO +NM_053257_Rpl31 chr1 39421000 39429094 + chr1 36106813 36107058 3313942 3313942 D NO +NM_053257_Rpl31 chr1 39421000 39429094 + chr1 44195449 44195639 4766355 4774449 U NO +NM_053270_Rims1 chr1 22275987 22813178 - chr1 24609562 24609623 1796384 1796384 D NO +NM_053270_Rims1 chr1 22275987 22813178 - chr1 24609923 24609992 1796745 1796745 D NO +NM_053270_Rims1 chr1 22275987 22813178 - chr1 24730996 24731077 1917818 1917818 D NO +NM_053270_Rims1 chr1 22275987 22813178 - chr1 26734195 26734485 3921017 3921017 D NO +NM_054076_Optc chr1 135787973 135805299 - chr1 135851853 135852218 46554 46554 D NO +NM_054076_Optc chr1 135787973 135805299 - chr1 135582677 135582828 205145 222471 U NO +NM_054076_Optc chr1 135787973 135805299 - chr1 136956468 136956598 1151169 1151169 D NO +NM_054076_Optc chr1 135787973 135805299 - chr1 138437726 138437860 2632427 2632427 D NO +NM_054077_Prelp chr1 135806855 135865173 - chr1 135851853 135852218 0 12955 . YES +NM_054077_Prelp chr1 135806855 135865173 - chr1 135582677 135582828 224027 282345 U NO +NM_054077_Prelp chr1 135806855 135865173 - chr1 136956468 136956598 1091295 1091295 D NO +NM_054077_Prelp chr1 135806855 135865173 - chr1 138437726 138437860 2572553 2572553 D NO +NM_054087_Slc19a2 chr1 166178694 166196022 + chr1 167222964 167223261 1026942 1044270 U NO +NM_054087_Slc19a2 chr1 166178694 166196022 + chr1 167906284 167906554 1710262 1727590 U NO +NM_054087_Slc19a2 chr1 166178694 166196022 + chr1 164215623 164215935 1962759 1962759 D NO +NM_054087_Slc19a2 chr1 166178694 166196022 + chr1 163827897 163828062 2350632 2350632 D NO +NM_054102_Ivns1abp chr1 153196503 153212127 + chr1 154971572 154971673 1759445 1775069 U NO +NM_054102_Ivns1abp chr1 153196503 153212127 + chr1 155123313 155123435 1911186 1926810 U NO +NM_054102_Ivns1abp chr1 153196503 153212127 + chr1 158510523 158510813 5298396 5314020 U NO +NM_054102_Ivns1abp chr1 153196503 153212127 + chr1 158537267 158537411 5325140 5340764 U NO +NM_080419_Igsf8 chr1 174191772 174249967 + chr1 174376470 174376659 126503 184698 U NO +NM_080419_Igsf8 chr1 174191772 174249967 + chr1 172620917 172621080 1570692 1570692 D NO +NM_080419_Igsf8 chr1 174191772 174249967 + chr1 172620779 172620912 1570860 1570860 D NO +NM_080419_Igsf8 chr1 174191772 174249967 + chr1 170255081 170255260 3936512 3936512 D NO +NM_080844_Serpinc1 chr1 162908738 162946004 + chr1 163827897 163828062 881893 919159 U NO +NM_080844_Serpinc1 chr1 162908738 162946004 + chr1 164215623 164215935 1269619 1306885 U NO +NM_080844_Serpinc1 chr1 162908738 162946004 + chr1 159240736 159240866 3667872 3667872 D NO +NM_080844_Serpinc1 chr1 162908738 162946004 + chr1 158835251 158835391 4073347 4073347 D NO +NM_080850_Pask chr1 95205357 95240039 - chr1 95186508 95186637 18720 53402 U NO +NM_080850_Pask chr1 95205357 95240039 - chr1 92070253 92070431 3134926 3169608 U NO +NM_080850_Pask chr1 95205357 95240039 - chr1 91496155 91496319 3709038 3743720 U NO +NM_080850_Pask chr1 95205357 95240039 - chr1 91496003 91496145 3709212 3743894 U NO +NM_130456_Nphs2 chr1 158233397 158258162 + chr1 158510523 158510813 252361 277126 U NO +NM_130456_Nphs2 chr1 158233397 158258162 + chr1 158537267 158537411 279105 303870 U NO +NM_130456_Nphs2 chr1 158233397 158258162 + chr1 158580638 158580759 322476 347241 U NO +NM_130456_Nphs2 chr1 158233397 158258162 + chr1 158835251 158835391 577089 601854 U NO +NM_130890_Capn8 chr1 184489366 184629001 + chr1 185854947 185855105 1225946 1365581 U NO +NM_130890_Capn8 chr1 184489366 184629001 + chr1 182479646 182479905 2009461 2009461 D NO +NM_130890_Capn8 chr1 184489366 184629001 + chr1 181061299 181061446 3427920 3427920 D NO +NM_130890_Capn8 chr1 184489366 184629001 + chr1 194258648 194259032 9629647 9769282 U NO +NM_133193_Il1rl2 chr1 40381454 40447345 + chr1 40325917 40326123 55331 55331 D NO +NM_133193_Il1rl2 chr1 40381454 40447345 + chr1 39492140 39492513 888941 888941 D NO +NM_133193_Il1rl2 chr1 40381454 40447345 + chr1 44195449 44195639 3748104 3813995 U NO +NM_133193_Il1rl2 chr1 40381454 40447345 + chr1 36106813 36107058 4274396 4274396 D NO +NM_133220_Sgk3 chr1 9787936 9890911 + chr1 9619175 9619382 168554 168554 D NO +NM_133220_Sgk3 chr1 9787936 9890911 + chr1 9619046 9619167 168769 168769 D NO +NM_133220_Sgk3 chr1 9787936 9890911 + chr1 10617233 10617437 726322 829297 U NO +NM_133220_Sgk3 chr1 9787936 9890911 + chr1 13829227 13829564 3938316 4041291 U NO +NM_133225_Acbd3 chr1 182654006 182684317 + chr1 182479646 182479905 174101 174101 D NO +NM_133225_Acbd3 chr1 182654006 182684317 + chr1 181061299 181061446 1592560 1592560 D NO +NM_133225_Acbd3 chr1 182654006 182684317 + chr1 185854947 185855105 3170630 3200941 U NO +NM_133225_Acbd3 chr1 182654006 182684317 + chr1 174376470 174376659 8277347 8277347 D NO +NM_133235_Khdrbs2 chr1 32113056 32771277 + chr1 34206924 34207100 1435647 2093868 U NO +NM_133235_Khdrbs2 chr1 32113056 32771277 + chr1 36106813 36107058 3335536 3993757 U NO +NM_133235_Khdrbs2 chr1 32113056 32771277 + chr1 26734195 26734485 5378571 5378571 D NO +NM_133235_Khdrbs2 chr1 32113056 32771277 + chr1 39492140 39492513 6720863 7379084 U NO +NM_133239_Crb1 chr1 141093643 141296750 - chr1 140381656 140381785 711858 914965 U NO +NM_133239_Crb1 chr1 141093643 141296750 - chr1 138437726 138437860 2655783 2858890 U NO +NM_133239_Crb1 chr1 141093643 141296750 - chr1 145591041 145591176 4294291 4294291 D NO +NM_133239_Crb1 chr1 141093643 141296750 - chr1 136956468 136956598 4137045 4340152 U NO +NM_133252_Tram2 chr1 20984161 21069306 - chr1 24609562 24609623 3540256 3540256 D NO +NM_133252_Tram2 chr1 20984161 21069306 - chr1 24609923 24609992 3540617 3540617 D NO +NM_133252_Tram2 chr1 20984161 21069306 - chr1 24730996 24731077 3661690 3661690 D NO +NM_133252_Tram2 chr1 20984161 21069306 - chr1 17030405 17030545 3953616 4038761 U NO +NM_133358_Zfp617 chr1 87909957 87912999 - chr1 88408969 88409267 495970 495970 D NO +NM_133358_Zfp617 chr1 87909957 87912999 - chr1 89989553 89989714 2076554 2076554 D NO +NM_133358_Zfp617 chr1 87909957 87912999 - chr1 90412932 90413132 2499933 2499933 D NO +NM_133358_Zfp617 chr1 87909957 87912999 - chr1 90592499 90592629 2679500 2679500 D NO +NM_133664_Lad1 chr1 137715163 137730085 + chr1 138437726 138437860 707641 722563 U NO +NM_133664_Lad1 chr1 137715163 137730085 + chr1 136956468 136956598 758565 758565 D NO +NM_133664_Lad1 chr1 137715163 137730085 + chr1 135851853 135852218 1862945 1862945 D NO +NM_133664_Lad1 chr1 137715163 137730085 + chr1 135582677 135582828 2132335 2132335 D NO +NM_133684_Mosc2 chr1 186636947 186687141 - chr1 185854947 185855105 781842 832036 U NO +NM_133684_Mosc2 chr1 186636947 186687141 - chr1 182479646 182479905 4157042 4207236 U NO +NM_133684_Mosc2 chr1 186636947 186687141 - chr1 181061299 181061446 5575501 5625695 U NO +NM_133684_Mosc2 chr1 186636947 186687141 - chr1 194258648 194259032 7571507 7571507 D NO +NM_133705_Pycr2 chr1 182834431 182850616 + chr1 182479646 182479905 354526 354526 D NO +NM_133705_Pycr2 chr1 182834431 182850616 + chr1 181061299 181061446 1772985 1772985 D NO +NM_133705_Pycr2 chr1 182834431 182850616 + chr1 185854947 185855105 3004331 3020516 U NO +NM_133705_Pycr2 chr1 182834431 182850616 + chr1 174376470 174376659 8457772 8457772 D NO +NM_133728_Asnsd1 chr1 53382361 53409576 - chr1 52625416 52625560 756801 784016 U NO +NM_133728_Asnsd1 chr1 53382361 53409576 - chr1 54631692 54631815 1222116 1222116 D NO +NM_133728_Asnsd1 chr1 53382361 53409576 - chr1 55283572 55283675 1873996 1873996 D NO +NM_133728_Asnsd1 chr1 53382361 53409576 - chr1 44195449 44195639 9186722 9213937 U NO +NM_133748_Insig2 chr1 123200933 123229157 - chr1 120760212 120760461 2440472 2468696 U NO +NM_133748_Insig2 chr1 123200933 123229157 - chr1 132950929 132951247 9721772 9721772 D NO +NM_133748_Insig2 chr1 123200933 123229157 - chr1 133114860 133115015 9885703 9885703 D NO +NM_133748_Insig2 chr1 123200933 123229157 - chr1 135582677 135582828 12353520 12353520 D NO +NM_133780_Tpr chr1 152239968 152298193 + chr1 154971572 154971673 2673379 2731604 U NO +NM_133780_Tpr chr1 152239968 152298193 + chr1 155123313 155123435 2825120 2883345 U NO +NM_133780_Tpr chr1 152239968 152298193 + chr1 158510523 158510813 6212330 6270555 U NO +NM_133780_Tpr chr1 152239968 152298193 + chr1 158537267 158537411 6239074 6297299 U NO +NM_133781_Cab39 chr1 87687678 87748148 + chr1 88408969 88409267 660821 721291 U NO +NM_133781_Cab39 chr1 87687678 87748148 + chr1 89989553 89989714 2241405 2301875 U NO +NM_133781_Cab39 chr1 87687678 87748148 + chr1 90412932 90413132 2664784 2725254 U NO +NM_133781_Cab39 chr1 87687678 87748148 + chr1 90592499 90592629 2844351 2904821 U NO +NM_133805_Cops8 chr1 92499556 92564446 + chr1 92070253 92070431 429125 429125 D NO +NM_133805_Cops8 chr1 92499556 92564446 + chr1 91496155 91496319 1003237 1003237 D NO +NM_133805_Cops8 chr1 92499556 92564446 + chr1 91496003 91496145 1003411 1003411 D NO +NM_133805_Cops8 chr1 92499556 92564446 + chr1 90592499 90592629 1906927 1906927 D NO +NM_133806_Uap1 chr1 172007106 172105098 - chr1 172620779 172620912 515681 515681 D NO +NM_133806_Uap1 chr1 172007106 172105098 - chr1 172620917 172621080 515819 515819 D NO +NM_133806_Uap1 chr1 172007106 172105098 - chr1 170255081 170255260 1751846 1849838 U NO +NM_133806_Uap1 chr1 172007106 172105098 - chr1 174376470 174376659 2271372 2271372 D NO +NM_133808_Hdlbp chr1 95302520 95375513 - chr1 95186508 95186637 115883 188876 U NO +NM_133808_Hdlbp chr1 95302520 95375513 - chr1 92070253 92070431 3232089 3305082 U NO +NM_133808_Hdlbp chr1 95302520 95375513 - chr1 91496155 91496319 3806201 3879194 U NO +NM_133808_Hdlbp chr1 95302520 95375513 - chr1 91496003 91496145 3806375 3879368 U NO +NM_133809_Kmo chr1 177550532 177592237 + chr1 174376470 174376659 3173873 3173873 D NO +NM_133809_Kmo chr1 177550532 177592237 + chr1 181061299 181061446 3469062 3510767 U NO +NM_133809_Kmo chr1 177550532 177592237 + chr1 182479646 182479905 4887409 4929114 U NO +NM_133809_Kmo chr1 177550532 177592237 + chr1 172620917 172621080 4929452 4929452 D NO +NM_133810_Stk17b chr1 53812356 53857070 - chr1 54631692 54631815 774622 774622 D NO +NM_133810_Stk17b chr1 53812356 53857070 - chr1 52625416 52625560 1186796 1231510 U NO +NM_133810_Stk17b chr1 53812356 53857070 - chr1 55283572 55283675 1426502 1426502 D NO +NM_133810_Stk17b chr1 53812356 53857070 - chr1 44195449 44195639 9616717 9661431 U NO +NM_133815_Lbr chr1 183737722 183773157 - chr1 182479646 182479905 1257817 1293252 U NO +NM_133815_Lbr chr1 183737722 183773157 - chr1 185854947 185855105 2081790 2081790 D NO +NM_133815_Lbr chr1 183737722 183773157 - chr1 181061299 181061446 2676276 2711711 U NO +NM_133815_Lbr chr1 183737722 183773157 - chr1 174376470 174376659 9361063 9396498 U NO +NM_133816_Sh3bp4 chr1 90966984 91051778 + chr1 90592499 90592629 374355 374355 D NO +NM_133816_Sh3bp4 chr1 90966984 91051778 + chr1 91496003 91496145 444225 529019 U NO +NM_133816_Sh3bp4 chr1 90966984 91051778 + chr1 91496155 91496319 444377 529171 U NO +NM_133816_Sh3bp4 chr1 90966984 91051778 + chr1 90412932 90413132 553852 553852 D NO +NM_133817_Zfp451 chr1 33817052 33871530 - chr1 34206924 34207100 335394 335394 D NO +NM_133817_Zfp451 chr1 33817052 33871530 - chr1 36106813 36107058 2235283 2235283 D NO +NM_133817_Zfp451 chr1 33817052 33871530 - chr1 39492140 39492513 5620610 5620610 D NO +NM_133817_Zfp451 chr1 33817052 33871530 - chr1 40325917 40326123 6454387 6454387 D NO +NM_133819_Ppp1r15b chr1 135027595 135036355 + chr1 135582677 135582828 546322 555082 U NO +NM_133819_Ppp1r15b chr1 135027595 135036355 + chr1 135851853 135852218 815498 824258 U NO +NM_133819_Ppp1r15b chr1 135027595 135036355 + chr1 133114860 133115015 1912580 1912580 D NO +NM_133819_Ppp1r15b chr1 135027595 135036355 + chr1 136956468 136956598 1920113 1928873 U NO +NM_133826_Atp6v1h chr1 5060109 5173662 + chr1 9619046 9619167 4445384 4558937 U NO +NM_133826_Atp6v1h chr1 5060109 5173662 + chr1 9619175 9619382 4445513 4559066 U NO +NM_133826_Atp6v1h chr1 5060109 5173662 + chr1 10617233 10617437 5443571 5557124 U NO +NM_133826_Atp6v1h chr1 5060109 5173662 + chr1 13829227 13829564 8655565 8769118 U NO +NM_133828_Creb1 chr1 64579391 64645546 + chr1 63664888 63665018 914373 914373 D NO +NM_133828_Creb1 chr1 64579391 64645546 + chr1 72769824 72770056 8124278 8190433 U NO +NM_133828_Creb1 chr1 64579391 64645546 + chr1 72770058 72770226 8124512 8190667 U NO +NM_133828_Creb1 chr1 64579391 64645546 + chr1 72815517 72815742 8169971 8236126 U NO +NM_133828_Creb1 chr1 64646684 64649524 + chr1 63664888 63665018 981666 981666 D NO +NM_133828_Creb1 chr1 64646684 64649524 + chr1 72769824 72770056 8120300 8123140 U NO +NM_133828_Creb1 chr1 64646684 64649524 + chr1 72770058 72770226 8120534 8123374 U NO +NM_133828_Creb1 chr1 64646684 64649524 + chr1 72815517 72815742 8165993 8168833 U NO +NM_133829_Mfsd6 chr1 52702101 52784383 - chr1 52625416 52625560 76541 158823 U NO +NM_133829_Mfsd6 chr1 52702101 52784383 - chr1 54631692 54631815 1847309 1847309 D NO +NM_133829_Mfsd6 chr1 52702101 52784383 - chr1 55283572 55283675 2499189 2499189 D NO +NM_133829_Mfsd6 chr1 52702101 52784383 - chr1 44195449 44195639 8506462 8588744 U NO +NM_133832_Rdh10 chr1 16095419 16123815 + chr1 17030405 17030545 906590 934986 U NO +NM_133832_Rdh10 chr1 16095419 16123815 + chr1 13829227 13829564 2265855 2265855 D NO +NM_133832_Rdh10 chr1 16095419 16123815 + chr1 10617233 10617437 5477982 5477982 D NO +NM_133832_Rdh10 chr1 16095419 16123815 + chr1 9619175 9619382 6476037 6476037 D NO +NM_133975_Trip12 chr1 84717781 84836834 - chr1 88408969 88409267 3572135 3572135 D NO +NM_133975_Trip12 chr1 84717781 84836834 - chr1 89989553 89989714 5152719 5152719 D NO +NM_133975_Trip12 chr1 84717781 84836834 - chr1 90412932 90413132 5576098 5576098 D NO +NM_133975_Trip12 chr1 84717781 84836834 - chr1 90592499 90592629 5755665 5755665 D NO +NM_134252_Trpm8 chr1 90181363 90285482 + chr1 89989553 89989714 191649 191649 D NO +NM_134252_Trpm8 chr1 90181363 90285482 + chr1 90412932 90413132 127450 231569 U NO +NM_134252_Trpm8 chr1 90181363 90285482 + chr1 90592499 90592629 307017 411136 U NO +NM_134252_Trpm8 chr1 90181363 90285482 + chr1 91496003 91496145 1210521 1314640 U NO +NM_134438_Gpr37l1 chr1 137054243 137069087 - chr1 136956468 136956598 97645 112489 U NO +NM_134438_Gpr37l1 chr1 137054243 137069087 - chr1 135851853 135852218 1202025 1216869 U NO +NM_134438_Gpr37l1 chr1 137054243 137069087 - chr1 138437726 138437860 1368639 1368639 D NO +NM_134438_Gpr37l1 chr1 137054243 137069087 - chr1 135582677 135582828 1471415 1486259 U NO +NM_134448_Dst chr1 33965107 34411632 + chr1 34206924 34207100 0 241817 . YES +NM_134448_Dst chr1 33965107 34411632 + chr1 36106813 36107058 1695181 2141706 U NO +NM_134448_Dst chr1 33965107 34411632 + chr1 39492140 39492513 5080508 5527033 U NO +NM_134448_Dst chr1 33965107 34411632 + chr1 40325917 40326123 5914285 6360810 U NO +NM_138314_Nme7 chr1 166237503 166369483 + chr1 167222964 167223261 853481 985461 U NO +NM_138314_Nme7 chr1 166237503 166369483 + chr1 167906284 167906554 1536801 1668781 U NO +NM_138314_Nme7 chr1 166237503 166369483 + chr1 164215623 164215935 2021568 2021568 D NO +NM_138314_Nme7 chr1 166237503 166369483 + chr1 163827897 163828062 2409441 2409441 D NO +NM_138741_Sdpr chr1 51345970 51359791 + chr1 52625416 52625560 1265625 1279446 U NO +NM_138741_Sdpr chr1 51345970 51359791 + chr1 54631692 54631815 3271901 3285722 U NO +NM_138741_Sdpr chr1 51345970 51359791 + chr1 55283572 55283675 3923781 3937602 U NO +NM_138741_Sdpr chr1 51345970 51359791 + chr1 44195449 44195639 7150331 7150331 D NO +NM_139146_Satb2 chr1 56850830 57044309 - chr1 55283572 55283675 1567155 1760634 U NO +NM_139146_Satb2 chr1 56850830 57044309 - chr1 54631692 54631815 2219015 2412494 U NO +NM_139146_Satb2 chr1 56850830 57044309 - chr1 52625416 52625560 4225270 4418749 U NO +NM_139146_Satb2 chr1 56850830 57044309 - chr1 63664888 63665018 6620579 6620579 D NO +NM_139150_Carf chr1 60155057 60208366 + chr1 63664888 63665018 3456522 3509831 U NO +NM_139150_Carf chr1 60155057 60208366 + chr1 55283572 55283675 4871382 4871382 D NO +NM_139150_Carf chr1 60155057 60208366 + chr1 54631692 54631815 5523242 5523242 D NO +NM_139150_Carf chr1 60155057 60208366 + chr1 52625416 52625560 7529497 7529497 D NO +NM_139152_Asb18 chr1 91849253 91911152 - chr1 92070253 92070431 159101 159101 D NO +NM_139152_Asb18 chr1 91849253 91911152 - chr1 91496155 91496319 352934 414833 U NO +NM_139152_Asb18 chr1 91849253 91911152 - chr1 91496003 91496145 353108 415007 U NO +NM_139152_Asb18 chr1 91849253 91911152 - chr1 90592499 90592629 1256624 1318523 U NO +NM_139270_Pth2r chr1 65328648 65436194 + chr1 63664888 63665018 1663630 1663630 D NO +NM_139270_Pth2r chr1 65328648 65436194 + chr1 72769824 72770056 7333630 7441176 U NO +NM_139270_Pth2r chr1 65328648 65436194 + chr1 72770058 72770226 7333864 7441410 U NO +NM_139270_Pth2r chr1 65328648 65436194 + chr1 72815517 72815742 7379323 7486869 U NO +NM_144530_Zc3h11a chr1 135516445 135557956 - chr1 135582677 135582828 24721 24721 D NO +NM_144530_Zc3h11a chr1 135516445 135557956 - chr1 135851853 135852218 293897 293897 D NO +NM_144530_Zc3h11a chr1 135516445 135557956 - chr1 136956468 136956598 1398512 1398512 D NO +NM_144530_Zc3h11a chr1 135516445 135557956 - chr1 133114860 133115015 2401430 2442941 U NO +NM_144539_Slamf7 chr1 173562534 173583396 - chr1 174376470 174376659 793074 793074 D NO +NM_144539_Slamf7 chr1 173562534 173583396 - chr1 172620917 172621080 941454 962316 U NO +NM_144539_Slamf7 chr1 173562534 173583396 - chr1 172620779 172620912 941622 962484 U NO +NM_144539_Slamf7 chr1 173562534 173583396 - chr1 170255081 170255260 3307274 3328136 U NO +NM_144558_Bivm chr1 44175822 44201615 + chr1 44195449 44195639 0 19627 . YES +NM_144558_Bivm chr1 44175822 44201615 + chr1 40325917 40326123 3849699 3849699 D NO +NM_144558_Bivm chr1 44175822 44201615 + chr1 39492140 39492513 4683309 4683309 D NO +NM_144558_Bivm chr1 44175822 44201615 + chr1 36106813 36107058 8068764 8068764 D NO +NM_144559_Fcgr4 chr1 172925278 172974678 + chr1 172620917 172621080 304198 304198 D NO +NM_144559_Fcgr4 chr1 172925278 172974678 + chr1 172620779 172620912 304366 304366 D NO +NM_144559_Fcgr4 chr1 172925278 172974678 + chr1 174376470 174376659 1401792 1451192 U NO +NM_144559_Fcgr4 chr1 172925278 172974678 + chr1 170255081 170255260 2670018 2670018 D NO +NM_144761_Crygb chr1 65126809 65127141 - chr1 63664888 63665018 1461791 1462123 U NO +NM_144761_Crygb chr1 65126809 65127141 - chr1 72769824 72770056 7642683 7642683 D NO +NM_144761_Crygb chr1 65126809 65127141 - chr1 72770058 72770226 7642917 7642917 D NO +NM_144761_Crygb chr1 65126809 65127141 - chr1 72815517 72815742 7688376 7688376 D NO +NM_144791_Tor1aip1 chr1 157851734 157889804 - chr1 158510523 158510813 620719 620719 D NO +NM_144791_Tor1aip1 chr1 157851734 157889804 - chr1 158537267 158537411 647463 647463 D NO +NM_144791_Tor1aip1 chr1 157851734 157889804 - chr1 158580638 158580759 690834 690834 D NO +NM_144791_Tor1aip1 chr1 157851734 157889804 - chr1 158835251 158835391 945447 945447 D NO +NM_144794_Tmem63a chr1 182872430 182919700 + chr1 182479646 182479905 392525 392525 D NO +NM_144794_Tmem63a chr1 182872430 182919700 + chr1 181061299 181061446 1810984 1810984 D NO +NM_144794_Tmem63a chr1 182872430 182919700 + chr1 185854947 185855105 2935247 2982517 U NO +NM_144794_Tmem63a chr1 182872430 182919700 + chr1 174376470 174376659 8495771 8495771 D NO +NM_144796_Susd4 chr1 184694011 184850523 + chr1 185854947 185855105 1004424 1160936 U NO +NM_144796_Susd4 chr1 184694011 184850523 + chr1 182479646 182479905 2214106 2214106 D NO +NM_144796_Susd4 chr1 184694011 184850523 + chr1 181061299 181061446 3632565 3632565 D NO +NM_144796_Susd4 chr1 184694011 184850523 + chr1 194258648 194259032 9408125 9564637 U NO +NM_144810_Klhdc8a chr1 134182914 134204342 + chr1 133114860 133115015 1067899 1067899 D NO +NM_144810_Klhdc8a chr1 134182914 134204342 + chr1 132950929 132951247 1231667 1231667 D NO +NM_144810_Klhdc8a chr1 134182914 134204342 + chr1 135582677 135582828 1378335 1399763 U NO +NM_144810_Klhdc8a chr1 134182914 134204342 + chr1 135851853 135852218 1647511 1668939 U NO +NM_144814_Rcor3 chr1 193910981 193962565 - chr1 194258648 194259032 296083 296083 D NO +NM_144814_Rcor3 chr1 193910981 193962565 - chr1 194645118 194645475 682553 682553 D NO +NM_144814_Rcor3 chr1 193910981 193962565 - chr1 194957396 194957723 994831 994831 D NO +NM_144814_Rcor3 chr1 193910981 193962565 - chr1 195324443 195324741 1361878 1361878 D NO +NM_144817_Camk1g chr1 195172540 195216632 - chr1 195324443 195324741 107811 107811 D NO +NM_144817_Camk1g chr1 195172540 195216632 - chr1 195330701 195330930 114069 114069 D NO +NM_144817_Camk1g chr1 195172540 195216632 - chr1 195338316 195338616 121684 121684 D NO +NM_144817_Camk1g chr1 195172540 195216632 - chr1 195342728 195342985 126096 126096 D NO +NM_144875_Rab7l1 chr1 133763813 133782396 + chr1 133114860 133115015 648798 648798 D NO +NM_144875_Rab7l1 chr1 133763813 133782396 + chr1 132950929 132951247 812566 812566 D NO +NM_144875_Rab7l1 chr1 133763813 133782396 + chr1 135582677 135582828 1800281 1818864 U NO +NM_144875_Rab7l1 chr1 133763813 133782396 + chr1 135851853 135852218 2069457 2088040 U NO +NM_144877_Mettl13 chr1 164462268 164478659 - chr1 164215623 164215935 246333 262724 U NO +NM_144877_Mettl13 chr1 164462268 164478659 - chr1 163827897 163828062 634206 650597 U NO +NM_144877_Mettl13 chr1 164462268 164478659 - chr1 167222964 167223261 2744305 2744305 D NO +NM_144877_Mettl13 chr1 164462268 164478659 - chr1 167906284 167906554 3427625 3427625 D NO +NM_144878_Fmo4 chr1 164675648 164744002 - chr1 164215623 164215935 459713 528067 U NO +NM_144878_Fmo4 chr1 164675648 164744002 - chr1 163827897 163828062 847586 915940 U NO +NM_144878_Fmo4 chr1 164675648 164744002 - chr1 167222964 167223261 2478962 2478962 D NO +NM_144878_Fmo4 chr1 164675648 164744002 - chr1 167906284 167906554 3162282 3162282 D NO +NM_144879_Vash2 chr1 192771545 192803413 - chr1 194258648 194259032 1455235 1455235 D NO +NM_144879_Vash2 chr1 192771545 192803413 - chr1 194645118 194645475 1841705 1841705 D NO +NM_144879_Vash2 chr1 192771545 192803413 - chr1 194957396 194957723 2153983 2153983 D NO +NM_144879_Vash2 chr1 192771545 192803413 - chr1 195324443 195324741 2521030 2521030 D NO +NM_144880_Ppp2r5a chr1 193175865 193290728 - chr1 194258648 194259032 967920 967920 D NO +NM_144880_Ppp2r5a chr1 193175865 193290728 - chr1 194645118 194645475 1354390 1354390 D NO +NM_144880_Ppp2r5a chr1 193175865 193290728 - chr1 194957396 194957723 1666668 1666668 D NO +NM_144880_Ppp2r5a chr1 193175865 193290728 - chr1 195324443 195324741 2033715 2033715 D NO +NM_144881_Hhat chr1 194320603 194649833 - chr1 194645118 194645475 0 4358 . YES +NM_144881_Hhat chr1 194320603 194649833 - chr1 194957396 194957723 307563 307563 D NO +NM_144881_Hhat chr1 194320603 194649833 - chr1 194258648 194259032 61571 390801 U NO +NM_144881_Hhat chr1 194320603 194649833 - chr1 195324443 195324741 674610 674610 D NO +NM_144882_2810022L02Rik chr1 57831026 58005952 + chr1 55283572 55283675 2547351 2547351 D NO +NM_144882_2810022L02Rik chr1 57831026 58005952 + chr1 54631692 54631815 3199211 3199211 D NO +NM_144882_2810022L02Rik chr1 57831026 58005952 + chr1 52625416 52625560 5205466 5205466 D NO +NM_144882_2810022L02Rik chr1 57831026 58005952 + chr1 63664888 63665018 5658936 5833862 U NO +NM_144953_1700019D03Rik chr1 52981207 53077002 - chr1 52625416 52625560 355647 451442 U NO +NM_144953_1700019D03Rik chr1 52981207 53077002 - chr1 54631692 54631815 1554690 1554690 D NO +NM_144953_1700019D03Rik chr1 52981207 53077002 - chr1 55283572 55283675 2206570 2206570 D NO +NM_144953_1700019D03Rik chr1 52981207 53077002 - chr1 44195449 44195639 8785568 8881363 U NO +NM_144960_Fcamr chr1 132697479 132711317 + chr1 132950929 132951247 239612 253450 U NO +NM_144960_Fcamr chr1 132697479 132711317 + chr1 133114860 133115015 403543 417381 U NO +NM_144960_Fcamr chr1 132697479 132711317 + chr1 135582677 135582828 2871360 2885198 U NO +NM_144960_Fcamr chr1 132697479 132711317 + chr1 135851853 135852218 3140536 3154374 U NO +NM_145100_Lypd1 chr1 127768620 127809650 - chr1 132950929 132951247 5141279 5141279 D NO +NM_145100_Lypd1 chr1 127768620 127809650 - chr1 133114860 133115015 5305210 5305210 D NO +NM_145100_Lypd1 chr1 127768620 127809650 - chr1 120760212 120760461 7008159 7049189 U NO +NM_145100_Lypd1 chr1 127768620 127809650 - chr1 135582677 135582828 7773027 7773027 D NO +NM_145128_Mgat5 chr1 129101583 129384133 + chr1 132950929 132951247 3566796 3849346 U NO +NM_145128_Mgat5 chr1 129101583 129384133 + chr1 133114860 133115015 3730727 4013277 U NO +NM_145128_Mgat5 chr1 129101583 129384133 + chr1 135582677 135582828 6198544 6481094 U NO +NM_145128_Mgat5 chr1 129101583 129384133 + chr1 135851853 135852218 6467720 6750270 U NO +NM_145141_Fcrla chr1 172847725 172857714 - chr1 172620917 172621080 226645 236634 U NO +NM_145141_Fcrla chr1 172847725 172857714 - chr1 172620779 172620912 226813 236802 U NO +NM_145141_Fcrla chr1 172847725 172857714 - chr1 174376470 174376659 1518756 1518756 D NO +NM_145141_Fcrla chr1 172847725 172857714 - chr1 170255081 170255260 2592465 2602454 U NO +NM_145142_Chst10 chr1 38920721 38955057 - chr1 39492140 39492513 537083 537083 D NO +NM_145142_Chst10 chr1 38920721 38955057 - chr1 40325917 40326123 1370860 1370860 D NO +NM_145142_Chst10 chr1 38920721 38955057 - chr1 36106813 36107058 2813663 2847999 U NO +NM_145142_Chst10 chr1 38920721 38955057 - chr1 34206924 34207100 4713621 4747957 U NO +NM_145143_Mpp4 chr1 59177791 59218762 - chr1 55283572 55283675 3894116 3935087 U NO +NM_145143_Mpp4 chr1 59177791 59218762 - chr1 63664888 63665018 4446126 4446126 D NO +NM_145143_Mpp4 chr1 59177791 59218762 - chr1 54631692 54631815 4545976 4586947 U NO +NM_145143_Mpp4 chr1 59177791 59218762 - chr1 52625416 52625560 6552231 6593202 U NO +NM_145222_B3gnt7 chr1 88199427 88203870 + chr1 88408969 88409267 205099 209542 U NO +NM_145222_B3gnt7 chr1 88199427 88203870 + chr1 89989553 89989714 1785683 1790126 U NO +NM_145222_B3gnt7 chr1 88199427 88203870 + chr1 90412932 90413132 2209062 2213505 U NO +NM_145222_B3gnt7 chr1 88199427 88203870 + chr1 90592499 90592629 2388629 2393072 U NO +NM_145381_Lactb2 chr1 13604244 13650616 - chr1 13829227 13829564 178611 178611 D NO +NM_145381_Lactb2 chr1 13604244 13650616 - chr1 10617233 10617437 2986807 3033179 U NO +NM_145381_Lactb2 chr1 13604244 13650616 - chr1 17030405 17030545 3379789 3379789 D NO +NM_145381_Lactb2 chr1 13604244 13650616 - chr1 9619175 9619382 3984862 4031234 U NO +NM_145392_Bag2 chr1 33802345 33814648 - chr1 34206924 34207100 392276 392276 D NO +NM_145392_Bag2 chr1 33802345 33814648 - chr1 36106813 36107058 2292165 2292165 D NO +NM_145392_Bag2 chr1 33802345 33814648 - chr1 39492140 39492513 5677492 5677492 D NO +NM_145392_Bag2 chr1 33802345 33814648 - chr1 40325917 40326123 6511269 6511269 D NO +NM_145413_Fam20b chr1 158608676 158649180 - chr1 158580638 158580759 27917 68421 U NO +NM_145413_Fam20b chr1 158608676 158649180 - chr1 158537267 158537411 71265 111769 U NO +NM_145413_Fam20b chr1 158608676 158649180 - chr1 158510523 158510813 97863 138367 U NO +NM_145413_Fam20b chr1 158608676 158649180 - chr1 158835251 158835391 186071 186071 D NO +NM_145415_AA408296 chr1 194918802 194956446 - chr1 194957396 194957723 950 950 D NO +NM_145415_AA408296 chr1 194918802 194956446 - chr1 194645118 194645475 273327 310971 U NO +NM_145415_AA408296 chr1 194918802 194956446 - chr1 195324443 195324741 367997 367997 D NO +NM_145415_AA408296 chr1 194918802 194956446 - chr1 195330701 195330930 374255 374255 D NO +NM_145417_Rnpep chr1 137159304 137180985 - chr1 136956468 136956598 202706 224387 U NO +NM_145417_Rnpep chr1 137159304 137180985 - chr1 138437726 138437860 1256741 1256741 D NO +NM_145417_Rnpep chr1 137159304 137180985 - chr1 135851853 135852218 1307086 1328767 U NO +NM_145417_Rnpep chr1 137159304 137180985 - chr1 135582677 135582828 1576476 1598157 U NO +NM_145506_Epb4.1l5 chr1 121437741 121545557 - chr1 120760212 120760461 677280 785096 U NO +NM_145506_Epb4.1l5 chr1 121437741 121545557 - chr1 132950929 132951247 11405372 11405372 D NO +NM_145506_Epb4.1l5 chr1 121437741 121545557 - chr1 133114860 133115015 11569303 11569303 D NO +NM_145506_Epb4.1l5 chr1 121437741 121545557 - chr1 108747519 108747791 12689950 12797766 U NO +NM_145508_Dyrk3 chr1 133018921 133034897 - chr1 133114860 133115015 79963 79963 D NO +NM_145508_Dyrk3 chr1 133018921 133034897 - chr1 132950929 132951247 67674 83650 U NO +NM_145508_Dyrk3 chr1 133018921 133034897 - chr1 135582677 135582828 2547780 2547780 D NO +NM_145508_Dyrk3 chr1 133018921 133034897 - chr1 135851853 135852218 2816956 2816956 D NO +NM_145509_5430435G22Rik chr1 133585272 133610099 + chr1 133114860 133115015 470257 470257 D NO +NM_145509_5430435G22Rik chr1 133585272 133610099 + chr1 132950929 132951247 634025 634025 D NO +NM_145509_5430435G22Rik chr1 133585272 133610099 + chr1 135582677 135582828 1972578 1997405 U NO +NM_145509_5430435G22Rik chr1 133585272 133610099 + chr1 135851853 135852218 2241754 2266581 U NO +NM_145510_Rabif chr1 136391105 136405512 + chr1 135851853 135852218 538887 538887 D NO +NM_145510_Rabif chr1 136391105 136405512 + chr1 136956468 136956598 550956 565363 U NO +NM_145510_Rabif chr1 136391105 136405512 + chr1 135582677 135582828 808277 808277 D NO +NM_145510_Rabif chr1 136391105 136405512 + chr1 138437726 138437860 2032214 2046621 U NO +NM_145511_BC003331 chr1 152183263 152240229 - chr1 154971572 154971673 2731343 2731343 D NO +NM_145511_BC003331 chr1 152183263 152240229 - chr1 155123313 155123435 2883084 2883084 D NO +NM_145511_BC003331 chr1 152183263 152240229 - chr1 158510523 158510813 6270294 6270294 D NO +NM_145511_BC003331 chr1 152183263 152240229 - chr1 158537267 158537411 6297038 6297038 D NO +NM_145512_Sft2d2 chr1 167104119 167124549 - chr1 167222964 167223261 98415 98415 D NO +NM_145512_Sft2d2 chr1 167104119 167124549 - chr1 167906284 167906554 781735 781735 D NO +NM_145512_Sft2d2 chr1 167104119 167124549 - chr1 164215623 164215935 2888184 2908614 U NO +NM_145512_Sft2d2 chr1 167104119 167124549 - chr1 170255081 170255260 3130532 3130532 D NO +NM_145513_Tiprl chr1 167133855 167183116 - chr1 167222964 167223261 39848 39848 D NO +NM_145513_Tiprl chr1 167133855 167183116 - chr1 167906284 167906554 723168 723168 D NO +NM_145513_Tiprl chr1 167133855 167183116 - chr1 164215623 164215935 2917920 2967181 U NO +NM_145513_Tiprl chr1 167133855 167183116 - chr1 170255081 170255260 3071965 3071965 D NO +NM_145514_Wdr26 chr1 183100306 183150525 - chr1 182479646 182479905 620401 670620 U NO +NM_145514_Wdr26 chr1 183100306 183150525 - chr1 181061299 181061446 2038860 2089079 U NO +NM_145514_Wdr26 chr1 183100306 183150525 - chr1 185854947 185855105 2704422 2704422 D NO +NM_145514_Wdr26 chr1 183100306 183150525 - chr1 174376470 174376659 8723647 8773866 U NO +NM_145515_Mark1 chr1 186720345 186823408 - chr1 185854947 185855105 865240 968303 U NO +NM_145515_Mark1 chr1 186720345 186823408 - chr1 182479646 182479905 4240440 4343503 U NO +NM_145515_Mark1 chr1 186720345 186823408 - chr1 181061299 181061446 5658899 5761962 U NO +NM_145515_Mark1 chr1 186720345 186823408 - chr1 194258648 194259032 7435240 7435240 D NO +NM_145516_Plekhb2 chr1 34906787 34936422 + chr1 34206924 34207100 699687 699687 D NO +NM_145516_Plekhb2 chr1 34906787 34936422 + chr1 36106813 36107058 1170391 1200026 U NO +NM_145516_Plekhb2 chr1 34906787 34936422 + chr1 39492140 39492513 4555718 4585353 U NO +NM_145516_Plekhb2 chr1 34906787 34936422 + chr1 40325917 40326123 5389495 5419130 U NO +NM_145517_Ormdl1 chr1 53353438 53367153 + chr1 52625416 52625560 727878 727878 D NO +NM_145517_Ormdl1 chr1 53353438 53367153 + chr1 54631692 54631815 1264539 1278254 U NO +NM_145517_Ormdl1 chr1 53353438 53367153 + chr1 55283572 55283675 1916419 1930134 U NO +NM_145517_Ormdl1 chr1 53353438 53367153 + chr1 44195449 44195639 9157799 9157799 D NO +NM_145518_Ndufs1 chr1 63190187 63223454 - chr1 63664888 63665018 441434 441434 D NO +NM_145518_Ndufs1 chr1 63190187 63223454 - chr1 55283572 55283675 7906512 7939779 U NO +NM_145518_Ndufs1 chr1 63190187 63223454 - chr1 54631692 54631815 8558372 8591639 U NO +NM_145518_Ndufs1 chr1 63190187 63223454 - chr1 72769824 72770056 9546370 9546370 D NO +NM_145519_Farp2 chr1 95408676 95518914 + chr1 95186508 95186637 222039 222039 D NO +NM_145519_Farp2 chr1 95408676 95518914 + chr1 92070253 92070431 3338245 3338245 D NO +NM_145519_Farp2 chr1 95408676 95518914 + chr1 91496155 91496319 3912357 3912357 D NO +NM_145519_Farp2 chr1 95408676 95518914 + chr1 91496003 91496145 3912531 3912531 D NO +NM_145624_Zfp709 chr1 87911157 87911749 - chr1 88408969 88409267 497220 497220 D NO +NM_145624_Zfp709 chr1 87911157 87911749 - chr1 89989553 89989714 2077804 2077804 D NO +NM_145624_Zfp709 chr1 87911157 87911749 - chr1 90412932 90413132 2501183 2501183 D NO +NM_145624_Zfp709 chr1 87911157 87911749 - chr1 90592499 90592629 2680750 2680750 D NO +NM_145692_Lrrc67 chr1 9943781 9999420 - chr1 9619175 9619382 324399 380038 U NO +NM_145692_Lrrc67 chr1 9943781 9999420 - chr1 9619046 9619167 324614 380253 U NO +NM_145692_Lrrc67 chr1 9943781 9999420 - chr1 10617233 10617437 617813 617813 D NO +NM_145692_Lrrc67 chr1 9943781 9999420 - chr1 13829227 13829564 3829807 3829807 D NO +NM_145856_Il17f chr1 20767237 20776566 - chr1 17030405 17030545 3736692 3746021 U NO +NM_145856_Il17f chr1 20767237 20776566 - chr1 24609562 24609623 3832996 3832996 D NO +NM_145856_Il17f chr1 20767237 20776566 - chr1 24609923 24609992 3833357 3833357 D NO +NM_145856_Il17f chr1 20767237 20776566 - chr1 24730996 24731077 3954430 3954430 D NO +NM_145977_Slc45a3 chr1 133859512 133879541 + chr1 133114860 133115015 744497 744497 D NO +NM_145977_Slc45a3 chr1 133859512 133879541 + chr1 132950929 132951247 908265 908265 D NO +NM_145977_Slc45a3 chr1 133859512 133879541 + chr1 135582677 135582828 1703136 1723165 U NO +NM_145977_Slc45a3 chr1 133859512 133879541 + chr1 135851853 135852218 1972312 1992341 U NO +NM_145991_Cdc73 chr1 145274292 145549936 - chr1 145591041 145591176 41105 41105 D NO +NM_145991_Cdc73 chr1 145274292 145549936 - chr1 140381656 140381785 4892507 5168151 U NO +NM_145991_Cdc73 chr1 145274292 145549936 - chr1 138437726 138437860 6836432 7112076 U NO +NM_145991_Cdc73 chr1 145274292 145549936 - chr1 136956468 136956598 8317694 8593338 U NO +NM_145996_Arid5a chr1 36359349 36380874 + chr1 36106813 36107058 252291 252291 D NO +NM_145996_Arid5a chr1 36359349 36380874 + chr1 34206924 34207100 2152249 2152249 D NO +NM_145996_Arid5a chr1 36359349 36380874 + chr1 39492140 39492513 3111266 3132791 U NO +NM_145996_Arid5a chr1 36359349 36380874 + chr1 40325917 40326123 3945043 3966568 U NO +NM_146103_Tmem185b chr1 121396063 121425550 + chr1 120760212 120760461 635602 635602 D NO +NM_146103_Tmem185b chr1 121396063 121425550 + chr1 132950929 132951247 11525379 11554866 U NO +NM_146103_Tmem185b chr1 121396063 121425550 + chr1 133114860 133115015 11689310 11718797 U NO +NM_146103_Tmem185b chr1 121396063 121425550 + chr1 108747519 108747791 12648272 12648272 D NO +NM_146106_Lyplal1 chr1 187911630 187941208 - chr1 185854947 185855105 2056525 2086103 U NO +NM_146106_Lyplal1 chr1 187911630 187941208 - chr1 182479646 182479905 5431725 5461303 U NO +NM_146106_Lyplal1 chr1 187911630 187941208 - chr1 194258648 194259032 6317440 6317440 D NO +NM_146106_Lyplal1 chr1 187911630 187941208 - chr1 194645118 194645475 6703910 6703910 D NO +NM_146107_Actr1b chr1 36754975 36766847 - chr1 36106813 36107058 647917 659789 U NO +NM_146107_Actr1b chr1 36754975 36766847 - chr1 34206924 34207100 2547875 2559747 U NO +NM_146107_Actr1b chr1 36754975 36766847 - chr1 39492140 39492513 2725293 2725293 D NO +NM_146107_Actr1b chr1 36754975 36766847 - chr1 40325917 40326123 3559070 3559070 D NO +NM_146108_Hibch chr1 52899113 52977830 + chr1 52625416 52625560 273553 273553 D NO +NM_146108_Hibch chr1 52899113 52977830 + chr1 54631692 54631815 1653862 1732579 U NO +NM_146108_Hibch chr1 52899113 52977830 + chr1 55283572 55283675 2305742 2384459 U NO +NM_146108_Hibch chr1 52899113 52977830 + chr1 44195449 44195639 8703474 8703474 D NO +NM_146110_Aamp chr1 74326421 74331613 - chr1 75481920 75482054 1150307 1150307 D NO +NM_146110_Aamp chr1 74326421 74331613 - chr1 72815517 72815742 1510679 1515871 U NO +NM_146110_Aamp chr1 74326421 74331613 - chr1 72770058 72770226 1556195 1561387 U NO +NM_146110_Aamp chr1 74326421 74331613 - chr1 72769824 72770056 1556365 1561557 U NO +NM_146112_Gigyf2 chr1 89223593 89347370 + chr1 89989553 89989714 642183 765960 U NO +NM_146112_Gigyf2 chr1 89223593 89347370 + chr1 88408969 88409267 814326 814326 D NO +NM_146112_Gigyf2 chr1 89223593 89347370 + chr1 90412932 90413132 1065562 1189339 U NO +NM_146112_Gigyf2 chr1 89223593 89347370 + chr1 90592499 90592629 1245129 1368906 U NO +NM_146250_Gpr1 chr1 63229165 63309823 - chr1 63664888 63665018 355065 355065 D NO +NM_146250_Gpr1 chr1 63229165 63309823 - chr1 55283572 55283675 7945490 8026148 U NO +NM_146250_Gpr1 chr1 63229165 63309823 - chr1 54631692 54631815 8597350 8678008 U NO +NM_146250_Gpr1 chr1 63229165 63309823 - chr1 72769824 72770056 9460001 9460001 D NO +NM_146277_Olfr1412 chr1 94484843 94486082 + chr1 95186508 95186637 700426 701665 U NO +NM_146277_Olfr1412 chr1 94484843 94486082 + chr1 92070253 92070431 2414412 2414412 D NO +NM_146277_Olfr1412 chr1 94484843 94486082 + chr1 91496155 91496319 2988524 2988524 D NO +NM_146277_Olfr1412 chr1 94484843 94486082 + chr1 91496003 91496145 2988698 2988698 D NO +NM_146305_Olfr420 chr1 176088784 176089871 + chr1 174376470 174376659 1712125 1712125 D NO +NM_146305_Olfr420 chr1 176088784 176089871 + chr1 172620917 172621080 3467704 3467704 D NO +NM_146305_Olfr420 chr1 176088784 176089871 + chr1 172620779 172620912 3467872 3467872 D NO +NM_146305_Olfr420 chr1 176088784 176089871 + chr1 181061299 181061446 4971428 4972515 U NO +NM_146490_Olfr1411 chr1 94493008 94494065 + chr1 95186508 95186637 692443 693500 U NO +NM_146490_Olfr1411 chr1 94493008 94494065 + chr1 92070253 92070431 2422577 2422577 D NO +NM_146490_Olfr1411 chr1 94493008 94494065 + chr1 91496155 91496319 2996689 2996689 D NO +NM_146490_Olfr1411 chr1 94493008 94494065 + chr1 91496003 91496145 2996863 2996863 D NO +NM_146491_Olfr1410 chr1 94504416 94505384 + chr1 95186508 95186637 681124 682092 U NO +NM_146491_Olfr1410 chr1 94504416 94505384 + chr1 92070253 92070431 2433985 2433985 D NO +NM_146491_Olfr1410 chr1 94504416 94505384 + chr1 91496155 91496319 3008097 3008097 D NO +NM_146491_Olfr1410 chr1 94504416 94505384 + chr1 91496003 91496145 3008271 3008271 D NO +NM_146715_Olfr419 chr1 176180115 176200418 - chr1 174376470 174376659 1803456 1823759 U NO +NM_146715_Olfr419 chr1 176180115 176200418 - chr1 172620917 172621080 3559035 3579338 U NO +NM_146715_Olfr419 chr1 176180115 176200418 - chr1 172620779 172620912 3559203 3579506 U NO +NM_146715_Olfr419 chr1 176180115 176200418 - chr1 181061299 181061446 4860881 4860881 D NO +NM_146716_Olfr432 chr1 175977437 175981444 + chr1 174376470 174376659 1600778 1600778 D NO +NM_146716_Olfr432 chr1 175977437 175981444 + chr1 172620917 172621080 3356357 3356357 D NO +NM_146716_Olfr432 chr1 175977437 175981444 + chr1 172620779 172620912 3356525 3356525 D NO +NM_146716_Olfr432 chr1 175977437 175981444 + chr1 181061299 181061446 5079855 5083862 U NO +NM_146717_Olfr433 chr1 175971174 175973629 + chr1 174376470 174376659 1594515 1594515 D NO +NM_146717_Olfr433 chr1 175971174 175973629 + chr1 172620917 172621080 3350094 3350094 D NO +NM_146717_Olfr433 chr1 175971174 175973629 + chr1 172620779 172620912 3350262 3350262 D NO +NM_146717_Olfr433 chr1 175971174 175973629 + chr1 181061299 181061446 5087670 5090125 U NO +NM_146718_Olfr430 chr1 175999350 176000384 + chr1 174376470 174376659 1622691 1622691 D NO +NM_146718_Olfr430 chr1 175999350 176000384 + chr1 172620917 172621080 3378270 3378270 D NO +NM_146718_Olfr430 chr1 175999350 176000384 + chr1 172620779 172620912 3378438 3378438 D NO +NM_146718_Olfr430 chr1 175999350 176000384 + chr1 181061299 181061446 5060915 5061949 U NO +NM_146720_Olfr421 chr1 176072364 176082596 + chr1 174376470 174376659 1695705 1695705 D NO +NM_146720_Olfr421 chr1 176072364 176082596 + chr1 172620917 172621080 3451284 3451284 D NO +NM_146720_Olfr421 chr1 176072364 176082596 + chr1 172620779 172620912 3451452 3451452 D NO +NM_146720_Olfr421 chr1 176072364 176082596 + chr1 181061299 181061446 4978703 4988935 U NO +NM_146721_Olfr424 chr1 176057388 176067824 + chr1 174376470 174376659 1680729 1680729 D NO +NM_146721_Olfr424 chr1 176057388 176067824 + chr1 172620917 172621080 3436308 3436308 D NO +NM_146721_Olfr424 chr1 176057388 176067824 + chr1 172620779 172620912 3436476 3436476 D NO +NM_146721_Olfr424 chr1 176057388 176067824 + chr1 181061299 181061446 4993475 5003911 U NO +NM_146722_Olfr429 chr1 176019173 176020111 + chr1 174376470 174376659 1642514 1642514 D NO +NM_146722_Olfr429 chr1 176019173 176020111 + chr1 172620917 172621080 3398093 3398093 D NO +NM_146722_Olfr429 chr1 176019173 176020111 + chr1 172620779 172620912 3398261 3398261 D NO +NM_146722_Olfr429 chr1 176019173 176020111 + chr1 181061299 181061446 5041188 5042126 U NO +NM_146761_Olfr414 chr1 176360513 176361670 + chr1 174376470 174376659 1983854 1983854 D NO +NM_146761_Olfr414 chr1 176360513 176361670 + chr1 172620917 172621080 3739433 3739433 D NO +NM_146761_Olfr414 chr1 176360513 176361670 + chr1 172620779 172620912 3739601 3739601 D NO +NM_146761_Olfr414 chr1 176360513 176361670 + chr1 181061299 181061446 4699629 4700786 U NO +NM_146764_Olfr1408 chr1 175060414 175083388 - chr1 174376470 174376659 683755 706729 U NO +NM_146764_Olfr1408 chr1 175060414 175083388 - chr1 172620917 172621080 2439334 2462308 U NO +NM_146764_Olfr1408 chr1 175060414 175083388 - chr1 172620779 172620912 2439502 2462476 U NO +NM_146764_Olfr1408 chr1 175060414 175083388 - chr1 170255081 170255260 4805154 4828128 U NO +NM_146881_Olfr1404 chr1 175145784 175146725 + chr1 174376470 174376659 769125 769125 D NO +NM_146881_Olfr1404 chr1 175145784 175146725 + chr1 172620917 172621080 2524704 2524704 D NO +NM_146881_Olfr1404 chr1 175145784 175146725 + chr1 172620779 172620912 2524872 2524872 D NO +NM_146881_Olfr1404 chr1 175145784 175146725 + chr1 170255081 170255260 4890524 4890524 D NO +NM_147037_Olfr1413 chr1 94469750 94470721 + chr1 95186508 95186637 715787 716758 U NO +NM_147037_Olfr1413 chr1 94469750 94470721 + chr1 92070253 92070431 2399319 2399319 D NO +NM_147037_Olfr1413 chr1 94469750 94470721 + chr1 91496155 91496319 2973431 2973431 D NO +NM_147037_Olfr1413 chr1 94469750 94470721 + chr1 91496003 91496145 2973605 2973605 D NO +NM_148937_Plcd4 chr1 74589462 74614368 + chr1 75481920 75482054 867552 892458 U NO +NM_148937_Plcd4 chr1 74589462 74614368 + chr1 72815517 72815742 1773720 1773720 D NO +NM_148937_Plcd4 chr1 74589462 74614368 + chr1 72770058 72770226 1819236 1819236 D NO +NM_148937_Plcd4 chr1 74589462 74614368 + chr1 72769824 72770056 1819406 1819406 D NO +NM_152895_Kdm5b chr1 136455975 136529487 + chr1 136956468 136956598 426981 500493 U NO +NM_152895_Kdm5b chr1 136455975 136529487 + chr1 135851853 135852218 603757 603757 D NO +NM_152895_Kdm5b chr1 136455975 136529487 + chr1 135582677 135582828 873147 873147 D NO +NM_152895_Kdm5b chr1 136455975 136529487 + chr1 138437726 138437860 1908239 1981751 U NO +NM_152915_Dner chr1 84366415 84706993 - chr1 88408969 88409267 3701976 3701976 D NO +NM_152915_Dner chr1 84366415 84706993 - chr1 89989553 89989714 5282560 5282560 D NO +NM_152915_Dner chr1 84366415 84706993 - chr1 90412932 90413132 5705939 5705939 D NO +NM_152915_Dner chr1 84366415 84706993 - chr1 90592499 90592629 5885506 5885506 D NO +NM_153064_Ndufs2 chr1 173164989 173180188 - chr1 172620917 172621080 543909 559108 U NO +NM_153064_Ndufs2 chr1 173164989 173180188 - chr1 172620779 172620912 544077 559276 U NO +NM_153064_Ndufs2 chr1 173164989 173180188 - chr1 174376470 174376659 1196282 1196282 D NO +NM_153064_Ndufs2 chr1 173164989 173180188 - chr1 170255081 170255260 2909729 2924928 U NO +NM_153088_Ctdsp1 chr1 74438065 74443852 + chr1 75481920 75482054 1038068 1043855 U NO +NM_153088_Ctdsp1 chr1 74438065 74443852 + chr1 72815517 72815742 1622323 1622323 D NO +NM_153088_Ctdsp1 chr1 74438065 74443852 + chr1 72770058 72770226 1667839 1667839 D NO +NM_153088_Ctdsp1 chr1 74438065 74443852 + chr1 72769824 72770056 1668009 1668009 D NO +NM_153111_Fev chr1 74915158 74932371 - chr1 75481920 75482054 549549 549549 D NO +NM_153111_Fev chr1 74915158 74932371 - chr1 72815517 72815742 2099416 2116629 U NO +NM_153111_Fev chr1 74915158 74932371 - chr1 72770058 72770226 2144932 2162145 U NO +NM_153111_Fev chr1 74915158 74932371 - chr1 72769824 72770056 2145102 2162315 U NO +NM_153114_Otos chr1 94540797 94553072 - chr1 95186508 95186637 633436 633436 D NO +NM_153114_Otos chr1 94540797 94553072 - chr1 92070253 92070431 2470366 2482641 U NO +NM_153114_Otos chr1 94540797 94553072 - chr1 91496155 91496319 3044478 3056753 U NO +NM_153114_Otos chr1 94540797 94553072 - chr1 91496003 91496145 3044652 3056927 U NO +NM_153137_Traf3ip3 chr1 195001656 195027877 - chr1 194957396 194957723 43933 70154 U NO +NM_153137_Traf3ip3 chr1 195001656 195027877 - chr1 195324443 195324741 296566 296566 D NO +NM_153137_Traf3ip3 chr1 195001656 195027877 - chr1 195330701 195330930 302824 302824 D NO +NM_153137_Traf3ip3 chr1 195001656 195027877 - chr1 195338316 195338616 310439 310439 D NO +NM_153154_Tcfap2d chr1 19027377 19157044 + chr1 17030405 17030545 1996832 1996832 D NO +NM_153154_Tcfap2d chr1 19027377 19157044 + chr1 13829227 13829564 5197813 5197813 D NO +NM_153154_Tcfap2d chr1 19027377 19157044 + chr1 24609562 24609623 5452518 5582185 U NO +NM_153154_Tcfap2d chr1 19027377 19157044 + chr1 24609923 24609992 5452879 5582546 U NO +NM_153171_Rgs13 chr1 145985803 146024550 - chr1 145591041 145591176 394627 433374 U NO +NM_153171_Rgs13 chr1 145985803 146024550 - chr1 140381656 140381785 5604018 5642765 U NO +NM_153171_Rgs13 chr1 145985803 146024550 - chr1 138437726 138437860 7547943 7586690 U NO +NM_153171_Rgs13 chr1 145985803 146024550 - chr1 154971572 154971673 8947022 8947022 D NO +NM_153179_Pkhd1 chr1 20040166 20661582 - chr1 17030405 17030545 3009621 3631037 U NO +NM_153179_Pkhd1 chr1 20040166 20661582 - chr1 24609562 24609623 3947980 3947980 D NO +NM_153179_Pkhd1 chr1 20040166 20661582 - chr1 24609923 24609992 3948341 3948341 D NO +NM_153179_Pkhd1 chr1 20040166 20661582 - chr1 24730996 24731077 4069414 4069414 D NO +NM_153408_Neurl3 chr1 36321504 36355139 - chr1 36106813 36107058 214446 248081 U NO +NM_153408_Neurl3 chr1 36321504 36355139 - chr1 34206924 34207100 2114404 2148039 U NO +NM_153408_Neurl3 chr1 36321504 36355139 - chr1 39492140 39492513 3137001 3137001 D NO +NM_153408_Neurl3 chr1 36321504 36355139 - chr1 40325917 40326123 3970778 3970778 D NO +NM_153502_Ankrd23 chr1 36587038 36593708 - chr1 36106813 36107058 479980 486650 U NO +NM_153502_Ankrd23 chr1 36587038 36593708 - chr1 34206924 34207100 2379938 2386608 U NO +NM_153502_Ankrd23 chr1 36587038 36593708 - chr1 39492140 39492513 2898432 2898432 D NO +NM_153502_Ankrd23 chr1 36587038 36593708 - chr1 40325917 40326123 3732209 3732209 D NO +NM_153530_Dis3l2 chr1 88570607 88946671 + chr1 88408969 88409267 161340 161340 D NO +NM_153530_Dis3l2 chr1 88570607 88946671 + chr1 89989553 89989714 1042882 1418946 U NO +NM_153530_Dis3l2 chr1 88570607 88946671 + chr1 90412932 90413132 1466261 1842325 U NO +NM_153530_Dis3l2 chr1 88570607 88946671 + chr1 90592499 90592629 1645828 2021892 U NO +NM_153539_Fam5c chr1 148341910 148749599 + chr1 145591041 145591176 2750734 2750734 D NO +NM_153539_Fam5c chr1 148341910 148749599 + chr1 154971572 154971673 6221973 6629662 U NO +NM_153539_Fam5c chr1 148341910 148749599 + chr1 155123313 155123435 6373714 6781403 U NO +NM_153539_Fam5c chr1 148341910 148749599 + chr1 140381656 140381785 7960125 7960125 D NO +NM_153555_Wdr42a chr1 174078166 174127554 + chr1 174376470 174376659 248916 298304 U NO +NM_153555_Wdr42a chr1 174078166 174127554 + chr1 172620917 172621080 1457086 1457086 D NO +NM_153555_Wdr42a chr1 174078166 174127554 + chr1 172620779 172620912 1457254 1457254 D NO +NM_153555_Wdr42a chr1 174078166 174127554 + chr1 170255081 170255260 3822906 3822906 D NO +NM_153556_Pms1 chr1 53245508 53353841 - chr1 52625416 52625560 619948 728281 U NO +NM_153556_Pms1 chr1 53245508 53353841 - chr1 54631692 54631815 1277851 1277851 D NO +NM_153556_Pms1 chr1 53245508 53353841 - chr1 55283572 55283675 1929731 1929731 D NO +NM_153556_Pms1 chr1 53245508 53353841 - chr1 44195449 44195639 9049869 9158202 U NO +NM_153601_Lgsn chr1 31221394 31261688 + chr1 34206924 34207100 2945236 2985530 U NO +NM_153601_Lgsn chr1 31221394 31261688 + chr1 26734195 26734485 4486909 4486909 D NO +NM_153601_Lgsn chr1 31221394 31261688 + chr1 36106813 36107058 4845125 4885419 U NO +NM_153601_Lgsn chr1 31221394 31261688 + chr1 24730996 24731077 6490317 6490317 D NO +NM_153744_Prkag3 chr1 74785516 74825109 - chr1 75481920 75482054 656811 656811 D NO +NM_153744_Prkag3 chr1 74785516 74825109 - chr1 72815517 72815742 1969774 2009367 U NO +NM_153744_Prkag3 chr1 74785516 74825109 - chr1 72770058 72770226 2015290 2054883 U NO +NM_153744_Prkag3 chr1 74785516 74825109 - chr1 72769824 72770056 2015460 2055053 U NO +NM_153774_Ipo9 chr1 137278207 137330146 - chr1 136956468 136956598 321609 373548 U NO +NM_153774_Ipo9 chr1 137278207 137330146 - chr1 138437726 138437860 1107580 1107580 D NO +NM_153774_Ipo9 chr1 137278207 137330146 - chr1 135851853 135852218 1425989 1477928 U NO +NM_153774_Ipo9 chr1 137278207 137330146 - chr1 135582677 135582828 1695379 1747318 U NO +NM_170597_Creg2 chr1 39677083 39708307 - chr1 39492140 39492513 184570 215794 U NO +NM_170597_Creg2 chr1 39677083 39708307 - chr1 40325917 40326123 617610 617610 D NO +NM_170597_Creg2 chr1 39677083 39708307 - chr1 36106813 36107058 3570025 3601249 U NO +NM_170597_Creg2 chr1 39677083 39708307 - chr1 44195449 44195639 4487142 4487142 D NO +NM_170755_Fam134a chr1 75137484 75144869 + chr1 75481920 75482054 337051 344436 U NO +NM_170755_Fam134a chr1 75137484 75144869 + chr1 77457642 77457791 2312773 2320158 U NO +NM_170755_Fam134a chr1 75137484 75144869 + chr1 72815517 72815742 2321742 2321742 D NO +NM_170755_Fam134a chr1 75137484 75144869 + chr1 72770058 72770226 2367258 2367258 D NO +NM_172054_Txndc9 chr1 38041434 38054101 - chr1 39492140 39492513 1438039 1438039 D NO +NM_172054_Txndc9 chr1 38041434 38054101 - chr1 36106813 36107058 1934376 1947043 U NO +NM_172054_Txndc9 chr1 38041434 38054101 - chr1 40325917 40326123 2271816 2271816 D NO +NM_172054_Txndc9 chr1 38041434 38054101 - chr1 34206924 34207100 3834334 3847001 U NO +NM_172124_B3gat2 chr1 23755411 23855977 + chr1 24609562 24609623 753585 854151 U NO +NM_172124_B3gat2 chr1 23755411 23855977 + chr1 24609923 24609992 753946 854512 U NO +NM_172124_B3gat2 chr1 23755411 23855977 + chr1 24730996 24731077 875019 975585 U NO +NM_172124_B3gat2 chr1 23755411 23855977 + chr1 26734195 26734485 2878218 2978784 U NO +NM_172294_Sulf1 chr1 12708560 12851249 + chr1 13829227 13829564 977978 1120667 U NO +NM_172294_Sulf1 chr1 12708560 12851249 + chr1 10617233 10617437 2091123 2091123 D NO +NM_172294_Sulf1 chr1 12708560 12851249 + chr1 9619175 9619382 3089178 3089178 D NO +NM_172294_Sulf1 chr1 12708560 12851249 + chr1 9619046 9619167 3089393 3089393 D NO +NM_172406_Trak2 chr1 58955979 59031177 - chr1 55283572 55283675 3672304 3747502 U NO +NM_172406_Trak2 chr1 58955979 59031177 - chr1 54631692 54631815 4324164 4399362 U NO +NM_172406_Trak2 chr1 58955979 59031177 - chr1 63664888 63665018 4633711 4633711 D NO +NM_172406_Trak2 chr1 58955979 59031177 - chr1 52625416 52625560 6330419 6405617 U NO +NM_172422_Fastkd2 chr1 63777134 63803028 + chr1 63664888 63665018 112116 112116 D NO +NM_172422_Fastkd2 chr1 63777134 63803028 + chr1 55283572 55283675 8493459 8493459 D NO +NM_172422_Fastkd2 chr1 63777134 63803028 + chr1 72769824 72770056 8966796 8992690 U NO +NM_172422_Fastkd2 chr1 63777134 63803028 + chr1 72770058 72770226 8967030 8992924 U NO +NM_172430_Sphkap chr1 83207585 83404745 - chr1 78630893 78631160 4576425 4773585 U NO +NM_172430_Sphkap chr1 83207585 83404745 - chr1 88408969 88409267 5004224 5004224 D NO +NM_172430_Sphkap chr1 83207585 83404745 - chr1 77457642 77457791 5749794 5946954 U NO +NM_172430_Sphkap chr1 83207585 83404745 - chr1 89989553 89989714 6584808 6584808 D NO +NM_172463_Sned1 chr1 95132418 95197642 + chr1 95186508 95186637 0 54090 . YES +NM_172463_Sned1 chr1 95132418 95197642 + chr1 92070253 92070431 3061987 3061987 D NO +NM_172463_Sned1 chr1 95132418 95197642 + chr1 91496155 91496319 3636099 3636099 D NO +NM_172463_Sned1 chr1 95132418 95197642 + chr1 91496003 91496145 3636273 3636273 D NO +NM_172484_E030049G20Rik chr1 127810213 128389504 - chr1 132950929 132951247 4561425 4561425 D NO +NM_172484_E030049G20Rik chr1 127810213 128389504 - chr1 133114860 133115015 4725356 4725356 D NO +NM_172484_E030049G20Rik chr1 127810213 128389504 - chr1 135582677 135582828 7193173 7193173 D NO +NM_172484_E030049G20Rik chr1 127810213 128389504 - chr1 135851853 135852218 7462349 7462349 D NO +NM_172485_Thsd7b chr1 131169889 132172070 + chr1 132950929 132951247 778859 1781040 U NO +NM_172485_Thsd7b chr1 131169889 132172070 + chr1 133114860 133115015 942790 1944971 U NO +NM_172485_Thsd7b chr1 131169889 132172070 + chr1 135582677 135582828 3410607 4412788 U NO +NM_172485_Thsd7b chr1 131169889 132172070 + chr1 135851853 135852218 3679783 4681964 U NO +NM_172499_Mfsd9 chr1 40828883 40921070 - chr1 40325917 40326123 502760 594947 U NO +NM_172499_Mfsd9 chr1 40828883 40921070 - chr1 39492140 39492513 1336370 1428557 U NO +NM_172499_Mfsd9 chr1 40828883 40921070 - chr1 44195449 44195639 3274379 3274379 D NO +NM_172499_Mfsd9 chr1 40828883 40921070 - chr1 36106813 36107058 4721825 4814012 U NO +NM_172510_Mfsd4 chr1 133919383 133964629 - chr1 133114860 133115015 804368 849614 U NO +NM_172510_Mfsd4 chr1 133919383 133964629 - chr1 132950929 132951247 968136 1013382 U NO +NM_172510_Mfsd4 chr1 133919383 133964629 - chr1 135582677 135582828 1618048 1618048 D NO +NM_172510_Mfsd4 chr1 133919383 133964629 - chr1 135851853 135852218 1887224 1887224 D NO +NM_172513_Fam126b chr1 58575029 58643157 - chr1 55283572 55283675 3291354 3359482 U NO +NM_172513_Fam126b chr1 58575029 58643157 - chr1 54631692 54631815 3943214 4011342 U NO +NM_172513_Fam126b chr1 58575029 58643157 - chr1 63664888 63665018 5021731 5021731 D NO +NM_172513_Fam126b chr1 58575029 58643157 - chr1 52625416 52625560 5949469 6017597 U NO +NM_172516_Dstyk chr1 134314046 134363525 + chr1 133114860 133115015 1199031 1199031 D NO +NM_172516_Dstyk chr1 134314046 134363525 + chr1 135582677 135582828 1219152 1268631 U NO +NM_172516_Dstyk chr1 134314046 134363525 + chr1 132950929 132951247 1362799 1362799 D NO +NM_172516_Dstyk chr1 134314046 134363525 + chr1 135851853 135852218 1488328 1537807 U NO +NM_172517_Rbbp5 chr1 134368568 134402423 + chr1 135582677 135582828 1180254 1214109 U NO +NM_172517_Rbbp5 chr1 134368568 134402423 + chr1 133114860 133115015 1253553 1253553 D NO +NM_172517_Rbbp5 chr1 134368568 134402423 + chr1 132950929 132951247 1417321 1417321 D NO +NM_172517_Rbbp5 chr1 134368568 134402423 + chr1 135851853 135852218 1449430 1483285 U NO +NM_172643_Zbtb41 chr1 141318960 141349577 + chr1 140381656 140381785 937175 937175 D NO +NM_172643_Zbtb41 chr1 141318960 141349577 + chr1 138437726 138437860 2881100 2881100 D NO +NM_172643_Zbtb41 chr1 141318960 141349577 + chr1 145591041 145591176 4241464 4272081 U NO +NM_172643_Zbtb41 chr1 141318960 141349577 + chr1 136956468 136956598 4362362 4362362 D NO +NM_172644_Dars2 chr1 162970732 163001279 - chr1 163827897 163828062 826618 826618 D NO +NM_172644_Dars2 chr1 162970732 163001279 - chr1 164215623 164215935 1214344 1214344 D NO +NM_172644_Dars2 chr1 162970732 163001279 - chr1 159240736 159240866 3729866 3760413 U NO +NM_172644_Dars2 chr1 162970732 163001279 - chr1 158835251 158835391 4135341 4165888 U NO +NM_172647_F11r chr1 173365700 173394971 + chr1 172620917 172621080 744620 744620 D NO +NM_172647_F11r chr1 173365700 173394971 + chr1 172620779 172620912 744788 744788 D NO +NM_172647_F11r chr1 173365700 173394971 + chr1 174376470 174376659 981499 1010770 U NO +NM_172647_F11r chr1 173365700 173394971 + chr1 170255081 170255260 3110440 3110440 D NO +NM_172648_Ifi205 chr1 175664572 175958593 - chr1 174376470 174376659 1287913 1581934 U NO +NM_172648_Ifi205 chr1 175664572 175958593 - chr1 172620917 172621080 3043492 3337513 U NO +NM_172648_Ifi205 chr1 175664572 175958593 - chr1 172620779 172620912 3043660 3337681 U NO +NM_172648_Ifi205 chr1 175664572 175958593 - chr1 181061299 181061446 5102706 5102706 D NO +NM_172650_Kctd3 chr1 190794974 190831710 - chr1 194258648 194259032 3426938 3426938 D NO +NM_172650_Kctd3 chr1 190794974 190831710 - chr1 194645118 194645475 3813408 3813408 D NO +NM_172650_Kctd3 chr1 190794974 190831710 - chr1 194957396 194957723 4125686 4125686 D NO +NM_172650_Kctd3 chr1 190794974 190831710 - chr1 195324443 195324741 4492733 4492733 D NO +NM_172652_4632411B12Rik chr1 36381585 36426026 - chr1 36106813 36107058 274527 318968 U NO +NM_172652_4632411B12Rik chr1 36381585 36426026 - chr1 34206924 34207100 2174485 2218926 U NO +NM_172652_4632411B12Rik chr1 36381585 36426026 - chr1 39492140 39492513 3066114 3066114 D NO +NM_172652_4632411B12Rik chr1 36381585 36426026 - chr1 40325917 40326123 3899891 3899891 D NO +NM_172653_Slc39a10 chr1 46863572 46949677 - chr1 44195449 44195639 2667933 2754038 U NO +NM_172653_Slc39a10 chr1 46863572 46949677 - chr1 52625416 52625560 5675739 5675739 D NO +NM_172653_Slc39a10 chr1 46863572 46949677 - chr1 40325917 40326123 6537449 6623554 U NO +NM_172653_Slc39a10 chr1 46863572 46949677 - chr1 39492140 39492513 7371059 7457164 U NO +NM_172656_Stradb chr1 59012025 59052817 + chr1 55283572 55283675 3728350 3728350 D NO +NM_172656_Stradb chr1 59012025 59052817 + chr1 54631692 54631815 4380210 4380210 D NO +NM_172656_Stradb chr1 59012025 59052817 + chr1 63664888 63665018 4612071 4652863 U NO +NM_172656_Stradb chr1 59012025 59052817 + chr1 52625416 52625560 6386465 6386465 D NO +NM_172841_Slco5a1 chr1 12857471 12982812 - chr1 13829227 13829564 846415 846415 D NO +NM_172841_Slco5a1 chr1 12857471 12982812 - chr1 10617233 10617437 2240034 2365375 U NO +NM_172841_Slco5a1 chr1 12857471 12982812 - chr1 9619175 9619382 3238089 3363430 U NO +NM_172841_Slco5a1 chr1 12857471 12982812 - chr1 9619046 9619167 3238304 3363645 U NO +NM_172843_Tor1aip2 chr1 157906541 157915942 + chr1 158510523 158510813 594581 603982 U NO +NM_172843_Tor1aip2 chr1 157906541 157915942 + chr1 158537267 158537411 621325 630726 U NO +NM_172843_Tor1aip2 chr1 157906541 157915942 + chr1 158580638 158580759 664696 674097 U NO +NM_172843_Tor1aip2 chr1 157906541 157915942 + chr1 158835251 158835391 919309 928710 U NO +NM_172844_Fmo9 chr1 168589849 168611976 - chr1 167906284 167906554 683295 705422 U NO +NM_172844_Fmo9 chr1 168589849 168611976 - chr1 167222964 167223261 1366588 1388715 U NO +NM_172844_Fmo9 chr1 168589849 168611976 - chr1 170255081 170255260 1643105 1643105 D NO +NM_172844_Fmo9 chr1 168589849 168611976 - chr1 172620779 172620912 4008803 4008803 D NO +NM_172845_Adamts4 chr1 173178880 173192383 + chr1 172620917 172621080 557800 557800 D NO +NM_172845_Adamts4 chr1 173178880 173192383 + chr1 172620779 172620912 557968 557968 D NO +NM_172845_Adamts4 chr1 173178880 173192383 + chr1 174376470 174376659 1184087 1197590 U NO +NM_172845_Adamts4 chr1 173178880 173192383 + chr1 170255081 170255260 2923620 2923620 D NO +NM_172846_Dnahc14 chr1 183669052 183694102 + chr1 182479646 182479905 1189147 1189147 D NO +NM_172846_Dnahc14 chr1 183669052 183694102 + chr1 185854947 185855105 2160845 2185895 U NO +NM_172846_Dnahc14 chr1 183669052 183694102 + chr1 181061299 181061446 2607606 2607606 D NO +NM_172846_Dnahc14 chr1 183669052 183694102 + chr1 174376470 174376659 9292393 9292393 D NO +NM_172850_Ankmy1 chr1 94757771 94799473 - chr1 95186508 95186637 387035 387035 D NO +NM_172850_Ankmy1 chr1 94757771 94799473 - chr1 92070253 92070431 2687340 2729042 U NO +NM_172850_Ankmy1 chr1 94757771 94799473 - chr1 91496155 91496319 3261452 3303154 U NO +NM_172850_Ankmy1 chr1 94757771 94799473 - chr1 91496003 91496145 3261626 3303328 U NO +NM_172851_Cntnap5b chr1 101934704 102382815 + chr1 95186508 95186637 6748067 6748067 D NO +NM_172851_Cntnap5b chr1 101934704 102382815 + chr1 108747519 108747791 6364704 6812815 U NO +NM_172851_Cntnap5b chr1 101934704 102382815 + chr1 92070253 92070431 9864273 9864273 D NO +NM_172851_Cntnap5b chr1 101934704 102382815 + chr1 91496155 91496319 10438385 10438385 D NO +NM_172852_Serpinb13 chr1 108877561 108897772 + chr1 108747519 108747791 129770 129770 D NO +NM_172852_Serpinb13 chr1 108877561 108897772 + chr1 120760212 120760461 11862440 11882651 U NO +NM_172852_Serpinb13 chr1 108877561 108897772 + chr1 95186508 95186637 13690924 13690924 D NO +NM_172852_Serpinb13 chr1 108877561 108897772 + chr1 92070253 92070431 16807130 16807130 D NO +NM_172853_Cdh7 chr1 111718165 112036714 + chr1 108747519 108747791 2970374 2970374 D NO +NM_172853_Cdh7 chr1 111718165 112036714 + chr1 120760212 120760461 8723498 9042047 U NO +NM_172853_Cdh7 chr1 111718165 112036714 + chr1 95186508 95186637 16531528 16531528 D NO +NM_172853_Cdh7 chr1 111718165 112036714 + chr1 92070253 92070431 19647734 19647734 D NO +NM_172974_Cops7b chr1 88478926 88503950 + chr1 88408969 88409267 69659 69659 D NO +NM_172974_Cops7b chr1 88478926 88503950 + chr1 89989553 89989714 1485603 1510627 U NO +NM_172974_Cops7b chr1 88478926 88503950 + chr1 90412932 90413132 1908982 1934006 U NO +NM_172974_Cops7b chr1 88478926 88503950 + chr1 90592499 90592629 2088549 2113573 U NO +NM_173029_Adcy10 chr1 167415324 167506904 + chr1 167222964 167223261 192063 192063 D NO +NM_173029_Adcy10 chr1 167415324 167506904 + chr1 167906284 167906554 399380 490960 U NO +NM_173029_Adcy10 chr1 167415324 167506904 + chr1 170255081 170255260 2748177 2839757 U NO +NM_173029_Adcy10 chr1 167415324 167506904 + chr1 164215623 164215935 3199389 3199389 D NO +NM_173187_2310035C23Rik chr1 107560448 107651751 + chr1 108747519 108747791 1095768 1187071 U NO +NM_173187_2310035C23Rik chr1 107560448 107651751 + chr1 95186508 95186637 12373811 12373811 D NO +NM_173187_2310035C23Rik chr1 107560448 107651751 + chr1 120760212 120760461 13108461 13199764 U NO +NM_173187_2310035C23Rik chr1 107560448 107651751 + chr1 92070253 92070431 15490017 15490017 D NO +NM_173378_Trp53bp2 chr1 184333536 184392728 + chr1 185854947 185855105 1462219 1521411 U NO +NM_173378_Trp53bp2 chr1 184333536 184392728 + chr1 182479646 182479905 1853631 1853631 D NO +NM_173378_Trp53bp2 chr1 184333536 184392728 + chr1 181061299 181061446 3272090 3272090 D NO +NM_173378_Trp53bp2 chr1 184333536 184392728 + chr1 194258648 194259032 9865920 9925112 U NO +NM_173395_Fam132b chr1 93263007 93270794 + chr1 92070253 92070431 1192576 1192576 D NO +NM_173395_Fam132b chr1 93263007 93270794 + chr1 91496155 91496319 1766688 1766688 D NO +NM_173395_Fam132b chr1 93263007 93270794 + chr1 91496003 91496145 1766862 1766862 D NO +NM_173395_Fam132b chr1 93263007 93270794 + chr1 95186508 95186637 1915714 1923501 U NO +NM_173424_Zbtb37 chr1 162938038 162965197 - chr1 163827897 163828062 862700 862700 D NO +NM_173424_Zbtb37 chr1 162938038 162965197 - chr1 164215623 164215935 1250426 1250426 D NO +NM_173424_Zbtb37 chr1 162938038 162965197 - chr1 159240736 159240866 3697172 3724331 U NO +NM_173424_Zbtb37 chr1 162938038 162965197 - chr1 158835251 158835391 4102647 4129806 U NO +NM_173425_Fam124b chr1 80156958 80214611 - chr1 78630893 78631160 1525798 1583451 U NO +NM_173425_Fam124b chr1 80156958 80214611 - chr1 77457642 77457791 2699167 2756820 U NO +NM_173425_Fam124b chr1 80156958 80214611 - chr1 75481920 75482054 4674904 4732557 U NO +NM_173425_Fam124b chr1 80156958 80214611 - chr1 72815517 72815742 7341216 7398869 U NO +NM_173437_Nav1 chr1 137332309 137482282 - chr1 136956468 136956598 375711 525684 U NO +NM_173437_Nav1 chr1 137332309 137482282 - chr1 138437726 138437860 955444 955444 D NO +NM_173437_Nav1 chr1 137332309 137482282 - chr1 135851853 135852218 1480091 1630064 U NO +NM_173437_Nav1 chr1 137332309 137482282 - chr1 135582677 135582828 1749481 1899454 U NO +NM_173437_Nav1 chr1 137481360 137496527 + chr1 136956468 136956598 524762 524762 D NO +NM_173437_Nav1 chr1 137481360 137496527 + chr1 138437726 138437860 941199 956366 U NO +NM_173437_Nav1 chr1 137481360 137496527 + chr1 135851853 135852218 1629142 1629142 D NO +NM_173437_Nav1 chr1 137481360 137496527 + chr1 135582677 135582828 1898532 1898532 D NO +NM_173443_Vcpip1 chr1 9709587 9764569 - chr1 9619175 9619382 90205 145187 U NO +NM_173443_Vcpip1 chr1 9709587 9764569 - chr1 9619046 9619167 90420 145402 U NO +NM_173443_Vcpip1 chr1 9709587 9764569 - chr1 10617233 10617437 852664 852664 D NO +NM_173443_Vcpip1 chr1 9709587 9764569 - chr1 13829227 13829564 4064658 4064658 D NO +NM_173760_Hisppd1 chr1 99592475 99667685 - chr1 95186508 95186637 4405838 4481048 U NO +NM_173760_Hisppd1 chr1 99592475 99667685 - chr1 92070253 92070431 7522044 7597254 U NO +NM_173760_Hisppd1 chr1 99592475 99667685 - chr1 91496155 91496319 8096156 8171366 U NO +NM_173760_Hisppd1 chr1 99592475 99667685 - chr1 91496003 91496145 8096330 8171540 U NO +NM_173771_4933406M09Rik chr1 136282517 136287560 + chr1 135851853 135852218 430299 430299 D NO +NM_173771_4933406M09Rik chr1 136282517 136287560 + chr1 136956468 136956598 668908 673951 U NO +NM_173771_4933406M09Rik chr1 136282517 136287560 + chr1 135582677 135582828 699689 699689 D NO +NM_173771_4933406M09Rik chr1 136282517 136287560 + chr1 138437726 138437860 2150166 2155209 U NO +NM_173772_Neu4 chr1 95917070 95928707 + chr1 95186508 95186637 730433 730433 D NO +NM_173772_Neu4 chr1 95917070 95928707 + chr1 92070253 92070431 3846639 3846639 D NO +NM_173772_Neu4 chr1 95917070 95928707 + chr1 91496155 91496319 4420751 4420751 D NO +NM_173772_Neu4 chr1 95917070 95928707 + chr1 91496003 91496145 4420925 4420925 D NO +NM_173865_Slc41a1 chr1 133724090 133745438 + chr1 133114860 133115015 609075 609075 D NO +NM_173865_Slc41a1 chr1 133724090 133745438 + chr1 132950929 132951247 772843 772843 D NO +NM_173865_Slc41a1 chr1 133724090 133745438 + chr1 135582677 135582828 1837239 1858587 U NO +NM_173865_Slc41a1 chr1 133724090 133745438 + chr1 135851853 135852218 2106415 2127763 U NO +NM_173868_St18 chr1 6477297 6885001 + chr1 9619046 9619167 2734045 3141749 U NO +NM_173868_St18 chr1 6477297 6885001 + chr1 9619175 9619382 2734174 3141878 U NO +NM_173868_St18 chr1 6477297 6885001 + chr1 10617233 10617437 3732232 4139936 U NO +NM_173868_St18 chr1 6477297 6885001 + chr1 13829227 13829564 6944226 7351930 U NO +NM_173870_Mgat4a chr1 37496234 37609425 - chr1 36106813 36107058 1389176 1502367 U NO +NM_173870_Mgat4a chr1 37496234 37609425 - chr1 39492140 39492513 1882715 1882715 D NO +NM_173870_Mgat4a chr1 37496234 37609425 - chr1 40325917 40326123 2716492 2716492 D NO +NM_173870_Mgat4a chr1 37496234 37609425 - chr1 34206924 34207100 3289134 3402325 U NO +NM_174874_Atg4b chr1 95648097 95687167 + chr1 95186508 95186637 461460 461460 D NO +NM_174874_Atg4b chr1 95648097 95687167 + chr1 92070253 92070431 3577666 3577666 D NO +NM_174874_Atg4b chr1 95648097 95687167 + chr1 91496155 91496319 4151778 4151778 D NO +NM_174874_Atg4b chr1 95648097 95687167 + chr1 91496003 91496145 4151952 4151952 D NO +NM_174985_Gpbar1 chr1 74321873 74326272 + chr1 75481920 75482054 1155648 1160047 U NO +NM_174985_Gpbar1 chr1 74321873 74326272 + chr1 72815517 72815742 1506131 1506131 D NO +NM_174985_Gpbar1 chr1 74321873 74326272 + chr1 72770058 72770226 1551647 1551647 D NO +NM_174985_Gpbar1 chr1 74321873 74326272 + chr1 72769824 72770056 1551817 1551817 D NO +NM_175031_Stk36 chr1 74648039 74683468 + chr1 75481920 75482054 798452 833881 U NO +NM_175031_Stk36 chr1 74648039 74683468 + chr1 72815517 72815742 1832297 1832297 D NO +NM_175031_Stk36 chr1 74648039 74683468 + chr1 72770058 72770226 1877813 1877813 D NO +NM_175031_Stk36 chr1 74648039 74683468 + chr1 72769824 72770056 1877983 1877983 D NO +NM_175106_Tmem177 chr1 121793019 121809709 - chr1 120760212 120760461 1032558 1049248 U NO +NM_175106_Tmem177 chr1 121793019 121809709 - chr1 132950929 132951247 11141220 11141220 D NO +NM_175106_Tmem177 chr1 121793019 121809709 - chr1 133114860 133115015 11305151 11305151 D NO +NM_175106_Tmem177 chr1 121793019 121809709 - chr1 108747519 108747791 13045228 13061918 U NO +NM_175118_Dusp28 chr1 94803563 94805012 + chr1 95186508 95186637 381496 382945 U NO +NM_175118_Dusp28 chr1 94803563 94805012 + chr1 92070253 92070431 2733132 2733132 D NO +NM_175118_Dusp28 chr1 94803563 94805012 + chr1 91496155 91496319 3307244 3307244 D NO +NM_175118_Dusp28 chr1 94803563 94805012 + chr1 91496003 91496145 3307418 3307418 D NO +NM_175127_Fbxo28 chr1 184242976 184303818 - chr1 185854947 185855105 1551129 1551129 D NO +NM_175127_Fbxo28 chr1 184242976 184303818 - chr1 182479646 182479905 1763071 1823913 U NO +NM_175127_Fbxo28 chr1 184242976 184303818 - chr1 181061299 181061446 3181530 3242372 U NO +NM_175127_Fbxo28 chr1 184242976 184303818 - chr1 174376470 174376659 9866317 9927159 U NO +NM_175170_Pogk chr1 168314763 168391350 - chr1 167906284 167906554 408209 484796 U NO +NM_175170_Pogk chr1 168314763 168391350 - chr1 167222964 167223261 1091502 1168089 U NO +NM_175170_Pogk chr1 168314763 168391350 - chr1 170255081 170255260 1863731 1863731 D NO +NM_175170_Pogk chr1 168314763 168391350 - chr1 164215623 164215935 4098828 4175415 U NO +NM_175200_Als2cr11 chr1 59053967 59151744 - chr1 55283572 55283675 3770292 3868069 U NO +NM_175200_Als2cr11 chr1 59053967 59151744 - chr1 63664888 63665018 4513144 4513144 D NO +NM_175200_Als2cr11 chr1 59053967 59151744 - chr1 54631692 54631815 4422152 4519929 U NO +NM_175200_Als2cr11 chr1 59053967 59151744 - chr1 52625416 52625560 6428407 6526184 U NO +NM_175210_Abca12 chr1 71207671 71501632 - chr1 72769824 72770056 1268192 1268192 D NO +NM_175210_Abca12 chr1 71207671 71501632 - chr1 72770058 72770226 1268426 1268426 D NO +NM_175210_Abca12 chr1 71207671 71501632 - chr1 72815517 72815742 1313885 1313885 D NO +NM_175210_Abca12 chr1 71207671 71501632 - chr1 75481920 75482054 3980288 3980288 D NO +NM_175236_Adhfe1 chr1 9538049 9570746 + chr1 9619046 9619167 48300 80997 U NO +NM_175236_Adhfe1 chr1 9538049 9570746 + chr1 9619175 9619382 48429 81126 U NO +NM_175236_Adhfe1 chr1 9538049 9570746 + chr1 10617233 10617437 1046487 1079184 U NO +NM_175236_Adhfe1 chr1 9538049 9570746 + chr1 13829227 13829564 4258481 4291178 U NO +NM_175259_Shisa4 chr1 137267654 137274885 - chr1 136956468 136956598 311056 318287 U NO +NM_175259_Shisa4 chr1 137267654 137274885 - chr1 138437726 138437860 1162841 1162841 D NO +NM_175259_Shisa4 chr1 137267654 137274885 - chr1 135851853 135852218 1415436 1422667 U NO +NM_175259_Shisa4 chr1 137267654 137274885 - chr1 135582677 135582828 1684826 1692057 U NO +NM_175293_D630023F18Rik chr1 65151863 65176420 - chr1 63664888 63665018 1486845 1511402 U NO +NM_175293_D630023F18Rik chr1 65151863 65176420 - chr1 72769824 72770056 7593404 7593404 D NO +NM_175293_D630023F18Rik chr1 65151863 65176420 - chr1 72770058 72770226 7593638 7593638 D NO +NM_175293_D630023F18Rik chr1 65151863 65176420 - chr1 72815517 72815742 7639097 7639097 D NO +NM_175294_Nucks1 chr1 133807079 133832888 + chr1 133114860 133115015 692064 692064 D NO +NM_175294_Nucks1 chr1 133807079 133832888 + chr1 132950929 132951247 855832 855832 D NO +NM_175294_Nucks1 chr1 133807079 133832888 + chr1 135582677 135582828 1749789 1775598 U NO +NM_175294_Nucks1 chr1 133807079 133832888 + chr1 135851853 135852218 2018965 2044774 U NO +NM_175296_Mael chr1 168115771 168178081 - chr1 167906284 167906554 209217 271527 U NO +NM_175296_Mael chr1 168115771 168178081 - chr1 167222964 167223261 892510 954820 U NO +NM_175296_Mael chr1 168115771 168178081 - chr1 170255081 170255260 2077000 2077000 D NO +NM_175296_Mael chr1 168115771 168178081 - chr1 164215623 164215935 3899836 3962146 U NO +NM_175370_Als2cr12 chr1 58714975 58752801 - chr1 55283572 55283675 3431300 3469126 U NO +NM_175370_Als2cr12 chr1 58714975 58752801 - chr1 54631692 54631815 4083160 4120986 U NO +NM_175370_Als2cr12 chr1 58714975 58752801 - chr1 63664888 63665018 4912087 4912087 D NO +NM_175370_Als2cr12 chr1 58714975 58752801 - chr1 52625416 52625560 6089415 6127241 U NO +NM_175382_2700049P18Rik chr1 133344141 133436449 + chr1 133114860 133115015 229126 229126 D NO +NM_175382_2700049P18Rik chr1 133344141 133436449 + chr1 132950929 132951247 392894 392894 D NO +NM_175382_2700049P18Rik chr1 133344141 133436449 + chr1 135582677 135582828 2146228 2238536 U NO +NM_175382_2700049P18Rik chr1 133344141 133436449 + chr1 135851853 135852218 2415404 2507712 U NO +NM_175439_Mars2 chr1 55294084 55297625 + chr1 55283572 55283675 10409 10409 D NO +NM_175439_Mars2 chr1 55294084 55297625 + chr1 54631692 54631815 662269 662269 D NO +NM_175439_Mars2 chr1 55294084 55297625 + chr1 52625416 52625560 2668524 2668524 D NO +NM_175439_Mars2 chr1 55294084 55297625 + chr1 63664888 63665018 8367263 8370804 U NO +NM_175443_Etnk2 chr1 135260167 135276893 + chr1 135582677 135582828 305784 322510 U NO +NM_175443_Etnk2 chr1 135260167 135276893 + chr1 135851853 135852218 574960 591686 U NO +NM_175443_Etnk2 chr1 135260167 135276893 + chr1 136956468 136956598 1679575 1696301 U NO +NM_175443_Etnk2 chr1 135260167 135276893 + chr1 133114860 133115015 2145152 2145152 D NO +NM_175460_Nmnat2 chr1 154802128 154966391 + chr1 154971572 154971673 5181 169444 U NO +NM_175460_Nmnat2 chr1 154802128 154966391 + chr1 155123313 155123435 156922 321185 U NO +NM_175460_Nmnat2 chr1 154802128 154966391 + chr1 158510523 158510813 3544132 3708395 U NO +NM_175460_Nmnat2 chr1 154802128 154966391 + chr1 158537267 158537411 3570876 3735139 U NO +NM_175461_Fam78b chr1 168898096 169021408 + chr1 167906284 167906554 991542 991542 D NO +NM_175461_Fam78b chr1 168898096 169021408 + chr1 170255081 170255260 1233673 1356985 U NO +NM_175461_Fam78b chr1 168898096 169021408 + chr1 167222964 167223261 1674835 1674835 D NO +NM_175461_Fam78b chr1 168898096 169021408 + chr1 172620779 172620912 3599371 3722683 U NO +NM_175564_Tmem169 chr1 72330953 72349677 + chr1 72769824 72770056 420147 438871 U NO +NM_175564_Tmem169 chr1 72330953 72349677 + chr1 72770058 72770226 420381 439105 U NO +NM_175564_Tmem169 chr1 72330953 72349677 + chr1 72815517 72815742 465840 484564 U NO +NM_175564_Tmem169 chr1 72330953 72349677 + chr1 75481920 75482054 3132243 3150967 U NO +NM_175642_Bai3 chr1 25084207 25887514 - chr1 26734195 26734485 846681 846681 D NO +NM_175642_Bai3 chr1 25084207 25887514 - chr1 24730996 24731077 353130 1156437 U NO +NM_175642_Bai3 chr1 25084207 25887514 - chr1 24609923 24609992 474215 1277522 U NO +NM_175642_Bai3 chr1 25084207 25887514 - chr1 24609562 24609623 474584 1277891 U NO +NM_175686_Prrx1 chr1 165175252 165245859 - chr1 164215623 164215935 959317 1029924 U NO +NM_175686_Prrx1 chr1 165175252 165245859 - chr1 163827897 163828062 1347190 1417797 U NO +NM_175686_Prrx1 chr1 165175252 165245859 - chr1 167222964 167223261 1977105 1977105 D NO +NM_175686_Prrx1 chr1 165175252 165245859 - chr1 167906284 167906554 2660425 2660425 D NO +NM_176916_Pld5 chr1 177892457 178205403 - chr1 181061299 181061446 2855896 2855896 D NO +NM_176916_Pld5 chr1 177892457 178205403 - chr1 174376470 174376659 3515798 3828744 U NO +NM_176916_Pld5 chr1 177892457 178205403 - chr1 182479646 182479905 4274243 4274243 D NO +NM_176916_Pld5 chr1 177892457 178205403 - chr1 172620917 172621080 5271377 5584323 U NO +NM_176972_Usp37 chr1 74482084 74590860 - chr1 75481920 75482054 891060 891060 D NO +NM_176972_Usp37 chr1 74482084 74590860 - chr1 72815517 72815742 1666342 1775118 U NO +NM_176972_Usp37 chr1 74482084 74590860 - chr1 72770058 72770226 1711858 1820634 U NO +NM_176972_Usp37 chr1 74482084 74590860 - chr1 72769824 72770056 1712028 1820804 U NO +NM_176980_Ankar chr1 72689581 72747143 - chr1 72769824 72770056 22681 22681 D NO +NM_176980_Ankar chr1 72689581 72747143 - chr1 72770058 72770226 22915 22915 D NO +NM_176980_Ankar chr1 72689581 72747143 - chr1 72815517 72815742 68374 68374 D NO +NM_176980_Ankar chr1 72689581 72747143 - chr1 75481920 75482054 2734777 2734777 D NO +NM_177068_Olfml2b chr1 172569075 172612915 + chr1 172620779 172620912 7864 51704 U NO +NM_177068_Olfml2b chr1 172569075 172612915 + chr1 172620917 172621080 8002 51842 U NO +NM_177068_Olfml2b chr1 172569075 172612915 + chr1 174376470 174376659 1763555 1807395 U NO +NM_177068_Olfml2b chr1 172569075 172612915 + chr1 170255081 170255260 2313815 2313815 D NO +NM_177084_Slc9a4 chr1 40636956 40687551 + chr1 40325917 40326123 310833 310833 D NO +NM_177084_Slc9a4 chr1 40636956 40687551 + chr1 39492140 39492513 1144443 1144443 D NO +NM_177084_Slc9a4 chr1 40636956 40687551 + chr1 44195449 44195639 3507898 3558493 U NO +NM_177084_Slc9a4 chr1 40636956 40687551 + chr1 36106813 36107058 4529898 4529898 D NO +NM_177129_Cntn2 chr1 134406005 134442705 - chr1 135582677 135582828 1139972 1139972 D NO +NM_177129_Cntn2 chr1 134406005 134442705 - chr1 133114860 133115015 1290990 1327690 U NO +NM_177129_Cntn2 chr1 134406005 134442705 - chr1 135851853 135852218 1409148 1409148 D NO +NM_177129_Cntn2 chr1 134406005 134442705 - chr1 132950929 132951247 1454758 1491458 U NO +NM_177164_A830006F12Rik chr1 70772309 70929065 + chr1 72769824 72770056 1840759 1997515 U NO +NM_177164_A830006F12Rik chr1 70772309 70929065 + chr1 72770058 72770226 1840993 1997749 U NO +NM_177164_A830006F12Rik chr1 70772309 70929065 + chr1 72815517 72815742 1886452 2043208 U NO +NM_177164_A830006F12Rik chr1 70772309 70929065 + chr1 75481920 75482054 4552855 4709611 U NO +NM_177173_A830018L16Rik chr1 11404178 11994163 + chr1 10617233 10617437 786741 786741 D NO +NM_177173_A830018L16Rik chr1 11404178 11994163 + chr1 9619175 9619382 1784796 1784796 D NO +NM_177173_A830018L16Rik chr1 11404178 11994163 + chr1 9619046 9619167 1785011 1785011 D NO +NM_177173_A830018L16Rik chr1 11404178 11994163 + chr1 13829227 13829564 1835064 2425049 U NO +NM_177235_Bend6 chr1 33903283 33964764 - chr1 34206924 34207100 242160 242160 D NO +NM_177235_Bend6 chr1 33903283 33964764 - chr1 36106813 36107058 2142049 2142049 D NO +NM_177235_Bend6 chr1 33903283 33964764 - chr1 39492140 39492513 5527376 5527376 D NO +NM_177235_Bend6 chr1 33903283 33964764 - chr1 40325917 40326123 6361153 6361153 D NO +NM_177243_Slc26a9 chr1 133640599 133668075 + chr1 133114860 133115015 525584 525584 D NO +NM_177243_Slc26a9 chr1 133640599 133668075 + chr1 132950929 132951247 689352 689352 D NO +NM_177243_Slc26a9 chr1 133640599 133668075 + chr1 135582677 135582828 1914602 1942078 U NO +NM_177243_Slc26a9 chr1 133640599 133668075 + chr1 135851853 135852218 2183778 2211254 U NO +NM_177305_Arl4c chr1 90569702 90617572 - chr1 90592499 90592629 0 24943 . YES +NM_177305_Arl4c chr1 90569702 90617572 - chr1 90412932 90413132 156570 204440 U NO +NM_177305_Arl4c chr1 90569702 90617572 - chr1 89989553 89989714 579988 627858 U NO +NM_177305_Arl4c chr1 90569702 90617572 - chr1 91496003 91496145 878431 878431 D NO +NM_177397_Atp6v1g3 chr1 140120875 140186039 + chr1 140381656 140381785 195617 260781 U NO +NM_177397_Atp6v1g3 chr1 140120875 140186039 + chr1 138437726 138437860 1683015 1683015 D NO +NM_177397_Atp6v1g3 chr1 140120875 140186039 + chr1 136956468 136956598 3164277 3164277 D NO +NM_177397_Atp6v1g3 chr1 140120875 140186039 + chr1 135851853 135852218 4268657 4268657 D NO +NM_177445_Dars chr1 130260284 130314013 - chr1 132950929 132951247 2636916 2636916 D NO +NM_177445_Dars chr1 130260284 130314013 - chr1 133114860 133115015 2800847 2800847 D NO +NM_177445_Dars chr1 130260284 130314013 - chr1 135582677 135582828 5268664 5268664 D NO +NM_177445_Dars chr1 130260284 130314013 - chr1 135851853 135852218 5537840 5537840 D NO +NM_177587_Aqp12 chr1 94886487 94908846 + chr1 95186508 95186637 277662 300021 U NO +NM_177587_Aqp12 chr1 94886487 94908846 + chr1 92070253 92070431 2816056 2816056 D NO +NM_177587_Aqp12 chr1 94886487 94908846 + chr1 91496155 91496319 3390168 3390168 D NO +NM_177587_Aqp12 chr1 94886487 94908846 + chr1 91496003 91496145 3390342 3390342 D NO +NM_177604_AA986860 chr1 132628563 132644539 + chr1 132950929 132951247 306390 322366 U NO +NM_177604_AA986860 chr1 132628563 132644539 + chr1 133114860 133115015 470321 486297 U NO +NM_177604_AA986860 chr1 132628563 132644539 + chr1 135582677 135582828 2938138 2954114 U NO +NM_177604_AA986860 chr1 132628563 132644539 + chr1 135851853 135852218 3207314 3223290 U NO +NM_177643_Zfp281 chr1 138487073 138526617 + chr1 138437726 138437860 49213 49213 D NO +NM_177643_Zfp281 chr1 138487073 138526617 + chr1 136956468 136956598 1530475 1530475 D NO +NM_177643_Zfp281 chr1 138487073 138526617 + chr1 140381656 140381785 1855039 1894583 U NO +NM_177643_Zfp281 chr1 138487073 138526617 + chr1 135851853 135852218 2634855 2634855 D NO +NM_177646_Dgkd chr1 89749836 89841946 + chr1 89989553 89989714 147607 239717 U NO +NM_177646_Dgkd chr1 89749836 89841946 + chr1 90412932 90413132 570986 663096 U NO +NM_177646_Dgkd chr1 89749836 89841946 + chr1 90592499 90592629 750553 842663 U NO +NM_177646_Dgkd chr1 89749836 89841946 + chr1 88408969 88409267 1340569 1340569 D NO +NM_177722_6030422M02Rik chr1 9898713 9932156 + chr1 9619175 9619382 279331 279331 D NO +NM_177722_6030422M02Rik chr1 9898713 9932156 + chr1 9619046 9619167 279546 279546 D NO +NM_177722_6030422M02Rik chr1 9898713 9932156 + chr1 10617233 10617437 685077 718520 U NO +NM_177722_6030422M02Rik chr1 9898713 9932156 + chr1 13829227 13829564 3897071 3930514 U NO +NM_177723_Vsig8 chr1 174486069 174513273 + chr1 174376470 174376659 109410 109410 D NO +NM_177723_Vsig8 chr1 174486069 174513273 + chr1 172620917 172621080 1864989 1864989 D NO +NM_177723_Vsig8 chr1 174486069 174513273 + chr1 172620779 172620912 1865157 1865157 D NO +NM_177723_Vsig8 chr1 174486069 174513273 + chr1 170255081 170255260 4230809 4230809 D NO +NM_177724_D230039L06Rik chr1 180426979 180686112 + chr1 181061299 181061446 375187 634320 U NO +NM_177724_D230039L06Rik chr1 180426979 180686112 + chr1 182479646 182479905 1793534 2052667 U NO +NM_177724_D230039L06Rik chr1 180426979 180686112 + chr1 185854947 185855105 5168835 5427968 U NO +NM_177724_D230039L06Rik chr1 180426979 180686112 + chr1 174376470 174376659 6050320 6050320 D NO +NM_177756_Glt25d2 chr1 154223175 154357825 + chr1 154971572 154971673 613747 748397 U NO +NM_177756_Glt25d2 chr1 154223175 154357825 + chr1 155123313 155123435 765488 900138 U NO +NM_177756_Glt25d2 chr1 154223175 154357825 + chr1 158510523 158510813 4152698 4287348 U NO +NM_177756_Glt25d2 chr1 154223175 154357825 + chr1 158537267 158537411 4179442 4314092 U NO +NM_177757_Kif26b chr1 180720593 180862983 + chr1 181061299 181061446 198316 340706 U NO +NM_177757_Kif26b chr1 180720593 180862983 + chr1 182479646 182479905 1616663 1759053 U NO +NM_177757_Kif26b chr1 180720593 180862983 + chr1 185854947 185855105 4991964 5134354 U NO +NM_177757_Kif26b chr1 180720593 180862983 + chr1 174376470 174376659 6343934 6343934 D NO +NM_177781_Trpa1 chr1 14861962 14909072 - chr1 13829227 13829564 1032398 1079508 U NO +NM_177781_Trpa1 chr1 14861962 14909072 - chr1 17030405 17030545 2121333 2121333 D NO +NM_177781_Trpa1 chr1 14861962 14909072 - chr1 10617233 10617437 4244525 4291635 U NO +NM_177781_Trpa1 chr1 14861962 14909072 - chr1 9619175 9619382 5242580 5289690 U NO +NM_177834_Cpa6 chr1 10314801 10710026 - chr1 10617233 10617437 0 92589 . YES +NM_177834_Cpa6 chr1 10314801 10710026 - chr1 9619175 9619382 695419 1090644 U NO +NM_177834_Cpa6 chr1 10314801 10710026 - chr1 9619046 9619167 695634 1090859 U NO +NM_177834_Cpa6 chr1 10314801 10710026 - chr1 13829227 13829564 3119201 3119201 D NO +NM_177838_Fam163a chr1 157923096 158135544 - chr1 158510523 158510813 374979 374979 D NO +NM_177838_Fam163a chr1 157923096 158135544 - chr1 158537267 158537411 401723 401723 D NO +NM_177838_Fam163a chr1 157923096 158135544 - chr1 158580638 158580759 445094 445094 D NO +NM_177838_Fam163a chr1 157923096 158135544 - chr1 158835251 158835391 699707 699707 D NO +NM_177839_Tnn chr1 161966935 162084477 - chr1 163827897 163828062 1743420 1743420 D NO +NM_177839_Tnn chr1 161966935 162084477 - chr1 164215623 164215935 2131146 2131146 D NO +NM_177839_Tnn chr1 161966935 162084477 - chr1 159240736 159240866 2726069 2843611 U NO +NM_177839_Tnn chr1 161966935 162084477 - chr1 158835251 158835391 3131544 3249086 U NO +NM_178051_Mterfd2 chr1 95195779 95202630 - chr1 95186508 95186637 9142 15993 U NO +NM_178051_Mterfd2 chr1 95195779 95202630 - chr1 92070253 92070431 3125348 3132199 U NO +NM_178051_Mterfd2 chr1 95195779 95202630 - chr1 91496155 91496319 3699460 3706311 U NO +NM_178051_Mterfd2 chr1 95195779 95202630 - chr1 91496003 91496145 3699634 3706485 U NO +NM_178055_Dnajb2 chr1 75233016 75242264 + chr1 75481920 75482054 239656 248904 U NO +NM_178055_Dnajb2 chr1 75233016 75242264 + chr1 77457642 77457791 2215378 2224626 U NO +NM_178055_Dnajb2 chr1 75233016 75242264 + chr1 72815517 72815742 2417274 2417274 D NO +NM_178055_Dnajb2 chr1 75233016 75242264 + chr1 72770058 72770226 2462790 2462790 D NO +NM_178119_Agap1 chr1 91351421 91791845 + chr1 91496003 91496145 0 144582 . YES +NM_178119_Agap1 chr1 91351421 91791845 + chr1 91496155 91496319 0 144734 . YES +NM_178119_Agap1 chr1 91351421 91791845 + chr1 92070253 92070431 278408 718832 U NO +NM_178119_Agap1 chr1 91351421 91791845 + chr1 90592499 90592629 758792 758792 D NO +NM_178241_Il8ra chr1 74238380 74241205 - chr1 75481920 75482054 1240715 1240715 D NO +NM_178241_Il8ra chr1 74238380 74241205 - chr1 72815517 72815742 1422638 1425463 U NO +NM_178241_Il8ra chr1 74238380 74241205 - chr1 72770058 72770226 1468154 1470979 U NO +NM_178241_Il8ra chr1 74238380 74241205 - chr1 72769824 72770056 1468324 1471149 U NO +NM_178243_5830403L16Rik chr1 155697272 155747352 - chr1 155123313 155123435 573837 623917 U NO +NM_178243_5830403L16Rik chr1 155697272 155747352 - chr1 154971572 154971673 725599 775679 U NO +NM_178243_5830403L16Rik chr1 155697272 155747352 - chr1 158510523 158510813 2763171 2763171 D NO +NM_178243_5830403L16Rik chr1 155697272 155747352 - chr1 158537267 158537411 2789915 2789915 D NO +NM_178244_Teddm1 chr1 155724147 155740188 + chr1 155123313 155123435 600712 600712 D NO +NM_178244_Teddm1 chr1 155724147 155740188 + chr1 154971572 154971673 752474 752474 D NO +NM_178244_Teddm1 chr1 155724147 155740188 + chr1 158510523 158510813 2770335 2786376 U NO +NM_178244_Teddm1 chr1 155724147 155740188 + chr1 158537267 158537411 2797079 2813120 U NO +NM_178399_3110035E14Rik chr1 9591248 9617222 + chr1 9619046 9619167 1824 27798 U NO +NM_178399_3110035E14Rik chr1 9591248 9617222 + chr1 9619175 9619382 1953 27927 U NO +NM_178399_3110035E14Rik chr1 9591248 9617222 + chr1 10617233 10617437 1000011 1025985 U NO +NM_178399_3110035E14Rik chr1 9591248 9617222 + chr1 13829227 13829564 4212005 4237979 U NO +NM_178405_Atp1a2 chr1 174201852 174233438 - chr1 174376470 174376659 143032 143032 D NO +NM_178405_Atp1a2 chr1 174201852 174233438 - chr1 172620917 172621080 1580772 1612358 U NO +NM_178405_Atp1a2 chr1 174201852 174233438 - chr1 172620779 172620912 1580940 1612526 U NO +NM_178405_Atp1a2 chr1 174201852 174233438 - chr1 170255081 170255260 3946592 3978178 U NO +NM_178593_Rcsd1 chr1 167572007 167639868 - chr1 167906284 167906554 266416 266416 D NO +NM_178593_Rcsd1 chr1 167572007 167639868 - chr1 167222964 167223261 348746 416607 U NO +NM_178593_Rcsd1 chr1 167572007 167639868 - chr1 170255081 170255260 2615213 2615213 D NO +NM_178593_Rcsd1 chr1 167572007 167639868 - chr1 164215623 164215935 3356072 3423933 U NO +NM_178598_Tagln2 chr1 174430123 174475991 + chr1 174376470 174376659 53464 53464 D NO +NM_178598_Tagln2 chr1 174430123 174475991 + chr1 172620917 172621080 1809043 1809043 D NO +NM_178598_Tagln2 chr1 174430123 174475991 + chr1 172620779 172620912 1809211 1809211 D NO +NM_178598_Tagln2 chr1 174430123 174475991 + chr1 170255081 170255260 4174863 4174863 D NO +NM_178601_Imp4 chr1 34496377 34511555 + chr1 34206924 34207100 289277 289277 D NO +NM_178601_Imp4 chr1 34496377 34511555 + chr1 36106813 36107058 1595258 1610436 U NO +NM_178601_Imp4 chr1 34496377 34511555 + chr1 39492140 39492513 4980585 4995763 U NO +NM_178601_Imp4 chr1 34496377 34511555 + chr1 40325917 40326123 5814362 5829540 U NO +NM_178632_Ints7 chr1 193399085 193447550 + chr1 194258648 194259032 811098 859563 U NO +NM_178632_Ints7 chr1 193399085 193447550 + chr1 194645118 194645475 1197568 1246033 U NO +NM_178632_Ints7 chr1 193399085 193447550 + chr1 194957396 194957723 1509846 1558311 U NO +NM_178632_Ints7 chr1 193399085 193447550 + chr1 195324443 195324741 1876893 1925358 U NO +NM_178653_Sccpdh chr1 181598088 181617593 + chr1 181061299 181061446 536642 536642 D NO +NM_178653_Sccpdh chr1 181598088 181617593 + chr1 182479646 182479905 862053 881558 U NO +NM_178653_Sccpdh chr1 181598088 181617593 + chr1 185854947 185855105 4237354 4256859 U NO +NM_178653_Sccpdh chr1 181598088 181617593 + chr1 174376470 174376659 7221429 7221429 D NO +NM_178690_Rab3gap1 chr1 129765355 129840723 + chr1 132950929 132951247 3110206 3185574 U NO +NM_178690_Rab3gap1 chr1 129765355 129840723 + chr1 133114860 133115015 3274137 3349505 U NO +NM_178690_Rab3gap1 chr1 129765355 129840723 + chr1 135582677 135582828 5741954 5817322 U NO +NM_178690_Rab3gap1 chr1 129765355 129840723 + chr1 135851853 135852218 6011130 6086498 U NO +NM_178691_Yod1 chr1 132612680 132618643 + chr1 132950929 132951247 332286 338249 U NO +NM_178691_Yod1 chr1 132612680 132618643 + chr1 133114860 133115015 496217 502180 U NO +NM_178691_Yod1 chr1 132612680 132618643 + chr1 135582677 135582828 2964034 2969997 U NO +NM_178691_Yod1 chr1 132612680 132618643 + chr1 135851853 135852218 3233210 3239173 U NO +NM_178692_C130074G19Rik chr1 186695805 186707077 - chr1 185854947 185855105 840700 851972 U NO +NM_178692_C130074G19Rik chr1 186695805 186707077 - chr1 182479646 182479905 4215900 4227172 U NO +NM_178692_C130074G19Rik chr1 186695805 186707077 - chr1 181061299 181061446 5634359 5645631 U NO +NM_178692_C130074G19Rik chr1 186695805 186707077 - chr1 194258648 194259032 7551571 7551571 D NO +NM_178775_Rps6kc1 chr1 192524091 192736016 - chr1 194258648 194259032 1522632 1522632 D NO +NM_178775_Rps6kc1 chr1 192524091 192736016 - chr1 194645118 194645475 1909102 1909102 D NO +NM_178775_Rps6kc1 chr1 192524091 192736016 - chr1 194957396 194957723 2221380 2221380 D NO +NM_178775_Rps6kc1 chr1 192524091 192736016 - chr1 195324443 195324741 2588427 2588427 D NO +NM_178779_Rnf152 chr1 107176426 107253513 - chr1 108747519 108747791 1494006 1494006 D NO +NM_178779_Rnf152 chr1 107176426 107253513 - chr1 95186508 95186637 11989789 12066876 U NO +NM_178779_Rnf152 chr1 107176426 107253513 - chr1 120760212 120760461 13506699 13506699 D NO +NM_178779_Rnf152 chr1 107176426 107253513 - chr1 92070253 92070431 15105995 15183082 U NO +NM_178874_Tmcc2 chr1 134252895 134288369 - chr1 133114860 133115015 1137880 1173354 U NO +NM_178874_Tmcc2 chr1 134252895 134288369 - chr1 135582677 135582828 1294308 1294308 D NO +NM_178874_Tmcc2 chr1 134252895 134288369 - chr1 132950929 132951247 1301648 1337122 U NO +NM_178874_Tmcc2 chr1 134252895 134288369 - chr1 135851853 135852218 1563484 1563484 D NO +NM_178883_Gorab chr1 165315039 165340946 - chr1 164215623 164215935 1099104 1125011 U NO +NM_178883_Gorab chr1 165315039 165340946 - chr1 163827897 163828062 1486977 1512884 U NO +NM_178883_Gorab chr1 165315039 165340946 - chr1 167222964 167223261 1882018 1882018 D NO +NM_178883_Gorab chr1 165315039 165340946 - chr1 167906284 167906554 2565338 2565338 D NO +NM_178884_Obsl1 chr1 75482401 75503218 - chr1 75481920 75482054 347 21164 U NO +NM_178884_Obsl1 chr1 75482401 75503218 - chr1 77457642 77457791 1954424 1954424 D NO +NM_178884_Obsl1 chr1 75482401 75503218 - chr1 72815517 72815742 2666659 2687476 U NO +NM_178884_Obsl1 chr1 75482401 75503218 - chr1 72770058 72770226 2712175 2732992 U NO +NM_181405_Rnpepl1 chr1 94807467 94817954 + chr1 95186508 95186637 368554 379041 U NO +NM_181405_Rnpepl1 chr1 94807467 94817954 + chr1 92070253 92070431 2737036 2737036 D NO +NM_181405_Rnpepl1 chr1 94807467 94817954 + chr1 91496155 91496319 3311148 3311148 D NO +NM_181405_Rnpepl1 chr1 94807467 94817954 + chr1 91496003 91496145 3311322 3311322 D NO +NM_181546_Syt14 chr1 194713536 194861959 - chr1 194957396 194957723 95437 95437 D NO +NM_181546_Syt14 chr1 194713536 194861959 - chr1 194645118 194645475 68061 216484 U NO +NM_181546_Syt14 chr1 194713536 194861959 - chr1 195324443 195324741 462484 462484 D NO +NM_181546_Syt14 chr1 194713536 194861959 - chr1 195330701 195330930 468742 468742 D NO +NM_181750_R3hdm1 chr1 129999892 130134312 + chr1 132950929 132951247 2816617 2951037 U NO +NM_181750_R3hdm1 chr1 129999892 130134312 + chr1 133114860 133115015 2980548 3114968 U NO +NM_181750_R3hdm1 chr1 129999892 130134312 + chr1 135582677 135582828 5448365 5582785 U NO +NM_181750_R3hdm1 chr1 129999892 130134312 + chr1 135851853 135852218 5717541 5851961 U NO +NM_181796_Gstp2 chr1 193897651 193905509 - chr1 194258648 194259032 353139 353139 D NO +NM_181796_Gstp2 chr1 193897651 193905509 - chr1 194645118 194645475 739609 739609 D NO +NM_181796_Gstp2 chr1 193897651 193905509 - chr1 194957396 194957723 1051887 1051887 D NO +NM_181796_Gstp2 chr1 193897651 193905509 - chr1 195324443 195324741 1418934 1418934 D NO +NM_182716_Nfasc chr1 134445291 134638354 - chr1 135582677 135582828 944323 944323 D NO +NM_182716_Nfasc chr1 134445291 134638354 - chr1 135851853 135852218 1213499 1213499 D NO +NM_182716_Nfasc chr1 134445291 134638354 - chr1 133114860 133115015 1330276 1523339 U NO +NM_182716_Nfasc chr1 134445291 134638354 - chr1 132950929 132951247 1494044 1687107 U NO +NM_182930_Plekha6 chr1 135077806 135200008 + chr1 135582677 135582828 382669 504871 U NO +NM_182930_Plekha6 chr1 135077806 135200008 + chr1 135851853 135852218 651845 774047 U NO +NM_182930_Plekha6 chr1 135077806 135200008 + chr1 136956468 136956598 1756460 1878662 U NO +NM_182930_Plekha6 chr1 135077806 135200008 + chr1 133114860 133115015 1962791 1962791 D NO +NM_183019_Arhgef4 chr1 34788954 34873560 + chr1 34206924 34207100 581854 581854 D NO +NM_183019_Arhgef4 chr1 34788954 34873560 + chr1 36106813 36107058 1233253 1317859 U NO +NM_183019_Arhgef4 chr1 34788954 34873560 + chr1 39492140 39492513 4618580 4703186 U NO +NM_183019_Arhgef4 chr1 34788954 34873560 + chr1 40325917 40326123 5452357 5536963 U NO +NM_183022_Accn4 chr1 75447063 75470207 + chr1 75481920 75482054 11713 34857 U NO +NM_183022_Accn4 chr1 75447063 75470207 + chr1 77457642 77457791 1987435 2010579 U NO +NM_183022_Accn4 chr1 75447063 75470207 + chr1 72815517 72815742 2631321 2631321 D NO +NM_183022_Accn4 chr1 75447063 75470207 + chr1 72770058 72770226 2676837 2676837 D NO +NM_183027_Ap1s3 chr1 79591820 79668545 - chr1 78630893 78631160 960660 1037385 U NO +NM_183027_Ap1s3 chr1 79591820 79668545 - chr1 77457642 77457791 2134029 2210754 U NO +NM_183027_Ap1s3 chr1 79591820 79668545 - chr1 75481920 75482054 4109766 4186491 U NO +NM_183027_Ap1s3 chr1 79591820 79668545 - chr1 72815517 72815742 6776078 6852803 U NO +NM_183028_Pcmtd1 chr1 7079053 7163709 + chr1 9619046 9619167 2455337 2539993 U NO +NM_183028_Pcmtd1 chr1 7079053 7163709 + chr1 9619175 9619382 2455466 2540122 U NO +NM_183028_Pcmtd1 chr1 7079053 7163709 + chr1 10617233 10617437 3453524 3538180 U NO +NM_183028_Pcmtd1 chr1 7079053 7163709 + chr1 13829227 13829564 6665518 6750174 U NO +NM_183124_Defb41 chr1 18241071 18350659 - chr1 17030405 17030545 1210526 1320114 U NO +NM_183124_Defb41 chr1 18241071 18350659 - chr1 13829227 13829564 4411507 4521095 U NO +NM_183124_Defb41 chr1 18241071 18350659 - chr1 24609562 24609623 6258903 6258903 D NO +NM_183124_Defb41 chr1 18241071 18350659 - chr1 24609923 24609992 6259264 6259264 D NO +NM_183355_Pbx1 chr1 170049495 170512777 - chr1 170255081 170255260 0 257517 . YES +NM_183355_Pbx1 chr1 170049495 170512777 - chr1 172620779 172620912 2108002 2108002 D NO +NM_183355_Pbx1 chr1 170049495 170512777 - chr1 172620917 172621080 2108140 2108140 D NO +NM_183355_Pbx1 chr1 170049495 170512777 - chr1 167906284 167906554 2142941 2606223 U NO +NM_183391_Tnfsf18 chr1 163373523 163524094 + chr1 163827897 163828062 303803 454374 U NO +NM_183391_Tnfsf18 chr1 163373523 163524094 + chr1 164215623 164215935 691529 842100 U NO +NM_183391_Tnfsf18 chr1 163373523 163524094 + chr1 167222964 167223261 3698870 3849441 U NO +NM_183391_Tnfsf18 chr1 163373523 163524094 + chr1 159240736 159240866 4132657 4132657 D NO +NM_194333_Slc23a3 chr1 75120731 75130464 - chr1 75481920 75482054 351456 351456 D NO +NM_194333_Slc23a3 chr1 75120731 75130464 - chr1 72815517 72815742 2304989 2314722 U NO +NM_194333_Slc23a3 chr1 75120731 75130464 - chr1 77457642 77457791 2327178 2327178 D NO +NM_194333_Slc23a3 chr1 75120731 75130464 - chr1 72770058 72770226 2350505 2360238 U NO +NM_198006_6330578E17Rik chr1 37473934 37474944 - chr1 36106813 36107058 1366876 1367886 U NO +NM_198006_6330578E17Rik chr1 37473934 37474944 - chr1 39492140 39492513 2017196 2017196 D NO +NM_198006_6330578E17Rik chr1 37473934 37474944 - chr1 40325917 40326123 2850973 2850973 D NO +NM_198006_6330578E17Rik chr1 37473934 37474944 - chr1 34206924 34207100 3266834 3267844 U NO +NM_198006_6330578E17Rik chr1 37477057 37486928 - chr1 36106813 36107058 1369999 1379870 U NO +NM_198006_6330578E17Rik chr1 37477057 37486928 - chr1 39492140 39492513 2005212 2005212 D NO +NM_198006_6330578E17Rik chr1 37477057 37486928 - chr1 40325917 40326123 2838989 2838989 D NO +NM_198006_6330578E17Rik chr1 37477057 37486928 - chr1 34206924 34207100 3269957 3279828 U NO +NM_198028_Serpinb10 chr1 109425580 109445838 + chr1 108747519 108747791 677789 677789 D NO +NM_198028_Serpinb10 chr1 109425580 109445838 + chr1 120760212 120760461 11314374 11334632 U NO +NM_198028_Serpinb10 chr1 109425580 109445838 + chr1 95186508 95186637 14238943 14238943 D NO +NM_198028_Serpinb10 chr1 109425580 109445838 + chr1 92070253 92070431 17355149 17355149 D NO +NM_198127_Abi2 chr1 60466022 60537998 + chr1 63664888 63665018 3126890 3198866 U NO +NM_198127_Abi2 chr1 60466022 60537998 + chr1 55283572 55283675 5182347 5182347 D NO +NM_198127_Abi2 chr1 60466022 60537998 + chr1 54631692 54631815 5834207 5834207 D NO +NM_198127_Abi2 chr1 60466022 60537998 + chr1 52625416 52625560 7840462 7840462 D NO +NM_198247_Sertad4 chr1 194670313 194693726 - chr1 194645118 194645475 24838 48251 U NO +NM_198247_Sertad4 chr1 194670313 194693726 - chr1 194957396 194957723 263670 263670 D NO +NM_198247_Sertad4 chr1 194670313 194693726 - chr1 194258648 194259032 411281 434694 U NO +NM_198247_Sertad4 chr1 194670313 194693726 - chr1 195324443 195324741 630717 630717 D NO +NM_198303_Eif5b chr1 38054627 38112414 + chr1 39492140 39492513 1379726 1437513 U NO +NM_198303_Eif5b chr1 38054627 38112414 + chr1 36106813 36107058 1947569 1947569 D NO +NM_198303_Eif5b chr1 38054627 38112414 + chr1 40325917 40326123 2213503 2271290 U NO +NM_198303_Eif5b chr1 38054627 38112414 + chr1 34206924 34207100 3847527 3847527 D NO +NM_198652_6430706D22Rik chr1 90158880 90174174 - chr1 89989553 89989714 169166 184460 U NO +NM_198652_6430706D22Rik chr1 90158880 90174174 - chr1 90412932 90413132 238758 238758 D NO +NM_198652_6430706D22Rik chr1 90158880 90174174 - chr1 90592499 90592629 418325 418325 D NO +NM_198652_6430706D22Rik chr1 90158880 90174174 - chr1 91496003 91496145 1321829 1321829 D NO +NM_198653_Iars2 chr1 187109458 187153280 - chr1 185854947 185855105 1254353 1298175 U NO +NM_198653_Iars2 chr1 187109458 187153280 - chr1 182479646 182479905 4629553 4673375 U NO +NM_198653_Iars2 chr1 187109458 187153280 - chr1 181061299 181061446 6048012 6091834 U NO +NM_198653_Iars2 chr1 187109458 187153280 - chr1 194258648 194259032 7105368 7105368 D NO +NM_198654_Nsl1 chr1 192886918 192919389 + chr1 194258648 194259032 1339259 1371730 U NO +NM_198654_Nsl1 chr1 192886918 192919389 + chr1 194645118 194645475 1725729 1758200 U NO +NM_198654_Nsl1 chr1 192886918 192919389 + chr1 194957396 194957723 2038007 2070478 U NO +NM_198654_Nsl1 chr1 192886918 192919389 + chr1 195324443 195324741 2405054 2437525 U NO +NM_198680_Serpinb3b chr1 109033488 109059720 - chr1 108747519 108747791 285697 311929 U NO +NM_198680_Serpinb3b chr1 109033488 109059720 - chr1 120760212 120760461 11700492 11700492 D NO +NM_198680_Serpinb3b chr1 109033488 109059720 - chr1 95186508 95186637 13846851 13873083 U NO +NM_198680_Serpinb3b chr1 109033488 109059720 - chr1 92070253 92070431 16963057 16989289 U NO +NM_198899_Ugcgl1 chr1 36196873 36301555 - chr1 36106813 36107058 89815 194497 U NO +NM_198899_Ugcgl1 chr1 36196873 36301555 - chr1 34206924 34207100 1989773 2094455 U NO +NM_198899_Ugcgl1 chr1 36196873 36301555 - chr1 39492140 39492513 3190585 3190585 D NO +NM_198899_Ugcgl1 chr1 36196873 36301555 - chr1 40325917 40326123 4024362 4024362 D NO +NM_198934_Pou2f1 chr1 167804181 167932753 - chr1 167906284 167906554 0 26199 . YES +NM_198934_Pou2f1 chr1 167804181 167932753 - chr1 167222964 167223261 580920 709492 U NO +NM_198934_Pou2f1 chr1 167804181 167932753 - chr1 170255081 170255260 2322328 2322328 D NO +NM_198934_Pou2f1 chr1 167804181 167932753 - chr1 164215623 164215935 3588246 3716818 U NO +NM_199007_Sgol2 chr1 58026657 58085164 + chr1 55283572 55283675 2742982 2742982 D NO +NM_199007_Sgol2 chr1 58026657 58085164 + chr1 54631692 54631815 3394842 3394842 D NO +NM_199007_Sgol2 chr1 58026657 58085164 + chr1 52625416 52625560 5401097 5401097 D NO +NM_199007_Sgol2 chr1 58026657 58085164 + chr1 63664888 63665018 5579724 5638231 U NO +NM_199021_Dpp10 chr1 125044486 126749525 - chr1 120760212 120760461 4284025 5989064 U NO +NM_199021_Dpp10 chr1 125044486 126749525 - chr1 132950929 132951247 6201404 6201404 D NO +NM_199021_Dpp10 chr1 125044486 126749525 - chr1 133114860 133115015 6365335 6365335 D NO +NM_199021_Dpp10 chr1 125044486 126749525 - chr1 135582677 135582828 8833152 8833152 D NO +NM_201363_Serpinb3c chr1 109088051 109198931 - chr1 108747519 108747791 340260 451140 U NO +NM_201363_Serpinb3c chr1 109088051 109198931 - chr1 120760212 120760461 11561281 11561281 D NO +NM_201363_Serpinb3c chr1 109088051 109198931 - chr1 95186508 95186637 13901414 14012294 U NO +NM_201363_Serpinb3c chr1 109088051 109198931 - chr1 92070253 92070431 17017620 17128500 U NO +NM_201376_Serpinb3d chr1 108974770 108980057 - chr1 108747519 108747791 226979 232266 U NO +NM_201376_Serpinb3d chr1 108974770 108980057 - chr1 120760212 120760461 11780155 11780155 D NO +NM_201376_Serpinb3d chr1 108974770 108980057 - chr1 95186508 95186637 13788133 13793420 U NO +NM_201376_Serpinb3d chr1 108974770 108980057 - chr1 92070253 92070431 16904339 16909626 U NO +NM_201641_Ugt1a10 chr1 89922380 90115570 + chr1 89989553 89989714 0 67173 . YES +NM_201641_Ugt1a10 chr1 89922380 90115570 + chr1 90412932 90413132 297362 490552 U NO +NM_201641_Ugt1a10 chr1 89922380 90115570 + chr1 90592499 90592629 476929 670119 U NO +NM_201641_Ugt1a10 chr1 89922380 90115570 + chr1 88408969 88409267 1513113 1513113 D NO +NM_206896_Olfr12 chr1 94516341 94538591 + chr1 95186508 95186637 647917 670167 U NO +NM_206896_Olfr12 chr1 94516341 94538591 + chr1 92070253 92070431 2445910 2445910 D NO +NM_206896_Olfr12 chr1 94516341 94538591 + chr1 91496155 91496319 3020022 3020022 D NO +NM_206896_Olfr12 chr1 94516341 94538591 + chr1 91496003 91496145 3020196 3020196 D NO +NM_207031_Ano7 chr1 95270385 95302271 + chr1 95186508 95186637 83748 83748 D NO +NM_207031_Ano7 chr1 95270385 95302271 + chr1 92070253 92070431 3199954 3199954 D NO +NM_207031_Ano7 chr1 95270385 95302271 + chr1 91496155 91496319 3774066 3774066 D NO +NM_207031_Ano7 chr1 95270385 95302271 + chr1 91496003 91496145 3774240 3774240 D NO +NM_207137_Olfr417 chr1 176299050 176299979 + chr1 174376470 174376659 1922391 1922391 D NO +NM_207137_Olfr417 chr1 176299050 176299979 + chr1 172620917 172621080 3677970 3677970 D NO +NM_207137_Olfr417 chr1 176299050 176299979 + chr1 172620779 172620912 3678138 3678138 D NO +NM_207137_Olfr417 chr1 176299050 176299979 + chr1 181061299 181061446 4761320 4762249 U NO +NM_207137_Olfr417 chr1 176321202 176322113 + chr1 174376470 174376659 1944543 1944543 D NO +NM_207137_Olfr417 chr1 176321202 176322113 + chr1 172620917 172621080 3700122 3700122 D NO +NM_207137_Olfr417 chr1 176321202 176322113 + chr1 172620779 172620912 3700290 3700290 D NO +NM_207137_Olfr417 chr1 176321202 176322113 + chr1 181061299 181061446 4739186 4740097 U NO +NM_207158_Olfr427 chr1 176028781 176030538 + chr1 174376470 174376659 1652122 1652122 D NO +NM_207158_Olfr427 chr1 176028781 176030538 + chr1 172620917 172621080 3407701 3407701 D NO +NM_207158_Olfr427 chr1 176028781 176030538 + chr1 172620779 172620912 3407869 3407869 D NO +NM_207158_Olfr427 chr1 176028781 176030538 + chr1 181061299 181061446 5030761 5032518 U NO +NM_207225_Hdac4 chr1 93755950 94103099 - chr1 95186508 95186637 1083409 1083409 D NO +NM_207225_Hdac4 chr1 93755950 94103099 - chr1 92070253 92070431 1685519 2032668 U NO +NM_207225_Hdac4 chr1 93755950 94103099 - chr1 91496155 91496319 2259631 2606780 U NO +NM_207225_Hdac4 chr1 93755950 94103099 - chr1 91496003 91496145 2259805 2606954 U NO +NM_207228_Tsga10 chr1 37783457 37922148 - chr1 39492140 39492513 1569992 1569992 D NO +NM_207228_Tsga10 chr1 37783457 37922148 - chr1 36106813 36107058 1676399 1815090 U NO +NM_207228_Tsga10 chr1 37783457 37922148 - chr1 40325917 40326123 2403769 2403769 D NO +NM_207228_Tsga10 chr1 37783457 37922148 - chr1 34206924 34207100 3576357 3715048 U NO +NM_207233_C1ql2 chr1 122196386 122239751 + chr1 120760212 120760461 1435925 1435925 D NO +NM_207233_C1ql2 chr1 122196386 122239751 + chr1 132950929 132951247 10711178 10754543 U NO +NM_207233_C1ql2 chr1 122196386 122239751 + chr1 133114860 133115015 10875109 10918474 U NO +NM_207233_C1ql2 chr1 122196386 122239751 + chr1 135582677 135582828 13342926 13386291 U NO +NM_207281_4832428D23Rik chr1 44260915 44515719 - chr1 44195449 44195639 65276 320080 U NO +NM_207281_4832428D23Rik chr1 44260915 44515719 - chr1 40325917 40326123 3934792 4189596 U NO +NM_207281_4832428D23Rik chr1 44260915 44515719 - chr1 39492140 39492513 4768402 5023206 U NO +NM_207281_4832428D23Rik chr1 44260915 44515719 - chr1 52625416 52625560 8109697 8109697 D NO +NM_207583_Fam5b chr1 160175402 160286644 - chr1 159240736 159240866 934536 1045778 U NO +NM_207583_Fam5b chr1 160175402 160286644 - chr1 158835251 158835391 1340011 1451253 U NO +NM_207583_Fam5b chr1 160175402 160286644 - chr1 158580638 158580759 1594643 1705885 U NO +NM_207583_Fam5b chr1 160175402 160286644 - chr1 158537267 158537411 1637991 1749233 U NO +NM_207653_Cflar chr1 58768296 58813658 + chr1 55283572 55283675 3484621 3484621 D NO +NM_207653_Cflar chr1 58768296 58813658 + chr1 54631692 54631815 4136481 4136481 D NO +NM_207653_Cflar chr1 58768296 58813658 + chr1 63664888 63665018 4851230 4896592 U NO +NM_207653_Cflar chr1 58768296 58813658 + chr1 52625416 52625560 6142736 6142736 D NO +NM_207653_Cflar chr1 58813703 58815725 + chr1 55283572 55283675 3530028 3530028 D NO +NM_207653_Cflar chr1 58813703 58815725 + chr1 54631692 54631815 4181888 4181888 D NO +NM_207653_Cflar chr1 58813703 58815725 + chr1 63664888 63665018 4849163 4851185 U NO +NM_207653_Cflar chr1 58813703 58815725 + chr1 52625416 52625560 6188143 6188143 D NO +NM_213616_Atp2b4 chr1 135602265 135697538 - chr1 135582677 135582828 19437 114710 U NO +NM_213616_Atp2b4 chr1 135602265 135697538 - chr1 135851853 135852218 154315 154315 D NO +NM_213616_Atp2b4 chr1 135602265 135697538 - chr1 136956468 136956598 1258930 1258930 D NO +NM_213616_Atp2b4 chr1 135602265 135697538 - chr1 133114860 133115015 2487250 2582523 U NO +NR_002840_Gas5 chr1 162964758 162968663 + chr1 163827897 163828062 859234 863139 U NO +NR_002840_Gas5 chr1 162964758 162968663 + chr1 164215623 164215935 1246960 1250865 U NO +NR_002840_Gas5 chr1 162964758 162968663 + chr1 159240736 159240866 3723892 3723892 D NO +NR_002840_Gas5 chr1 162964758 162968663 + chr1 158835251 158835391 4129367 4129367 D NO +NR_002858_EG241041 chr1 21268965 21306401 - chr1 24609562 24609623 3303161 3303161 D NO +NR_002858_EG241041 chr1 21268965 21306401 - chr1 24609923 24609992 3303522 3303522 D NO +NR_002858_EG241041 chr1 21268965 21306401 - chr1 24730996 24731077 3424595 3424595 D NO +NR_002858_EG241041 chr1 21268965 21306401 - chr1 17030405 17030545 4238420 4275856 U NO +NR_002870_Dnm3os chr1 164119785 164155671 + chr1 164215623 164215935 59952 95838 U NO +NR_002870_Dnm3os chr1 164119785 164155671 + chr1 163827897 163828062 291723 291723 D NO +NR_002870_Dnm3os chr1 164119785 164155671 + chr1 167222964 167223261 3067293 3103179 U NO +NR_002870_Dnm3os chr1 164119785 164155671 + chr1 167906284 167906554 3750613 3786499 U NO +NR_003623_EG277333 chr1 182251970 182262902 - chr1 182479646 182479905 216744 216744 D NO +NR_003623_EG277333 chr1 182251970 182262902 - chr1 181061299 181061446 1190524 1201456 U NO +NR_003623_EG277333 chr1 182251970 182262902 - chr1 185854947 185855105 3592045 3592045 D NO +NR_003623_EG277333 chr1 182251970 182262902 - chr1 174376470 174376659 7875311 7886243 U NO +NR_026896_4931440L10Rik chr1 136437533 136449760 - chr1 136956468 136956598 506708 506708 D NO +NR_026896_4931440L10Rik chr1 136437533 136449760 - chr1 135851853 135852218 585315 597542 U NO +NR_026896_4931440L10Rik chr1 136437533 136449760 - chr1 135582677 135582828 854705 866932 U NO +NR_026896_4931440L10Rik chr1 136437533 136449760 - chr1 138437726 138437860 1987966 1987966 D NO
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/peaks_per_feature6.summary Thu Sep 01 04:47:28 2016 -0400 @@ -0,0 +1,957 @@ +#gene.id gene.chr gene.start gene.end gene.strand chr start end dist_closest dist_TSS direction in_the_gene +AF064749_Col6a3 chr1 92566771 92800755 - chr1 92070253 92070431 496340 730324 U NO +AK015559_4930472D16Rik chr1 25020851 25021989 - chr1 24730996 24731077 289774 290912 U NO +AK030377_A330023F24Rik chr1 196781953 196826186 - chr1 197057796 197057843 231610 231610 D NO +AK080193_A530079E22Rik chr1 89401837 89403491 - chr1 89989553 89989714 586062 586062 D NO +AK082264_C230030N03Rik chr1 34735043 34781084 + chr1 34206924 34207100 527943 527943 D NO +BC006931_AI597479 chr1 43153807 43172843 + chr1 44195449 44195639 1022606 1041642 U NO +BC021773_Glb1l chr1 75193364 75207353 - chr1 75481920 75482054 274567 274567 D NO +BC023951_D1Ertd622e chr1 99540054 99558631 - chr1 95186508 95186637 4353417 4371994 U NO +BC028767_3110009E18Rik chr1 122017764 122114603 + chr1 120760212 120760461 1257303 1257303 D NO +BC031781_BC031781 chr1 182781250 182798240 + chr1 182479646 182479905 301345 301345 D NO +BC034187_BC035947 chr1 78493611 78497758 - chr1 78630893 78631160 133135 133135 D NO +BC043098_Fam168b chr1 34870072 34917183 - chr1 34206924 34207100 662972 710083 U NO +BC049091_D1Bwg0212e chr1 39592545 39603734 + chr1 39492140 39492513 100032 100032 D NO +BC049713_Ankrd45 chr1 163072817 163099826 + chr1 163827897 163828062 728071 755080 U NO +BC050813_4921511C04Rik chr1 37157481 37244861 + chr1 36106813 36107058 1050423 1050423 D NO +BC051128_4921521F21Rik chr1 65059273 65079312 - chr1 63664888 63665018 1394255 1414294 U NO +BC052693_2810422O20Rik chr1 165924541 165927371 + chr1 167222964 167223261 1295593 1298423 U NO +BC052931_A630001G21Rik chr1 87601462 87674840 - chr1 88408969 88409267 734129 734129 D NO +BC053100_5730559C18Rik chr1 138110108 138130841 - chr1 138437726 138437860 306885 306885 D NO +BC054802_9630058J23Rik chr1 181476521 181558044 + chr1 181061299 181061446 415075 415075 D NO +BC055845_2810025M15Rik chr1 159342483 159350353 + chr1 159240736 159240866 101617 101617 D NO +BC055955_A130010J15Rik chr1 194999663 195004015 + chr1 194957396 194957723 41940 41940 D NO +BC057872_Rab3gap2 chr1 187028006 187110623 + chr1 185854947 185855105 1172901 1172901 D NO +BC058417_2610017I09Rik chr1 42648822 42751667 - chr1 44195449 44195639 1443782 1443782 D NO +BC059254_Phlpp chr1 108042052 108306367 + chr1 108747519 108747791 441152 705467 U NO +BC070435_Fam123c chr1 34620070 34671545 + chr1 34206924 34207100 412970 412970 D NO +BC070446_Fam135a chr1 24017617 24107170 - chr1 24609562 24609623 502392 502392 D NO +BC071241_9430016H08Rik chr1 57463192 57497936 + chr1 55283572 55283675 2179517 2179517 D NO +BC072639_2010300C02Rik chr1 37646877 37776659 - chr1 36106813 36107058 1539819 1669601 U NO +BC080290_5033414K04Rik chr1 84032539 84360735 - chr1 88408969 88409267 4048234 4048234 D NO +BC082310_9430031J16Rik chr1 81073525 81338329 + chr1 78630893 78631160 2442365 2442365 D NO +BC089525_2310007B03Rik chr1 95047933 95063386 - chr1 95186508 95186637 123122 123122 D NO +BC089561_Cep350 chr1 157692096 157820375 - chr1 158510523 158510813 690148 690148 D NO +BC147491_A230074B11Rik chr1 37083441 37133840 + chr1 36106813 36107058 976383 976383 D NO +BC147657_9630028B13Rik chr1 187253234 187265698 - chr1 185854947 185855105 1398129 1410593 U NO +ENSMUST00000027997_Rgs5 chr1 171625108 171625913 + chr1 172620779 172620912 994866 995671 U NO +ENSMUST00000051203_1700001G17Rik chr1 33726669 33727551 + chr1 34206924 34207100 479373 480255 U NO +ENSMUST00000054333_A130050O07Rik chr1 139823828 139826840 + chr1 140381656 140381785 554816 557828 U NO +ENSMUST00000056879_C230029F24Rik chr1 49301475 49397265 + chr1 52625416 52625560 3228151 3323941 U NO +ENSMUST00000057543_A730013G03Rik chr1 194659323 194661397 - chr1 194645118 194645475 13848 15922 U NO +ENSMUST00000062637_4930470H14Rik chr1 175156866 175201240 + chr1 174376470 174376659 780207 780207 D NO +ENSMUST00000070048_ENSMUSG00000056128 chr1 92571736 92576368 + chr1 92070253 92070431 501305 501305 D NO +ENSMUST00000070987_EG433384 chr1 183781705 183783320 - chr1 182479646 182479905 1301800 1303415 U NO +ENSMUST00000072395_Olfr1406 chr1 175113651 175120746 - chr1 174376470 174376659 736992 744087 U NO +ENSMUST00000094288_Wdr64 chr1 177654798 177798070 + chr1 174376470 174376659 3278139 3278139 D NO +ENSMUST00000094950_Pgap1 chr1 54529849 54614539 - chr1 54631692 54631815 17153 17153 D NO +ENSMUST00000097776_Cnnm3 chr1 36567938 36585164 + chr1 36106813 36107058 460880 460880 D NO +EU429481_Igfn1 chr1 137825893 137890307 - chr1 138437726 138437860 547419 547419 D NO +FJ024495_Ildr2 chr1 168236882 168239692 - chr1 167906284 167906554 330328 333138 U NO +FJ210934_Unc80 chr1 66514856 66556109 + chr1 63664888 63665018 2849838 2849838 D NO +NM_001001565_Chpf chr1 75470923 75476437 - chr1 75481920 75482054 5483 5483 D NO +NM_001001809_Olfr218 chr1 175130421 175134469 + chr1 174376470 174376659 753762 753762 D NO +NM_001001883_Hecw2 chr1 53867026 54252002 - chr1 54631692 54631815 379690 379690 D NO +NM_001003917_Atg9a chr1 75177439 75189181 - chr1 75481920 75482054 292739 292739 D NO +NM_001004173_Sgpp2 chr1 78306692 78416864 + chr1 78630893 78631160 214029 324201 U NO +NM_001005423_Mreg chr1 72170192 72258895 - chr1 72769824 72770056 510929 510929 D NO +NM_001005507_Smg7 chr1 154684125 154750410 - chr1 154971572 154971673 221162 221162 D NO +NM_001005508_Arhgap30 chr1 173319072 173340822 + chr1 172620917 172621080 697992 697992 D NO +NM_001005520_Olfr244 chr1 176032571 176067605 - chr1 174376470 174376659 1655912 1690946 U NO +NM_001008419_Aox3l1 chr1 58335180 58437083 + chr1 55283572 55283675 3051505 3051505 D NO +NM_001008426_EG433365 chr1 155721475 155724001 + chr1 155123313 155123435 598040 598040 D NO +NM_001008533_Adora1 chr1 136095799 136181661 - chr1 135851853 135852218 243581 329443 U NO +NM_001009940_Il19 chr1 132786042 132915234 - chr1 132950929 132951247 35695 35695 D NO +NM_001011525_Olfr1415 chr1 94376258 94381054 - chr1 95186508 95186637 805454 805454 D NO +NM_001011525_Olfr1415 chr1 94407669 94418761 - chr1 95186508 95186637 767747 767747 D NO +NM_001011684_Nms chr1 38995917 39007113 + chr1 39492140 39492513 485027 496223 U NO +NM_001011873_Xkr9 chr1 13658862 13691794 + chr1 13829227 13829564 137433 170365 U NO +NM_001011874_Xkr4 chr1 3203722 3713108 - chr1 9619046 9619167 5905938 5905938 D NO +NM_001012330_Zfp238 chr1 179359958 179380892 + chr1 181061299 181061446 1680407 1701341 U NO +NM_001013374_Lman2l chr1 36362897 36502078 - chr1 36106813 36107058 255839 395020 U NO +NM_001013382_Lrrc52 chr1 169375806 169397136 - chr1 170255081 170255260 857945 857945 D NO +NM_001013771_Gm973 chr1 59573136 59693241 + chr1 63664888 63665018 3971647 4091752 U NO +NM_001013779_Aim2 chr1 175385835 175396165 + chr1 174376470 174376659 1009176 1009176 D NO +NM_001014974_Ttll4 chr1 74708314 74748400 + chr1 75481920 75482054 733520 773606 U NO +NM_001024721_BC094916 chr1 175451304 175466101 - chr1 174376470 174376659 1074645 1089442 U NO +NM_001024945_Qsox1 chr1 157625296 157670499 - chr1 158510523 158510813 840024 840024 D NO +NM_001025156_Ccdc93 chr1 123208865 123403037 + chr1 120760212 120760461 2448404 2448404 D NO +NM_001025565_Lhx9 chr1 140694768 140740509 - chr1 140381656 140381785 312983 358724 U NO +NM_001025602_Il1rl1 chr1 40462708 40522260 + chr1 40325917 40326123 136585 136585 D NO +NM_001029984_Fcrlb chr1 172836813 172843072 - chr1 172620917 172621080 215733 221992 U NO +NM_001037170_Tomm40l chr1 173147934 173152645 - chr1 172620917 172621080 526854 531565 U NO +NM_001037725_Fam117b chr1 59937517 60042190 + chr1 63664888 63665018 3622698 3727371 U NO +NM_001037918_Lipt1 chr1 37928603 37934232 + chr1 39492140 39492513 1557908 1563537 U NO +NM_001037999_Dbi chr1 122009883 122046068 - chr1 120760212 120760461 1249422 1285607 U NO +NM_001038592_Glrx2 chr1 145585774 145608282 + chr1 145591041 145591176 0 5267 . YES +NM_001038619_Dnm3 chr1 163902671 164408155 - chr1 164215623 164215935 0 192220 . YES +NM_001039126_Asb1 chr1 93437143 93461729 + chr1 92070253 92070431 1366712 1366712 D NO +NM_001039472_Kif21b chr1 138027986 138074578 + chr1 138437726 138437860 363148 409740 U NO +NM_001039475_Slco6b1 chr1 98802763 98894139 - chr1 95186508 95186637 3616126 3707502 U NO +NM_001039482_Klhl20 chr1 163018528 163061699 - chr1 163827897 163828062 766198 766198 D NO +NM_001039483_Tmco1 chr1 169238419 169279112 + chr1 170255081 170255260 975969 1016662 U NO +NM_001039484_Kcnj10 chr1 174258852 174304216 + chr1 174376470 174376659 72254 117618 U NO +NM_001039493_Plekhm3 chr1 64832557 65032270 - chr1 63664888 63665018 1167539 1367252 U NO +NM_001039495_Ccdc108 chr1 74947239 74982168 - chr1 75481920 75482054 499752 499752 D NO +NM_001039509_Pnkd chr1 74331504 74400245 + chr1 75481920 75482054 1081675 1150416 U NO +NM_001039710_Coq10b chr1 55101051 55129538 + chr1 55283572 55283675 154034 182521 U NO +NM_001039934_Mtap2 chr1 66187374 66489157 + chr1 63664888 63665018 2522356 2522356 D NO +NM_001042634_Clk1 chr1 58467034 58480936 - chr1 55283572 55283675 3183359 3197261 U NO +NM_001045481_Ifi203 chr1 175804708 175928457 - chr1 174376470 174376659 1428049 1551798 U NO +NM_001077189_Fcgr2b chr1 172890316 172916060 - chr1 172620917 172621080 269236 294980 U NO +NM_001077353_Gsta3 chr1 21230690 21255722 + chr1 24609562 24609623 3353840 3378872 U NO +NM_001077403_Nrp2 chr1 62724499 63100251 + chr1 63664888 63665018 564637 940389 U NO +NM_001081023_Cacna1s chr1 137949297 138016348 + chr1 138437726 138437860 421378 488429 U NO +NM_001081078_Lct chr1 130174327 130224881 - chr1 132950929 132951247 2726048 2726048 D NO +NM_001081079_Ogfrl1 chr1 23278472 23451348 - chr1 24609562 24609623 1158214 1158214 D NO +NM_001081259_Mfsd7b chr1 192825304 192850534 - chr1 194258648 194259032 1408114 1408114 D NO +NM_001081275_1700009P17Rik chr1 173032694 173057075 + chr1 172620917 172621080 411614 411614 D NO +NM_001081361_Mosc1 chr1 186610666 186635172 - chr1 185854947 185855105 755561 780067 U NO +NM_001081756_E030049G20Rik chr1 128277776 128727190 - chr1 132950929 132951247 4223739 4223739 D NO +NM_001082573_Crygc chr1 65118108 65146863 - chr1 63664888 63665018 1453090 1481845 U NO +NM_001083897_Mpzl1 chr1 167522314 167564669 - chr1 167222964 167223261 299053 341408 U NO +NM_001085409_Steap3 chr1 122037552 122169282 - chr1 120760212 120760461 1277091 1408821 U NO +NM_001099637_Cep170 chr1 178663793 178744307 - chr1 181061299 181061446 2316992 2316992 D NO +NM_001103182_Lin9 chr1 182572002 182620816 + chr1 182479646 182479905 92097 92097 D NO +NM_001105667_Dtymk chr1 95689006 95698492 - chr1 95186508 95186637 502369 511855 U NO +NM_001110783_Ank1 chr1 77759424 77766452 - chr1 77457642 77457791 301633 308661 U NO +NM_001110831_Dnpep chr1 75304471 75314673 - chr1 75481920 75482054 167247 167247 D NO +NM_001111059_Cd34 chr1 196683888 196826273 + chr1 197057796 197057843 231523 373908 U NO +NM_001111279_Wdfy1 chr1 79689958 79772698 - chr1 78630893 78631160 1058798 1141538 U NO +NM_001111314_Ngef chr1 89373415 89470499 - chr1 89989553 89989714 519054 519054 D NO +NM_001111316_Ptprc chr1 139959456 140088994 - chr1 140381656 140381785 292662 292662 D NO +NM_001111320_Idh1 chr1 65185668 65233033 - chr1 63664888 63665018 1520650 1568015 U NO +NM_001113394_Cd247 chr1 167711216 167807397 + chr1 167906284 167906554 98887 195068 U NO +NM_001122685_Rhbdd1 chr1 82313047 82441937 + chr1 78630893 78631160 3681887 3681887 D NO +NM_001126046_Fam178b chr1 36619544 36740008 - chr1 36106813 36107058 512486 632950 U NO +NM_001128605_Psen2 chr1 182157140 182247499 - chr1 182479646 182479905 232147 232147 D NO +NM_001128609_Dedd chr1 173258959 173273620 + chr1 172620917 172621080 637879 637879 D NO +NM_001130174_Tnnt2 chr1 137732931 137748838 + chr1 138437726 138437860 688888 704795 U NO +NM_001134829_Lpgat1 chr1 193521144 193605705 + chr1 194258648 194259032 652943 737504 U NO +NM_001136070_Lgtn chr1 133049773 133084235 + chr1 133114860 133115015 30625 65087 U NO +NM_001142647_Tmem194b chr1 52687569 52708760 + chr1 52625416 52625560 62009 62009 D NO +NM_001159649_Lax1 chr1 135575626 135586665 - chr1 135582677 135582828 0 3837 . YES +NM_001159719_Sept2 chr1 95375046 95406820 + chr1 95186508 95186637 188409 188409 D NO +NM_001159730_Pdc chr1 152154402 152181077 + chr1 154971572 154971673 2790495 2817170 U NO +NM_007381_Acadl chr1 66861363 66909886 - chr1 63664888 63665018 3196345 3244868 U NO +NM_007415_Parp1 chr1 182499033 182531385 + chr1 182479646 182479905 19128 19128 D NO +NM_007422_Adss chr1 179693113 179888685 - chr1 181061299 181061446 1172614 1172614 D NO +NM_007432_Akp3 chr1 89021583 89042994 + chr1 88408969 88409267 612316 612316 D NO +NM_007433_Akp5 chr1 88983274 88986861 - chr1 88408969 88409267 574007 577594 U NO +NM_007453_Prdx6 chr1 163170243 163210238 - chr1 163827897 163828062 617659 617659 D NO +NM_007463_Speg chr1 75371872 75428879 + chr1 75481920 75482054 53041 110048 U NO +NM_007495_Astn1 chr1 160292424 160626748 + chr1 159240736 159240866 1051558 1051558 D NO +NM_007498_Atf3 chr1 192994178 193057173 - chr1 194258648 194259032 1201475 1201475 D NO +NM_007525_Bard1 chr1 71076934 71149526 - chr1 72769824 72770056 1620298 1620298 D NO +NM_007561_Bmpr2 chr1 59820296 59927706 + chr1 63664888 63665018 3737182 3844592 U NO +NM_007570_Btg2 chr1 135971251 135991759 - chr1 135851853 135852218 119033 139541 U NO +NM_007576_C4bp chr1 132531357 132558199 - chr1 132950929 132951247 392730 392730 D NO +NM_007642_Cd28 chr1 60763315 60830749 + chr1 63664888 63665018 2834139 2901573 U NO +NM_007649_Cd48 chr1 173603288 173635385 + chr1 174376470 174376659 741085 773182 U NO +NM_007685_Cfc1 chr1 34592493 34601156 + chr1 34206924 34207100 385393 385393 D NO +NM_007695_Chi3l1 chr1 136069840 136086738 + chr1 135851853 135852218 217622 217622 D NO +NM_007722_Cxcr7 chr1 92100063 92112863 + chr1 92070253 92070431 29632 29632 D NO +NM_007733_Col19a1 chr1 24258667 24602262 - chr1 24609562 24609623 7300 7300 D NO +NM_007734_Col4a3 chr1 82583506 82718629 + chr1 78630893 78631160 3952346 3952346 D NO +NM_007735_Col4a4 chr1 82438140 82584744 - chr1 78630893 78631160 3806980 3953584 U NO +NM_007737_Col5a2 chr1 45431177 45560226 - chr1 44195449 44195639 1235538 1364587 U NO +NM_007740_Col9a1 chr1 24164692 24268636 + chr1 24609562 24609623 340926 444870 U NO +NM_007758_Cr2 chr1 196963005 197003002 - chr1 197057796 197057843 54794 54794 D NO +NM_007768_Crp chr1 174620782 174763152 + chr1 174376470 174376659 244123 244123 D NO +NM_007774_Cryga chr1 65146986 65150012 - chr1 63664888 63665018 1481968 1484994 U NO +NM_007776_Crygd chr1 65108417 65110024 - chr1 63664888 63665018 1443399 1445006 U NO +NM_007777_Cryge chr1 65095133 65097767 - chr1 63664888 63665018 1430115 1432749 U NO +NM_007791_Csrp1 chr1 137526251 137648807 + chr1 136956468 136956598 569653 569653 D NO +NM_007799_Ctse chr1 133534879 133572077 + chr1 133114860 133115015 419864 419864 D NO +NM_007827_Daf2 chr1 132285116 132319576 - chr1 132950929 132951247 631353 631353 D NO +NM_007842_Dhx9 chr1 155302618 155334755 - chr1 155123313 155123435 179183 211320 U NO +NM_007853_Degs1 chr1 184205901 184212915 - chr1 185854947 185855105 1642032 1642032 D NO +NM_007921_Elf3 chr1 137149649 137155139 - chr1 136956468 136956598 193051 198541 U NO +NM_007923_Elk4 chr1 133904204 133929189 + chr1 133114860 133115015 789189 789189 D NO +NM_007936_Epha4 chr1 77280640 77511653 - chr1 77457642 77457791 0 53862 . YES +NM_007955_Ptprv chr1 137004306 137029151 - chr1 136956468 136956598 47708 72553 U NO +NM_007976_F5 chr1 166081877 166150388 + chr1 167222964 167223261 1072576 1141087 U NO +NM_008030_Fmo3 chr1 164883934 164914811 - chr1 164215623 164215935 667999 698876 U NO +NM_008057_Fzd7 chr1 59538966 59546428 + chr1 63664888 63665018 4118460 4125922 U NO +NM_008059_G0s2 chr1 195098362 195108977 - chr1 194957396 194957723 140639 151254 U NO +NM_008131_Glul chr1 155746721 155757023 + chr1 155123313 155123435 623286 623286 D NO +NM_008132_Glrp1 chr1 90396446 90406631 - chr1 90412932 90413132 6301 6301 D NO +NM_008209_Mr1 chr1 156951231 157006024 - chr1 158510523 158510813 1504499 1504499 D NO +NM_008210_H3f3a chr1 182694052 182744054 - chr1 182479646 182479905 214147 264149 U NO +NM_008250_Hlx chr1 186542564 186592227 - chr1 185854947 185855105 687459 737122 U NO +NM_008288_Hsd11b1 chr1 195047814 195090228 - chr1 194957396 194957723 90091 132505 U NO +NM_008299_Dnajb3 chr1 90101307 90102337 - chr1 89989553 89989714 111593 112623 U NO +NM_008311_Htr2b chr1 87995611 88008576 - chr1 88408969 88409267 400393 400393 D NO +NM_008327_Ifi202b chr1 175892699 175912872 - chr1 174376470 174376659 1516040 1536213 U NO +NM_008329_Ifi204 chr1 175677424 175929523 - chr1 174376470 174376659 1300765 1552864 U NO +NM_008342_Igfbp2 chr1 72840313 72899038 + chr1 72815517 72815742 24571 24571 D NO +NM_008362_Il1r1 chr1 40274145 40373439 + chr1 40325917 40326123 0 51772 . YES +NM_008365_Il18r1 chr1 40522407 40557703 + chr1 40325917 40326123 196284 196284 D NO +NM_008384_Inpp1 chr1 52826936 52890006 - chr1 52625416 52625560 201376 264446 U NO +NM_008429_Kcnj9 chr1 174250632 174259434 - chr1 174376470 174376659 117036 117036 D NO +NM_008440_Kif1a chr1 94912041 94998420 - chr1 95186508 95186637 188088 188088 D NO +NM_008484_Lamb3 chr1 195033913 195170047 + chr1 194957396 194957723 76190 76190 D NO +NM_008485_Lamc2 chr1 154969890 155033557 - chr1 154971572 154971673 0 61884 . YES +NM_008510_Xcl1 chr1 166861801 166916999 - chr1 167222964 167223261 305965 305965 D NO +NM_008515_Lrrfip1 chr1 92895314 93025509 + chr1 92070253 92070431 824883 824883 D NO +NM_008534_Ly9 chr1 173518153 173537531 - chr1 174376470 174376659 838939 838939 D NO +NM_008551_Mapkapk2 chr1 132950274 133013820 - chr1 132950929 132951247 0 62573 . YES +NM_008563_Mcm3 chr1 20792654 20810343 - chr1 17030405 17030545 3762109 3779798 U NO +NM_008567_Mcm6 chr1 130228167 130256262 - chr1 132950929 132951247 2694667 2694667 D NO +NM_008575_Mdm4 chr1 134877138 134927144 - chr1 135582677 135582828 655533 655533 D NO +NM_008623_Mpz chr1 173081953 173091254 + chr1 172620917 172621080 460873 460873 D NO +NM_008651_Mybl1 chr1 9635825 9690280 - chr1 9619175 9619382 16443 70898 U NO +NM_008667_Nab1 chr1 52487127 52611216 - chr1 52625416 52625560 14200 14200 D NO +NM_008678_Ncoa2 chr1 13129206 13399268 - chr1 13829227 13829564 429959 429959 D NO +NM_008696_Map4k4 chr1 39958025 40102235 + chr1 40325917 40326123 223682 367892 U NO +NM_008719_Npas2 chr1 39250631 39420071 + chr1 39492140 39492513 72069 241509 U NO +NM_008763_Olfr16 chr1 174886928 174887857 + chr1 174376470 174376659 510269 510269 D NO +NM_008765_Orc2l chr1 58519275 58561933 - chr1 55283572 55283675 3235600 3278258 U NO +NM_008781_Pax3 chr1 78047196 78193701 - chr1 78630893 78631160 437192 437192 D NO +NM_008795_Pctk3 chr1 133972174 134036519 - chr1 133114860 133115015 857159 921504 U NO +NM_008798_Pdcd1 chr1 95931620 95977526 - chr1 95186508 95186637 744983 790889 U NO +NM_008801_Pde6d chr1 88427331 88479102 - chr1 88408969 88409267 18064 69835 U NO +NM_008825_Pfkfb2 chr1 132566787 132625820 - chr1 132950929 132951247 325109 325109 D NO +NM_008866_Lypla1 chr1 4797815 4844373 + chr1 9619046 9619167 4774673 4821231 U NO +NM_008869_Pla2g4a chr1 151661289 151808414 - chr1 154971572 154971673 3163158 3163158 D NO +NM_008882_Plxna2 chr1 196411150 196654445 + chr1 197057796 197057843 403351 646646 U NO +NM_008900_Pou3f3 chr1 42662066 42757055 + chr1 44195449 44195639 1438394 1533383 U NO +NM_008911_Ppox chr1 173200042 173211335 - chr1 172620917 172621080 578962 590255 U NO +NM_008922_Prim2 chr1 33510658 33727287 - chr1 34206924 34207100 479637 479637 D NO +NM_008937_Prox1 chr1 191943166 191999411 - chr1 194258648 194259032 2259237 2259237 D NO +NM_008976_Ptpn14 chr1 191512039 191694746 + chr1 194258648 194259032 2563902 2746609 U NO +NM_008985_Ptprn chr1 75243625 75261057 - chr1 75481920 75482054 220863 220863 D NO +NM_008998_Rab17 chr1 92842177 92905581 - chr1 92070253 92070431 771746 835150 U NO +NM_008999_Rab23 chr1 33776747 33799402 + chr1 34206924 34207100 407522 430177 U NO +NM_009049_Resp18 chr1 75268774 75274970 - chr1 75481920 75482054 206950 206950 D NO +NM_009061_Rgs2 chr1 145846468 145858945 - chr1 145591041 145591176 255292 267769 U NO +NM_009062_Rgs4 chr1 171671620 171743114 - chr1 172620779 172620912 877665 877665 D NO +NM_009063_Rgs5 chr1 171585632 171625107 + chr1 172620779 172620912 995672 1035147 U NO +NM_009107_Rxrg chr1 169399669 169569753 + chr1 170255081 170255260 685328 855412 U NO +NM_009118_Sag chr1 89700275 89741733 + chr1 89989553 89989714 247820 289278 U NO +NM_009126_Serpinb3a chr1 108942184 108948902 - chr1 108747519 108747791 194393 201111 U NO +NM_009129_Scg2 chr1 79431244 79436675 - chr1 78630893 78631160 800084 805515 U NO +NM_009183_St8sia4 chr1 97484259 97672426 - chr1 95186508 95186637 2297622 2485789 U NO +NM_009190_Vps4b chr1 108665873 108739123 - chr1 108747519 108747791 8396 8396 D NO +NM_009208_Slc4a3 chr1 75539833 75564973 + chr1 75481920 75482054 57779 57779 D NO +NM_009230_Soat1 chr1 158354679 158417632 - chr1 158510523 158510813 92891 92891 D NO +NM_009255_Serpine2 chr1 79778648 79891246 - chr1 78630893 78631160 1147488 1260086 U NO +NM_009257_Serpinb5 chr1 108757652 108779925 + chr1 108747519 108747791 9861 9861 D NO +NM_009283_Stat1 chr1 51740305 52218707 + chr1 52625416 52625560 406709 885111 U NO +NM_009307_Syt2 chr1 136543209 136659150 + chr1 136956468 136956598 297318 413259 U NO +NM_009334_Tcfap2b chr1 19198995 19228906 + chr1 17030405 17030545 2168450 2168450 D NO +NM_009352_Terf1 chr1 15785995 15845901 + chr1 17030405 17030545 1184504 1244410 U NO +NM_009355_Tesp1 chr1 34554997 34559905 + chr1 34206924 34207100 347897 347897 D NO +NM_009356_Tesp2 chr1 34594321 34617749 - chr1 34206924 34207100 387221 410649 U NO +NM_009367_Tgfb2 chr1 188337162 188544530 - chr1 185854947 185855105 2482057 2689425 U NO +NM_009399_Tnfrsf11a chr1 107677300 107859295 + chr1 108747519 108747791 888224 1070219 U NO +NM_009407_Tnp1 chr1 73061657 73062512 - chr1 72815517 72815742 245915 246770 U NO +NM_009418_Tpp2 chr1 43936027 44065003 + chr1 44195449 44195639 130446 259422 U NO +NM_009447_Tuba4a chr1 75210818 75219831 - chr1 75481920 75482054 262089 262089 D NO +NM_009452_Tnfsf4 chr1 163212600 163374314 + chr1 163827897 163828062 453583 615297 U NO +NM_009460_Sumo1 chr1 59643412 59727658 - chr1 63664888 63665018 3937230 3937230 D NO +NM_009480_Usf1 chr1 173341335 173348954 + chr1 172620917 172621080 720255 720255 D NO +NM_009509_Vil1 chr1 74455970 74485488 + chr1 75481920 75482054 996432 1025950 U NO +NM_009518_Wnt10a chr1 74838090 74898253 + chr1 75481920 75482054 583667 643830 U NO +NM_009526_Wnt6 chr1 74818493 74831875 + chr1 75481920 75482054 650045 663427 U NO +NM_009533_Xrcc5 chr1 72354001 72453365 + chr1 72769824 72770056 316459 415823 U NO +NM_009539_Zap70 chr1 36818663 36839663 + chr1 36106813 36107058 711605 711605 D NO +NM_009579_Slc30a1 chr1 193730666 193737101 + chr1 194258648 194259032 521547 527982 U NO +NM_009581_Zp3r chr1 132473290 132526179 - chr1 132950929 132951247 424750 424750 D NO +NM_009604_Chrng chr1 89102267 89109269 + chr1 88408969 88409267 693000 693000 D NO +NM_009676_Aox1 chr1 58086687 58165423 + chr1 55283572 55283675 2803012 2803012 D NO +NM_009721_Atp1b1 chr1 166367243 166524675 - chr1 167222964 167223261 698289 698289 D NO +NM_009741_Bcl2 chr1 108362593 108614036 - chr1 108747519 108747791 133483 133483 D NO +NM_009782_Cacna1e chr1 156242220 156916799 - chr1 158510523 158510813 1593724 1593724 D NO +NM_009786_Cacybp chr1 162132500 162143003 - chr1 163827897 163828062 1684894 1684894 D NO +NM_009791_Aspm chr1 141351360 141393207 + chr1 140381656 140381785 969575 969575 D NO +NM_009794_Capn2 chr1 184394108 184479307 - chr1 185854947 185855105 1375640 1375640 D NO +NM_009803_Nr1i3 chr1 173122612 173149661 + chr1 172620917 172621080 501532 501532 D NO +NM_009812_Casp8 chr1 58818409 58904327 + chr1 55283572 55283675 3534734 3534734 D NO +NM_009813_Casq1 chr1 174140028 174150006 - chr1 174376470 174376659 226464 226464 D NO +NM_009826_Rb1cc1 chr1 6196277 6266709 + chr1 9619046 9619167 3352337 3422769 U NO +NM_009843_Ctla4 chr1 60943864 61098205 + chr1 63664888 63665018 2566683 2721024 U NO +NM_009872_Cdk5r2 chr1 74901511 74904288 + chr1 75481920 75482054 577632 580409 U NO +NM_009909_Il8rb chr1 74200075 74207820 + chr1 75481920 75482054 1274100 1281845 U NO +NM_009911_Cxcr4 chr1 130436268 130609324 - chr1 132950929 132951247 2341605 2341605 D NO +NM_009918_Cnga3 chr1 37275192 37321882 + chr1 36106813 36107058 1168134 1168134 D NO +NM_009930_Col3a1 chr1 45368295 45413500 + chr1 44195449 44195639 1172656 1172656 D NO +NM_009938_Copa chr1 174012565 174052450 + chr1 174376470 174376659 324020 363905 U NO +NM_010016_Cd55 chr1 132326379 132359520 - chr1 132950929 132951247 591409 591409 D NO +NM_010043_Des chr1 75356887 75365134 + chr1 75481920 75482054 116786 125033 U NO +NM_010045_Darc chr1 175234342 175263520 - chr1 174376470 174376659 857683 886861 U NO +NM_010094_Lefty1 chr1 182865132 182868532 + chr1 182479646 182479905 385227 385227 D NO +NM_010098_Opn3 chr1 177592560 177622774 - chr1 174376470 174376659 3215901 3246115 U NO +NM_010133_En1 chr1 122494080 122540975 + chr1 120760212 120760461 1733619 1733619 D NO +NM_010135_Enah chr1 183776371 183949877 - chr1 182479646 182479905 1296466 1469972 U NO +NM_010145_Ephx1 chr1 182919689 182951015 - chr1 182479646 182479905 439784 471110 U NO +NM_010164_Eya1 chr1 14117632 14318907 - chr1 13829227 13829564 288068 489343 U NO +NM_010177_Fasl chr1 163710820 163718844 - chr1 163827897 163828062 109053 109053 D NO +NM_010184_Fcer1a chr1 175148098 175157377 - chr1 174376470 174376659 771439 780718 U NO +NM_010185_Fcer1g chr1 173159708 173164476 - chr1 172620917 172621080 538628 543396 U NO +NM_010188_Fcgr3 chr1 172916162 173015807 - chr1 172620917 172621080 295082 394727 U NO +NM_010209_Fh1 chr1 177427308 177555746 - chr1 174376470 174376659 3050649 3179087 U NO +NM_010212_Fhl2 chr1 43179941 43255166 - chr1 44195449 44195639 940283 940283 D NO +NM_010231_Fmo1 chr1 164744557 164796721 - chr1 164215623 164215935 528622 580786 U NO +NM_010233_Fn1 chr1 71632113 71736637 - chr1 72769824 72770056 1033187 1033187 D NO +NM_010262_Gbx2 chr1 91824531 91831059 - chr1 92070253 92070431 239194 239194 D NO +NM_010267_Gdap1 chr1 17135463 17385513 + chr1 17030405 17030545 104918 104918 D NO +NM_010341_Nmur1 chr1 88282479 88297441 - chr1 88408969 88409267 111528 111528 D NO +NM_010472_Agfg1 chr1 82836048 82918151 + chr1 78630893 78631160 4204888 4204888 D NO +NM_010476_Hsd17b7 chr1 171879671 171899542 - chr1 172620779 172620912 721237 721237 D NO +NM_010483_Htr5b chr1 123406263 123425032 - chr1 120760212 120760461 2645802 2664571 U NO +NM_010500_Ier5 chr1 156943491 156946949 - chr1 158510523 158510813 1563574 1563574 D NO +NM_010518_Igfbp5 chr1 72904507 72921468 - chr1 72815517 72815742 88765 105726 U NO +NM_010544_Ihh chr1 74991633 75093213 - chr1 75481920 75482054 388707 388707 D NO +NM_010548_Il10 chr1 132916424 132921547 + chr1 132950929 132951247 29382 34505 U NO +NM_010552_Il17a chr1 20660053 20766059 + chr1 17030405 17030545 3629508 3629508 D NO +NM_010553_Il18rap chr1 40572207 40606867 + chr1 40325917 40326123 246084 246084 D NO +NM_010555_Il1r2 chr1 40130058 40182052 + chr1 40325917 40326123 143865 195859 U NO +NM_010564_Inha chr1 75503647 75506924 + chr1 75481920 75482054 21593 21593 D NO +NM_010566_Inpp5d chr1 89504177 89645401 + chr1 89989553 89989714 344152 485376 U NO +NM_010570_Irs1 chr1 82229682 82233665 + chr1 78630893 78631160 3598522 3598522 D NO +NM_010570_Irs1 chr1 82229686 82300552 - chr1 78630893 78631160 3598526 3669392 U NO +NM_010584_Itln1 chr1 173448254 173495879 - chr1 172620917 172621080 827174 874799 U NO +NM_010600_Kcnh1 chr1 194014507 194368391 + chr1 194258648 194259032 0 244141 . YES +NM_010607_Kcnk2 chr1 191031813 191229415 - chr1 194258648 194259032 3029233 3029233 D NO +NM_010629_Kifap3 chr1 165671988 165847216 + chr1 164215623 164215935 1456053 1456053 D NO +NM_010633_Uhmk1 chr1 172123558 172145524 - chr1 172620779 172620912 475255 475255 D NO +NM_010678_Aff3 chr1 38232856 38782360 - chr1 39492140 39492513 709780 709780 D NO +NM_010683_Lamc1 chr1 155065803 155179906 - chr1 155123313 155123435 0 56471 . YES +NM_010712_Lhx4 chr1 157520057 157598794 - chr1 158510523 158510813 911729 911729 D NO +NM_010732_Lrrn2 chr1 134776870 134865321 + chr1 135582677 135582828 717356 805807 U NO +NM_010766_Marco chr1 122261022 122466383 - chr1 120760212 120760461 1500561 1705922 U NO +NM_010778_Cd46 chr1 196861976 196919007 - chr1 197057796 197057843 138789 138789 D NO +NM_010827_Msc chr1 14520272 14746075 - chr1 13829227 13829564 690708 916511 U NO +NM_010834_Mstn chr1 53118495 53124923 + chr1 52625416 52625560 492935 492935 D NO +NM_010863_Myo1b chr1 51806622 51973696 - chr1 52625416 52625560 651720 651720 D NO +NM_010865_Myoc chr1 164569268 164581467 + chr1 164215623 164215935 353333 353333 D NO +NM_010879_Nck2 chr1 43501442 43627345 + chr1 44195449 44195639 568104 694007 U NO +NM_010880_Ncl chr1 88241155 88255995 - chr1 88408969 88409267 152974 152974 D NO +NM_010892_Nek2 chr1 193645343 193656921 + chr1 194258648 194259032 601727 613305 U NO +NM_010916_Nhlh1 chr1 173982425 173987707 - chr1 174376470 174376659 388763 388763 D NO +NM_010933_Nppc chr1 88512597 88567147 - chr1 88408969 88409267 103330 157880 U NO +NM_011011_Oprk1 chr1 5578025 5596202 + chr1 9619046 9619167 4022844 4041021 U NO +NM_011063_Pea15a chr1 174126043 174136915 - chr1 174376470 174376659 239555 239555 D NO +NM_011066_Per2 chr1 93312559 93386413 - chr1 92070253 92070431 1242128 1315982 U NO +NM_011070_Pfdn2 chr1 173275115 173289384 + chr1 172620917 172621080 654035 654035 D NO +NM_011082_Pigr chr1 132723238 132748826 + chr1 132950929 132951247 202103 227691 U NO +NM_011086_Pikfyve chr1 65225807 65332228 + chr1 63664888 63665018 1560789 1560789 D NO +NM_011111_Serpinb2 chr1 109407675 109422169 + chr1 108747519 108747791 659884 659884 D NO +NM_011198_Ptgs2 chr1 151947054 152026155 + chr1 154971572 154971673 2945417 3024518 U NO +NM_011206_Ptpn18 chr1 34516613 34532568 + chr1 34206924 34207100 309513 309513 D NO +NM_011267_Rgs16 chr1 155574693 155592596 + chr1 155123313 155123435 451258 451258 D NO +NM_011273_Xpr1 chr1 157103002 157264554 - chr1 158510523 158510813 1245969 1245969 D NO +NM_011277_Rnf2 chr1 153305192 153359013 - chr1 154971572 154971673 1612559 1612559 D NO +NM_011283_Rp1 chr1 3989638 4469288 - chr1 9619046 9619167 5149758 5149758 D NO +NM_011318_Apcs chr1 174824092 174855560 - chr1 174376470 174376659 447433 478901 U NO +NM_011345_Sele chr1 165978323 165988607 + chr1 167222964 167223261 1234357 1244641 U NO +NM_011346_Sell chr1 165992132 166007817 + chr1 167222964 167223261 1215147 1230832 U NO +NM_011347_Selp chr1 166045416 166080154 + chr1 167222964 167223261 1142810 1177548 U NO +NM_011439_Sox13 chr1 135278853 135384763 - chr1 135582677 135582828 197914 197914 D NO +NM_011441_Sox17 chr1 4481009 4487839 - chr1 9619046 9619167 5131207 5131207 D NO +NM_011459_Serpinb8 chr1 109486542 109586251 + chr1 108747519 108747791 738751 738751 D NO +NM_011465_Spna1 chr1 176102906 176178561 + chr1 174376470 174376659 1726247 1726247 D NO +NM_011487_Stat4 chr1 52036485 52164030 + chr1 52625416 52625560 461386 588931 U NO +NM_011494_Stk16 chr1 75207414 75212181 + chr1 75481920 75482054 269739 274506 U NO +NM_011541_Tcea1 chr1 4847584 4889703 + chr1 9619046 9619167 4729343 4771462 U NO +NM_011590_Timm17a chr1 137197272 137210335 - chr1 136956468 136956598 240674 253737 U NO +NM_011633_Traf5 chr1 193821096 193916369 - chr1 194258648 194259032 342279 342279 D NO +NM_011650_Tsn chr1 120194658 120208016 - chr1 120760212 120760461 552196 552196 D NO +NM_011729_Ercc5 chr1 44204270 44256568 + chr1 44195449 44195639 8631 8631 D NO +NM_011770_Ikzf2 chr1 69574124 69733875 - chr1 72769824 72770056 3035949 3035949 D NO +NM_011780_Adam23 chr1 63482194 63639230 + chr1 63664888 63665018 25658 182694 U NO +NM_011780_Adam23 chr1 63640970 63642850 + chr1 63664888 63665018 22038 23918 U NO +NM_011785_Akt3 chr1 178940936 179188314 - chr1 181061299 181061446 1872985 1872985 D NO +NM_011794_Bpnt1 chr1 187156058 187181696 + chr1 185854947 185855105 1300953 1300953 D NO +NM_011796_Capn10 chr1 94830953 94844518 + chr1 95186508 95186637 341990 355555 U NO +NM_011800_Cdh20 chr1 106665116 106892058 + chr1 108747519 108747791 1855461 2082403 U NO +NM_011804_Creg1 chr1 167693878 167710825 + chr1 167906284 167906554 195459 212406 U NO +NM_011811_Farsb chr1 78414533 78506689 - chr1 78630893 78631160 124204 124204 D NO +NM_011825_Grem2 chr1 176763926 176859770 - chr1 174376470 174376659 2387267 2483111 U NO +NM_011880_Rgs7 chr1 176989221 177422985 - chr1 174376470 174376659 2612562 3046326 U NO +NM_011882_Rnasel chr1 155596576 155619417 + chr1 155123313 155123435 473141 473141 D NO +NM_011931_Rfwd2 chr1 161159948 161307408 + chr1 159240736 159240866 1919082 1919082 D NO +NM_011935_Esrrg chr1 189432683 190062059 + chr1 185854947 185855105 3577578 3577578 D NO +NM_012009_Sh2d1b1 chr1 172162900 172220030 + chr1 172620779 172620912 400749 457879 U NO +NM_012012_Exo1 chr1 177810732 177841721 + chr1 181061299 181061446 3219578 3250567 U NO +NM_012049_Nit1 chr1 173270709 173276021 - chr1 172620917 172621080 649629 654941 U NO +NM_012058_Srp9 chr1 183988019 184062514 + chr1 182479646 182479905 1508114 1508114 D NO +NM_013474_Apoa2 chr1 173151908 173156502 + chr1 172620917 172621080 530828 530828 D NO +NM_013489_Cd84 chr1 173769848 173820852 + chr1 174376470 174376659 555618 606622 U NO +NM_013499_Cr1l chr1 196924298 196957754 - chr1 197057796 197057843 100042 100042 D NO +NM_013612_Slc11a1 chr1 74421758 74433050 + chr1 75481920 75482054 1048870 1060162 U NO +NM_013626_Pam chr1 99691711 100053468 - chr1 95186508 95186637 4505074 4866831 U NO +NM_013673_Sp100 chr1 84943347 87618694 + chr1 88408969 88409267 790275 3465622 U NO +NM_013715_Cops5 chr1 10014683 10028315 - chr1 9619175 9619382 395301 408933 U NO +NM_013729_Mixl1 chr1 182623184 182634680 - chr1 182479646 182479905 143279 154775 U NO +NM_013730_Slamf1 chr1 173682982 173731471 + chr1 174376470 174376659 644999 693488 U NO +NM_013750_Phlda3 chr1 137662671 137665710 + chr1 136956468 136956598 706073 706073 D NO +NM_013784_Pign chr1 107385512 107560244 - chr1 108747519 108747791 1187275 1187275 D NO +NM_013835_Trove2 chr1 145597816 145624178 - chr1 145591041 145591176 6640 33002 U NO +NM_013862_Rabgap1l chr1 162149308 162739582 - chr1 163827897 163828062 1088315 1088315 D NO +NM_013919_Usp21 chr1 173212080 173218102 - chr1 172620917 172621080 591000 597022 U NO +NM_015750_Neu2 chr1 89348720 89494397 + chr1 89989553 89989714 495156 640833 U NO +NM_015780_Cfhr1 chr1 141443639 141456806 - chr1 140381656 140381785 1061854 1075021 U NO +NM_015811_Rgs1 chr1 146060709 146118313 - chr1 145591041 145591176 469533 527137 U NO +NM_015818_Hs6st1 chr1 36125255 36163289 + chr1 36106813 36107058 18197 18197 D NO +NM_016696_Gpc1 chr1 94728253 94757346 + chr1 95186508 95186637 429162 458255 U NO +NM_016702_Agxt chr1 95031777 95041991 + chr1 95186508 95186637 144517 154731 U NO +NM_016716_Cul3 chr1 80261498 80323399 - chr1 78630893 78631160 1630338 1692239 U NO +NM_016717_Scly chr1 93192544 93217635 + chr1 92070253 92070431 1122113 1122113 D NO +NM_016749_Mybph chr1 136090025 136097809 + chr1 135851853 135852218 237807 237807 D NO +NM_016778_Bok chr1 95579016 95592340 + chr1 95186508 95186637 392379 392379 D NO +NM_016796_Vamp4 chr1 164500371 164532593 + chr1 164215623 164215935 284436 284436 D NO +NM_016805_Hnrnpu chr1 180251245 180298730 - chr1 181061299 181061446 762569 762569 D NO +NM_016846_Rgl1 chr1 154357421 154613475 - chr1 154971572 154971673 358097 358097 D NO +NM_016851_Irf6 chr1 194979326 194998230 + chr1 194957396 194957723 21603 21603 D NO +NM_016894_Ramp1 chr1 93076419 93120251 + chr1 92070253 92070431 1005988 1005988 D NO +NM_016894_Ramp1 chr1 93120257 93121772 + chr1 92070253 92070431 1049826 1049826 D NO +NM_016916_Blcap chr1 46068602 46087314 - chr1 44195449 44195639 1872963 1891675 U NO +NM_016917_Slc40a1 chr1 45964925 45999090 - chr1 44195449 44195639 1769286 1803451 U NO +NM_016923_Ly96 chr1 16678152 16699618 + chr1 17030405 17030545 330787 352253 U NO +NM_016928_Tlr5 chr1 184884929 184903333 + chr1 185854947 185855105 951614 970018 U NO +NM_016960_Ccl20 chr1 83112527 83138624 + chr1 78630893 78631160 4481367 4481367 D NO +NM_017480_Icos chr1 61034747 61057162 + chr1 63664888 63665018 2607726 2630141 U NO +NM_018729_Cd244 chr1 173481630 173515439 + chr1 172620917 172621080 860550 860550 D NO +NM_018750_Rassf5 chr1 133072991 133144761 - chr1 133114860 133115015 0 29746 . YES +NM_018775_Tbc1d8 chr1 39428350 39544345 - chr1 39492140 39492513 0 51832 . YES +NM_018796_Eef1b2 chr1 63221360 63227060 + chr1 63664888 63665018 437828 443528 U NO +NM_018817_Smarcal1 chr1 72629842 72679806 + chr1 72769824 72770056 90018 139982 U NO +NM_018868_Nop58 chr1 59741819 59769026 + chr1 63664888 63665018 3895862 3923069 U NO +NM_018872_Tmem131 chr1 36841788 37000491 - chr1 36106813 36107058 734730 893433 U NO +NM_018881_Fmo2 chr1 164804452 164828875 - chr1 164215623 164215935 588517 612940 U NO +NM_019432_Tmem37 chr1 121962801 121979194 - chr1 120760212 120760461 1202340 1218733 U NO +NM_019445_Fmn2 chr1 176431685 176752860 + chr1 174376470 174376659 2055026 2055026 D NO +NM_019479_Hes6 chr1 93308097 93310595 - chr1 92070253 92070431 1237666 1240164 U NO +NM_019484_Refbp2 chr1 173433397 173434881 + chr1 172620917 172621080 812317 812317 D NO +NM_019562_Uchl5 chr1 145623774 145654586 + chr1 145591041 145591176 32598 32598 D NO +NM_019570_Rev1 chr1 38109638 38186507 - chr1 39492140 39492513 1305633 1305633 D NO +NM_019645_Pkp1 chr1 137767972 137815881 - chr1 138437726 138437860 621845 621845 D NO +NM_019685_Ruvbl1 chr1 141824644 141826247 - chr1 140381656 140381785 1442859 1444462 U NO +NM_019759_Dpt chr1 166726785 166754377 + chr1 167222964 167223261 468587 496179 U NO +NM_019777_Ikbke chr1 133151052 133176163 - chr1 133114860 133115015 36037 61148 U NO +NM_019790_Tmeff2 chr1 50957501 51282275 + chr1 52625416 52625560 1343141 1667915 U NO +NM_019933_Ptpn4 chr1 121556050 121771541 - chr1 120760212 120760461 795589 1011080 U NO +NM_019993_Aldh9a1 chr1 169280142 169298663 + chr1 170255081 170255260 956418 974939 U NO +NM_020025_B3galt2 chr1 145487786 145497516 + chr1 145591041 145591176 93525 103255 U NO +NM_020579_B4galt3 chr1 173199650 173207025 + chr1 172620917 172621080 578570 578570 D NO +NM_020588_Tmem183a chr1 136242675 136258707 - chr1 135851853 135852218 390457 406489 U NO +NM_020604_Jph1 chr1 16837549 17087942 - chr1 17030405 17030545 0 57397 . YES +NM_021285_Myl1 chr1 66948125 66992032 - chr1 63664888 63665018 3283107 3327014 U NO +NM_021295_Lancl1 chr1 67004053 67085447 - chr1 63664888 63665018 3339035 3420429 U NO +NM_021306_Ecel1 chr1 89039384 89053076 - chr1 88408969 88409267 630117 643809 U NO +NM_021312_Wdr12 chr1 60099363 60155552 - chr1 63664888 63665018 3509336 3509336 D NO +NM_021313_Rnf25 chr1 74640329 74648026 - chr1 75481920 75482054 833894 833894 D NO +NM_021342_Kcne4 chr1 78791793 78816579 + chr1 78630893 78631160 160633 160633 D NO +NM_021350_Chml chr1 177615948 177618649 - chr1 174376470 174376659 3239289 3241990 U NO +NM_021374_Rgs20 chr1 4899617 5060346 - chr1 9619046 9619167 4558700 4558700 D NO +NM_021380_Il20 chr1 132803344 132808275 - chr1 132950929 132951247 142654 142654 D NO +NM_021383_Rqcd1 chr1 74542393 74577404 + chr1 75481920 75482054 904516 939527 U NO +NM_021400_Prg4 chr1 152296956 152333784 - chr1 154971572 154971673 2637788 2637788 D NO +NM_021408_Ush2a chr1 190085902 190292167 + chr1 194258648 194259032 3966481 4172746 U NO +NM_021421_Angel2 chr1 192748297 192770827 + chr1 194258648 194259032 1487821 1510351 U NO +NM_021433_Stx6 chr1 157005819 157054716 + chr1 158510523 158510813 1455807 1504704 U NO +NM_021467_Tnni1 chr1 137676021 137713725 + chr1 136956468 136956598 719423 719423 D NO +NM_021511_Rrs1 chr1 9535513 9537532 + chr1 9619046 9619167 81514 83533 U NO +NM_021537_Stk25 chr1 95517348 95555233 - chr1 95186508 95186637 330711 368596 U NO +NM_021541_Cryba2 chr1 74936508 74939802 - chr1 75481920 75482054 542118 542118 D NO +NM_021600_Chrnd chr1 89087192 89096645 + chr1 88408969 88409267 677925 677925 D NO +NM_021605_Nek7 chr1 140379472 140516775 - chr1 140381656 140381785 0 134990 . YES +NM_021607_Ncstn chr1 173996154 174012927 - chr1 174376470 174376659 363543 363543 D NO +NM_021610_Gpa33 chr1 168060559 168118074 + chr1 167906284 167906554 154005 154005 D NO +NM_022018_Fam129a chr1 153370940 153589282 + chr1 154971572 154971673 1382290 1600632 U NO +NM_022019_Dusp10 chr1 185755009 185899515 + chr1 185854947 185855105 0 99938 . YES +NM_022312_Tnr chr1 161327058 161857057 + chr1 159240736 159240866 2086192 2086192 D NO +NM_022320_Gpr35 chr1 94683531 94882968 + chr1 95186508 95186637 303540 502977 U NO +NM_022327_Ralb chr1 121363651 121401351 - chr1 120760212 120760461 603190 640890 U NO +NM_022329_Ifrg15 chr1 157883344 157900866 + chr1 158510523 158510813 609657 627179 U NO +NM_022417_Itm2c chr1 87780787 87838221 + chr1 88408969 88409267 570748 628182 U NO +NM_022563_Ddr2 chr1 171907607 172040752 - chr1 172620779 172620912 580027 580027 D NO +NM_022721_Fzd5 chr1 64777130 64826549 - chr1 63664888 63665018 1112112 1161531 U NO +NM_022881_Rgs18 chr1 146599793 146755382 - chr1 145591041 145591176 1008617 1164206 U NO +NM_022988_Nif3l1 chr1 58501750 58538650 + chr1 55283572 55283675 3218075 3218075 D NO +NM_023041_Pex19 chr1 174056859 174067189 + chr1 174376470 174376659 309281 319611 U NO +NM_023141_Tor3a chr1 158583760 158604477 - chr1 158580638 158580759 3001 23718 U NO +NM_023173_Dusp12 chr1 172803629 172815650 - chr1 172620917 172621080 182549 194570 U NO +NM_023200_Ppp1r7 chr1 95239431 95266345 + chr1 95186508 95186637 52794 52794 D NO +NM_023284_Nuf2 chr1 171386224 171461676 - chr1 172620779 172620912 1159103 1159103 D NO +NM_023314_Eif4e2 chr1 89110486 89145136 + chr1 88408969 88409267 701219 701219 D NO +NM_023341_Cabc1 chr1 182095369 182129713 - chr1 182479646 182479905 349933 349933 D NO +NM_023343_Ilkap chr1 93270445 93290447 - chr1 92070253 92070431 1200014 1220016 U NO +NM_023434_Tox4 chr1 16757104 16760219 - chr1 17030405 17030545 270186 270186 D NO +NM_023514_Mrps9 chr1 42760822 42962528 + chr1 44195449 44195639 1232921 1434627 U NO +NM_023523_Pecr chr1 72281105 72330878 - chr1 72769824 72770056 438946 438946 D NO +NM_023617_Aox3 chr1 58169980 58259027 + chr1 55283572 55283675 2886305 2886305 D NO +NM_023631_Aox4 chr1 58267261 58325441 + chr1 55283572 55283675 2983586 2983586 D NO +NM_023645_Kdelc1 chr1 44143458 44177102 - chr1 44195449 44195639 18347 18347 D NO +NM_023727_Rd3 chr1 193784705 193812153 + chr1 194258648 194259032 446495 473943 U NO +NM_023732_Abcb6 chr1 75168223 75177000 - chr1 75481920 75482054 304920 304920 D NO +NM_023755_Tcfcp2l1 chr1 120524515 120655075 + chr1 120760212 120760461 105137 235697 U NO +NM_023884_Ralgps2 chr1 158734300 158969600 - chr1 158835251 158835391 0 134209 . YES +NM_024197_Ndufa10 chr1 94121208 94393553 - chr1 95186508 95186637 792955 792955 D NO +NM_024264_Cyp27a1 chr1 74759770 74786412 + chr1 75481920 75482054 695508 722150 U NO +NM_024282_Pppde1 chr1 180117558 180197483 + chr1 181061299 181061446 863816 943741 U NO +NM_024283_1500015O10Rik chr1 43787414 43799399 + chr1 44195449 44195639 396050 408035 U NO +NM_025283_Mobkl3 chr1 55187734 55211736 + chr1 55283572 55283675 71836 95838 U NO +NM_025300_Mrpl15 chr1 4763290 4798011 - chr1 9619046 9619167 4821035 4821035 D NO +NM_025303_Stau2 chr1 16218775 16510193 - chr1 17030405 17030545 520212 520212 D NO +NM_025321_Sdhc chr1 173057297 173080736 - chr1 172620917 172621080 436217 459656 U NO +NM_025386_Fbxo36 chr1 84835492 84897059 + chr1 88408969 88409267 3511910 3573477 U NO +NM_025388_Ufc1 chr1 173218698 173225135 - chr1 172620917 172621080 597618 604055 U NO +NM_025424_Nenf chr1 193130454 193141997 - chr1 194258648 194259032 1116651 1116651 D NO +NM_025439_Tmem9 chr1 137879942 137931919 + chr1 138437726 138437860 505807 557784 U NO +NM_025453_Tm4sf20 chr1 82749860 82765031 - chr1 78630893 78631160 4118700 4133871 U NO +NM_025454_Ing5 chr1 95700534 95719794 + chr1 95186508 95186637 513897 513897 D NO +NM_025470_1810030J14Rik chr1 176260650 176349219 + chr1 174376470 174376659 1883991 1883991 D NO +NM_025474_Mrps14 chr1 162082365 162131317 + chr1 163827897 163828062 1696580 1745532 U NO +NM_025505_Blzf1 chr1 166219931 166237615 - chr1 167222964 167223261 985349 985349 D NO +NM_025557_Pcp4l1 chr1 173103394 173126370 - chr1 172620917 172621080 482314 505290 U NO +NM_025569_Mgst3 chr1 169302037 169323952 - chr1 170255081 170255260 931129 931129 D NO +NM_025596_Prelid1 chr1 63410974 63469460 - chr1 63664888 63665018 195428 195428 D NO +NM_025597_Ndufb3 chr1 58631453 58653239 + chr1 55283572 55283675 3347778 3347778 D NO +NM_025677_Tsen15 chr1 154217920 154233812 - chr1 154971572 154971673 737760 737760 D NO +NM_025683_Rpe chr1 66747223 66839854 + chr1 63664888 63665018 3082205 3082205 D NO +NM_025746_4933415F23Rik chr1 23107346 23263222 - chr1 24609562 24609623 1346340 1346340 D NO +NM_025773_Ube2w chr1 16530881 16609419 - chr1 17030405 17030545 420986 420986 D NO +NM_025784_Bcs1l chr1 74634010 74639375 + chr1 75481920 75482054 842545 847910 U NO +NM_025819_1200016B10Rik chr1 153214763 153304502 - chr1 154971572 154971673 1667070 1667070 D NO +NM_025864_Tmem206 chr1 193149566 193176819 + chr1 194258648 194259032 1081829 1109082 U NO +NM_025867_Serpinb11 chr1 109246610 109277052 + chr1 108747519 108747791 498819 498819 D NO +NM_025920_Thap4 chr1 95602021 95651542 - chr1 95186508 95186637 415384 464905 U NO +NM_025964_Fam119a chr1 64653048 64670990 - chr1 63664888 63665018 988030 1005972 U NO +NM_026024_Ube2t chr1 136857731 136870739 + chr1 136956468 136956598 85729 98737 U NO +NM_026041_Rrp15 chr1 188544857 188573732 - chr1 185854947 185855105 2689752 2718627 U NO +NM_026078_Pigc chr1 163860747 163957217 + chr1 163827897 163828062 32685 32685 D NO +NM_026123_Unc50 chr1 37486671 37504876 + chr1 36106813 36107058 1379613 1379613 D NO +NM_026171_Nvl chr1 183008557 183074318 - chr1 182479646 182479905 528652 594413 U NO +NM_026187_Ankzf1 chr1 75188977 75192143 + chr1 75481920 75482054 289777 292943 U NO +NM_026187_Ankzf1 chr1 75192524 75195962 + chr1 75481920 75482054 285958 289396 U NO +NM_026195_Atic chr1 71584010 71626205 + chr1 72769824 72770056 1143619 1185814 U NO +NM_026234_Pigm chr1 174306609 174314210 + chr1 174376470 174376659 62260 69861 U NO +NM_026241_Ankrd39 chr1 36594353 36604077 - chr1 36106813 36107058 487295 497019 U NO +NM_026250_Zh2c2 chr1 99658035 99706130 + chr1 95186508 95186637 4471398 4471398 D NO +NM_026321_Fam174a chr1 97174825 97346168 + chr1 95186508 95186637 1988188 1988188 D NO +NM_026367_Gpatch2 chr1 189010707 189180483 + chr1 185854947 185855105 3155602 3155602 D NO +NM_026369_Arpc5 chr1 154613024 154638792 + chr1 154971572 154971673 332780 358548 U NO +NM_026375_Ahctf1 chr1 181675025 181733948 - chr1 181061299 181061446 613579 672502 U NO +NM_026380_Rgs8 chr1 155468581 155563679 + chr1 155123313 155123435 345146 345146 D NO +NM_026390_Ubxn4 chr1 130140557 130175951 + chr1 132950929 132951247 2774978 2810372 U NO +NM_026430_Uxs1 chr1 43804890 43884625 - chr1 44195449 44195639 310824 310824 D NO +NM_026454_Ube2f chr1 93146888 93187187 + chr1 92070253 92070431 1076457 1076457 D NO +NM_026456_Tceb1 chr1 16603307 16655630 - chr1 17030405 17030545 374775 374775 D NO +NM_026472_Mki67ip chr1 120218436 120230401 + chr1 120760212 120760461 529811 541776 U NO +NM_026493_Cspp1 chr1 10028093 10126849 + chr1 9619175 9619382 408711 408711 D NO +NM_026500_Ddx59 chr1 138242798 138336799 + chr1 138437726 138437860 100927 194928 U NO +NM_026503_1110058L19Rik chr1 24002785 24017210 - chr1 24609562 24609623 592352 592352 D NO +NM_026626_Efcab2 chr1 180335927 180414624 + chr1 181061299 181061446 646675 725372 U NO +NM_026680_Golt1a chr1 135206322 135226478 + chr1 135582677 135582828 356199 376355 U NO +NM_026713_Mogat1 chr1 78496730 78564215 + chr1 78630893 78631160 66678 134163 U NO +NM_026719_Lmbrd1 chr1 24593456 24847969 + chr1 24609562 24609623 0 16106 . YES +NM_026719_Lmbrd1 chr1 24820582 24823143 + chr1 24730996 24731077 89505 89505 D NO +NM_026725_Dusp23 chr1 174560902 174563119 - chr1 174376470 174376659 184243 186460 U NO +NM_026796_Smyd2 chr1 191704373 191746222 - chr1 194258648 194259032 2512426 2512426 D NO +NM_026823_Arl8a chr1 137043216 137053347 + chr1 136956468 136956598 86618 86618 D NO +NM_026846_Zfand2b chr1 75165237 75168196 + chr1 75481920 75482054 313724 316683 U NO +NM_026850_Pdcl3 chr1 39044622 39054081 + chr1 39492140 39492513 438059 447518 U NO +NM_026913_Mitd1 chr1 37931656 37947242 - chr1 39492140 39492513 1544898 1544898 D NO +NM_026977_1810031K17Rik chr1 75131500 75139270 - chr1 75481920 75482054 342650 342650 D NO +NM_027098_Mrpl30 chr1 37947313 37959167 + chr1 39492140 39492513 1532973 1544827 U NO +NM_027154_Tmbim1 chr1 74334823 74352176 - chr1 75481920 75482054 1129744 1129744 D NO +NM_027159_Ccdc115 chr1 34491854 34496517 - chr1 34206924 34207100 284754 289417 U NO +NM_027188_Smyd3 chr1 180885172 181448168 - chr1 181061299 181061446 0 386722 . YES +NM_027300_Spata3 chr1 87913403 87926533 + chr1 88408969 88409267 482436 495566 U NO +NM_027351_Ppil3 chr1 58486110 58502330 - chr1 55283572 55283675 3202435 3218655 U NO +NM_027357_Psmd1 chr1 87958636 88174849 + chr1 88408969 88409267 234120 450333 U NO +NM_027407_Ica1l chr1 60039354 60099956 - chr1 63664888 63665018 3564932 3564932 D NO +NM_027415_Tmem70 chr1 16610621 16668358 + chr1 17030405 17030545 362047 419784 U NO +NM_027430_Brp44 chr1 167390752 167411345 + chr1 167222964 167223261 167491 167491 D NO +NM_027534_Kdsr chr1 108617007 108656357 - chr1 108747519 108747791 91162 91162 D NO +NM_027548_Serpinb7 chr1 109296172 109349266 + chr1 108747519 108747791 548381 548381 D NO +NM_027551_Klhl30 chr1 93244259 93259068 + chr1 92070253 92070431 1173828 1173828 D NO +NM_027637_4931428L18Rik chr1 31197921 31279501 - chr1 34206924 34207100 2927423 2927423 D NO +NM_027661_Hsfy2 chr1 56668158 56822175 - chr1 55283572 55283675 1384483 1538500 U NO +NM_027677_Gpr39 chr1 127573518 127795359 + chr1 132950929 132951247 5155570 5377411 U NO +NM_027678_Zranb3 chr1 129846941 130025531 - chr1 132950929 132951247 2925398 2925398 D NO +NM_027725_Wdr69 chr1 83156310 83207145 + chr1 78630893 78631160 4525150 4525150 D NO +NM_027884_Tns1 chr1 73956820 74144891 - chr1 72815517 72815742 1141078 1329149 U NO +NM_027886_Stk11ip chr1 75518100 75533910 + chr1 75481920 75482054 36046 36046 D NO +NM_027893_Pvrl4 chr1 173292993 173318729 + chr1 172620917 172621080 671913 671913 D NO +NM_027921_Slc16a14 chr1 84902046 84931841 - chr1 88408969 88409267 3477128 3477128 D NO +NM_027971_Serpinb12 chr1 108831026 108853655 + chr1 108747519 108747791 83235 83235 D NO +NM_027979_Chit1 chr1 136007829 136048117 + chr1 135851853 135852218 155611 155611 D NO +NM_028057_Cyb5r1 chr1 136302358 136308302 + chr1 135851853 135852218 450140 450140 D NO +NM_028091_Osgepl1 chr1 53370488 53383184 + chr1 52625416 52625560 744928 744928 D NO +NM_028135_Tmem163 chr1 129382910 129574703 - chr1 132950929 132951247 3376226 3376226 D NO +NM_028173_Tram1 chr1 13554779 13579965 - chr1 13829227 13829564 249262 249262 D NO +NM_028250_Acbd6 chr1 157358146 157536633 + chr1 158510523 158510813 973890 1152377 U NO +NM_028320_Adipor1 chr1 136311830 136329944 + chr1 135851853 135852218 459612 459612 D NO +NM_028333_Angptl1 chr1 158769061 158791209 + chr1 158835251 158835391 44042 66190 U NO +NM_028399_Ccnt2 chr1 129670253 129704638 + chr1 132950929 132951247 3246291 3280676 U NO +NM_028408_Cnih3 chr1 183282759 183419790 + chr1 182479646 182479905 802854 802854 D NO +NM_028450_Gulp1 chr1 44608366 44896390 + chr1 44195449 44195639 412727 412727 D NO +NM_028534_Smap1 chr1 23833022 23929292 - chr1 24609562 24609623 680270 680270 D NO +NM_028696_Obfc2a chr1 51417024 51550602 - chr1 52625416 52625560 1074814 1074814 D NO +NM_028713_Rftn2 chr1 55227030 55283748 - chr1 55283572 55283675 0 73 . YES +NM_028717_Als2 chr1 59219131 59294111 - chr1 55283572 55283675 3935456 4010436 U NO +NM_028749_Npl chr1 155350145 155424001 - chr1 155123313 155123435 226710 300566 U NO +NM_028776_Scyl3 chr1 165859251 165885242 + chr1 167222964 167223261 1337722 1363713 U NO +NM_028776_Scyl3 chr1 165876143 165924907 - chr1 167222964 167223261 1298057 1298057 D NO +NM_028778_Nuak2 chr1 134212715 134241254 + chr1 133114860 133115015 1097700 1097700 D NO +NM_028787_Slc35f5 chr1 127332249 127554856 + chr1 132950929 132951247 5396073 5618680 U NO +NM_028817_Acsl3 chr1 78654388 78743434 + chr1 78630893 78631160 23228 23228 D NO +NM_028829_Paqr8 chr1 20811519 20929711 + chr1 17030405 17030545 3780974 3780974 D NO +NM_028848_Spata17 chr1 188868366 189039831 - chr1 185854947 185855105 3013261 3184726 U NO +NM_028889_Efhd1 chr1 89160561 89207413 + chr1 88408969 88409267 751294 751294 D NO +NM_028942_Slco6c1 chr1 98899133 99024880 - chr1 95186508 95186637 3712496 3838243 U NO +NM_029025_Tmem81 chr1 134402623 134405216 + chr1 135582677 135582828 1177461 1180054 U NO +NM_029084_Slamf8 chr1 174510275 174520700 - chr1 174376470 174376659 133616 144041 U NO +NM_029115_4930455F23Rik chr1 166205721 166217973 + chr1 167222964 167223261 1004991 1017243 U NO +NM_029160_Spag16 chr1 69873526 70771706 + chr1 72769824 72770056 1998118 2896298 U NO +NM_029269_Spp2 chr1 90303568 90373213 + chr1 90412932 90413132 39719 109364 U NO +NM_029398_Tmem14a chr1 21143538 21220248 + chr1 24609562 24609623 3389314 3466024 U NO +NM_029409_Mff chr1 82721393 82748958 + chr1 78630893 78631160 4090233 4090233 D NO +NM_029612_Slamf9 chr1 174392516 174408706 + chr1 174376470 174376659 15857 15857 D NO +NM_029696_Mdh1b chr1 63745401 63776894 - chr1 63664888 63665018 80383 111876 U NO +NM_029756_Sdccag8 chr1 178743478 178953256 + chr1 181061299 181061446 2108043 2317821 U NO +NM_029766_Dtl chr1 193272523 193399423 - chr1 194258648 194259032 859225 859225 D NO +NM_029846_Atg16l1 chr1 89652465 89697344 + chr1 89989553 89989714 292209 337088 U NO +NM_029888_Zfp142 chr1 74612492 74634794 - chr1 75481920 75482054 847126 847126 D NO +NM_030013_Cyp20a1 chr1 60400175 60444904 + chr1 63664888 63665018 3219984 3264713 U NO +NM_030025_Ccdc150 chr1 54251865 54451794 + chr1 54631692 54631815 179898 379827 U NO +NM_030060_Batf3 chr1 192921746 192944913 + chr1 194258648 194259032 1313735 1336902 U NO +NM_030131_Cnih4 chr1 183074401 183099213 + chr1 182479646 182479905 594496 594496 D NO +NM_030211_Kctd18 chr1 58007830 58075790 - chr1 55283572 55283675 2724155 2792115 U NO +NM_030245_Tada1l chr1 168309248 168323752 + chr1 167906284 167906554 402694 402694 D NO +NM_030266_Inpp4a chr1 37356703 37476203 + chr1 36106813 36107058 1249645 1249645 D NO +NM_030556_Slc19a3 chr1 83001155 83083196 - chr1 78630893 78631160 4369995 4452036 U NO +NM_030676_Nr5a2 chr1 138739149 138950879 - chr1 138437726 138437860 301289 513019 U NO +NM_030710_Slamf6 chr1 173847613 173932462 + chr1 174376470 174376659 444008 528857 U NO +NM_030724_Uck2 chr1 169106790 169215431 - chr1 170255081 170255260 1039650 1039650 D NO +NM_031164_F13b chr1 141398326 141420329 + chr1 140381656 140381785 1016541 1016541 D NO +NM_031179_Sf3b1 chr1 55042016 55084369 - chr1 55283572 55283675 199203 199203 D NO +NM_031189_Myog chr1 136186558 136189125 + chr1 135851853 135852218 334340 334340 D NO +NM_031192_Ren1 chr1 135246578 135256895 + chr1 135582677 135582828 325782 336099 U NO +NM_031402_Crispld1 chr1 17717123 17756425 + chr1 17030405 17030545 686578 686578 D NO +NM_032005_Tbx19 chr1 167056323 167090894 - chr1 167222964 167223261 132070 132070 D NO +NM_033077_D1Pas1 chr1 188791295 188934742 + chr1 185854947 185855105 2936190 2936190 D NO +NM_033509_Vangl2 chr1 173931096 173977129 - chr1 174376470 174376659 399341 399341 D NO +NM_033563_Klf7 chr1 64049920 64169179 - chr1 63664888 63665018 384902 504161 U NO +NM_033570_Cnnm4 chr1 36528452 36565609 + chr1 36106813 36107058 421394 421394 D NO +NM_033608_Igsf9 chr1 174411686 174429005 + chr1 174376470 174376659 35027 35027 D NO +NM_033652_Lmx1a chr1 169579767 169778872 + chr1 170255081 170255260 476209 675314 U NO +NM_053015_Mlph chr1 92811657 92847814 + chr1 92070253 92070431 741226 741226 D NO +NM_053095_Il24 chr1 132778072 132784021 - chr1 132950929 132951247 166908 166908 D NO +NM_053106_Lmod1 chr1 137221395 137264642 + chr1 136956468 136956598 264797 264797 D NO +NM_053107_Gpr45 chr1 43009719 43092301 + chr1 44195449 44195639 1103148 1185730 U NO +NM_053191_Pi15 chr1 17591992 17621000 + chr1 17030405 17030545 561447 561447 D NO +NM_053199_Cadm3 chr1 175264723 175362523 - chr1 174376470 174376659 888064 985864 U NO +NM_053257_Rpl31 chr1 39421000 39429094 + chr1 39492140 39492513 63046 71140 U NO +NM_053270_Rims1 chr1 22275987 22813178 - chr1 24609562 24609623 1796384 1796384 D NO +NM_054076_Optc chr1 135787973 135805299 - chr1 135851853 135852218 46554 46554 D NO +NM_054077_Prelp chr1 135806855 135865173 - chr1 135851853 135852218 0 12955 . YES +NM_054087_Slc19a2 chr1 166178694 166196022 + chr1 167222964 167223261 1026942 1044270 U NO +NM_054102_Ivns1abp chr1 153196503 153212127 + chr1 154971572 154971673 1759445 1775069 U NO +NM_080419_Igsf8 chr1 174191772 174249967 + chr1 174376470 174376659 126503 184698 U NO +NM_080844_Serpinc1 chr1 162908738 162946004 + chr1 163827897 163828062 881893 919159 U NO +NM_080850_Pask chr1 95205357 95240039 - chr1 95186508 95186637 18720 53402 U NO +NM_130456_Nphs2 chr1 158233397 158258162 + chr1 158510523 158510813 252361 277126 U NO +NM_130890_Capn8 chr1 184489366 184629001 + chr1 185854947 185855105 1225946 1365581 U NO +NM_133193_Il1rl2 chr1 40381454 40447345 + chr1 40325917 40326123 55331 55331 D NO +NM_133220_Sgk3 chr1 9787936 9890911 + chr1 9619175 9619382 168554 168554 D NO +NM_133225_Acbd3 chr1 182654006 182684317 + chr1 182479646 182479905 174101 174101 D NO +NM_133235_Khdrbs2 chr1 32113056 32771277 + chr1 34206924 34207100 1435647 2093868 U NO +NM_133239_Crb1 chr1 141093643 141296750 - chr1 140381656 140381785 711858 914965 U NO +NM_133252_Tram2 chr1 20984161 21069306 - chr1 24609562 24609623 3540256 3540256 D NO +NM_133358_Zfp617 chr1 87909957 87912999 - chr1 88408969 88409267 495970 495970 D NO +NM_133664_Lad1 chr1 137715163 137730085 + chr1 138437726 138437860 707641 722563 U NO +NM_133684_Mosc2 chr1 186636947 186687141 - chr1 185854947 185855105 781842 832036 U NO +NM_133705_Pycr2 chr1 182834431 182850616 + chr1 182479646 182479905 354526 354526 D NO +NM_133728_Asnsd1 chr1 53382361 53409576 - chr1 52625416 52625560 756801 784016 U NO +NM_133748_Insig2 chr1 123200933 123229157 - chr1 120760212 120760461 2440472 2468696 U NO +NM_133780_Tpr chr1 152239968 152298193 + chr1 154971572 154971673 2673379 2731604 U NO +NM_133781_Cab39 chr1 87687678 87748148 + chr1 88408969 88409267 660821 721291 U NO +NM_133805_Cops8 chr1 92499556 92564446 + chr1 92070253 92070431 429125 429125 D NO +NM_133806_Uap1 chr1 172007106 172105098 - chr1 172620779 172620912 515681 515681 D NO +NM_133808_Hdlbp chr1 95302520 95375513 - chr1 95186508 95186637 115883 188876 U NO +NM_133809_Kmo chr1 177550532 177592237 + chr1 174376470 174376659 3173873 3173873 D NO +NM_133810_Stk17b chr1 53812356 53857070 - chr1 54631692 54631815 774622 774622 D NO +NM_133815_Lbr chr1 183737722 183773157 - chr1 182479646 182479905 1257817 1293252 U NO +NM_133816_Sh3bp4 chr1 90966984 91051778 + chr1 90592499 90592629 374355 374355 D NO +NM_133817_Zfp451 chr1 33817052 33871530 - chr1 34206924 34207100 335394 335394 D NO +NM_133819_Ppp1r15b chr1 135027595 135036355 + chr1 135582677 135582828 546322 555082 U NO +NM_133826_Atp6v1h chr1 5060109 5173662 + chr1 9619046 9619167 4445384 4558937 U NO +NM_133828_Creb1 chr1 64579391 64645546 + chr1 63664888 63665018 914373 914373 D NO +NM_133828_Creb1 chr1 64646684 64649524 + chr1 63664888 63665018 981666 981666 D NO +NM_133829_Mfsd6 chr1 52702101 52784383 - chr1 52625416 52625560 76541 158823 U NO +NM_133832_Rdh10 chr1 16095419 16123815 + chr1 17030405 17030545 906590 934986 U NO +NM_133975_Trip12 chr1 84717781 84836834 - chr1 88408969 88409267 3572135 3572135 D NO +NM_134252_Trpm8 chr1 90181363 90285482 + chr1 89989553 89989714 191649 191649 D NO +NM_134438_Gpr37l1 chr1 137054243 137069087 - chr1 136956468 136956598 97645 112489 U NO +NM_134448_Dst chr1 33965107 34411632 + chr1 34206924 34207100 0 241817 . YES +NM_138314_Nme7 chr1 166237503 166369483 + chr1 167222964 167223261 853481 985461 U NO +NM_138741_Sdpr chr1 51345970 51359791 + chr1 52625416 52625560 1265625 1279446 U NO +NM_139146_Satb2 chr1 56850830 57044309 - chr1 55283572 55283675 1567155 1760634 U NO +NM_139150_Carf chr1 60155057 60208366 + chr1 63664888 63665018 3456522 3509831 U NO +NM_139152_Asb18 chr1 91849253 91911152 - chr1 92070253 92070431 159101 159101 D NO +NM_139270_Pth2r chr1 65328648 65436194 + chr1 63664888 63665018 1663630 1663630 D NO +NM_144530_Zc3h11a chr1 135516445 135557956 - chr1 135582677 135582828 24721 24721 D NO +NM_144539_Slamf7 chr1 173562534 173583396 - chr1 174376470 174376659 793074 793074 D NO +NM_144558_Bivm chr1 44175822 44201615 + chr1 44195449 44195639 0 19627 . YES +NM_144559_Fcgr4 chr1 172925278 172974678 + chr1 172620917 172621080 304198 304198 D NO +NM_144761_Crygb chr1 65126809 65127141 - chr1 63664888 63665018 1461791 1462123 U NO +NM_144791_Tor1aip1 chr1 157851734 157889804 - chr1 158510523 158510813 620719 620719 D NO +NM_144794_Tmem63a chr1 182872430 182919700 + chr1 182479646 182479905 392525 392525 D NO +NM_144796_Susd4 chr1 184694011 184850523 + chr1 185854947 185855105 1004424 1160936 U NO +NM_144810_Klhdc8a chr1 134182914 134204342 + chr1 133114860 133115015 1067899 1067899 D NO +NM_144814_Rcor3 chr1 193910981 193962565 - chr1 194258648 194259032 296083 296083 D NO +NM_144817_Camk1g chr1 195172540 195216632 - chr1 195324443 195324741 107811 107811 D NO +NM_144875_Rab7l1 chr1 133763813 133782396 + chr1 133114860 133115015 648798 648798 D NO +NM_144877_Mettl13 chr1 164462268 164478659 - chr1 164215623 164215935 246333 262724 U NO +NM_144878_Fmo4 chr1 164675648 164744002 - chr1 164215623 164215935 459713 528067 U NO +NM_144879_Vash2 chr1 192771545 192803413 - chr1 194258648 194259032 1455235 1455235 D NO +NM_144880_Ppp2r5a chr1 193175865 193290728 - chr1 194258648 194259032 967920 967920 D NO +NM_144881_Hhat chr1 194320603 194649833 - chr1 194645118 194645475 0 4358 . YES +NM_144882_2810022L02Rik chr1 57831026 58005952 + chr1 55283572 55283675 2547351 2547351 D NO +NM_144953_1700019D03Rik chr1 52981207 53077002 - chr1 52625416 52625560 355647 451442 U NO +NM_144960_Fcamr chr1 132697479 132711317 + chr1 132950929 132951247 239612 253450 U NO +NM_145100_Lypd1 chr1 127768620 127809650 - chr1 132950929 132951247 5141279 5141279 D NO +NM_145128_Mgat5 chr1 129101583 129384133 + chr1 132950929 132951247 3566796 3849346 U NO +NM_145141_Fcrla chr1 172847725 172857714 - chr1 172620917 172621080 226645 236634 U NO +NM_145142_Chst10 chr1 38920721 38955057 - chr1 39492140 39492513 537083 537083 D NO +NM_145143_Mpp4 chr1 59177791 59218762 - chr1 55283572 55283675 3894116 3935087 U NO +NM_145222_B3gnt7 chr1 88199427 88203870 + chr1 88408969 88409267 205099 209542 U NO +NM_145381_Lactb2 chr1 13604244 13650616 - chr1 13829227 13829564 178611 178611 D NO +NM_145392_Bag2 chr1 33802345 33814648 - chr1 34206924 34207100 392276 392276 D NO +NM_145413_Fam20b chr1 158608676 158649180 - chr1 158580638 158580759 27917 68421 U NO +NM_145415_AA408296 chr1 194918802 194956446 - chr1 194957396 194957723 950 950 D NO +NM_145417_Rnpep chr1 137159304 137180985 - chr1 136956468 136956598 202706 224387 U NO +NM_145506_Epb4.1l5 chr1 121437741 121545557 - chr1 120760212 120760461 677280 785096 U NO +NM_145508_Dyrk3 chr1 133018921 133034897 - chr1 133114860 133115015 79963 79963 D NO +NM_145509_5430435G22Rik chr1 133585272 133610099 + chr1 133114860 133115015 470257 470257 D NO +NM_145510_Rabif chr1 136391105 136405512 + chr1 135851853 135852218 538887 538887 D NO +NM_145511_BC003331 chr1 152183263 152240229 - chr1 154971572 154971673 2731343 2731343 D NO +NM_145512_Sft2d2 chr1 167104119 167124549 - chr1 167222964 167223261 98415 98415 D NO +NM_145513_Tiprl chr1 167133855 167183116 - chr1 167222964 167223261 39848 39848 D NO +NM_145514_Wdr26 chr1 183100306 183150525 - chr1 182479646 182479905 620401 670620 U NO +NM_145515_Mark1 chr1 186720345 186823408 - chr1 185854947 185855105 865240 968303 U NO +NM_145516_Plekhb2 chr1 34906787 34936422 + chr1 34206924 34207100 699687 699687 D NO +NM_145517_Ormdl1 chr1 53353438 53367153 + chr1 52625416 52625560 727878 727878 D NO +NM_145518_Ndufs1 chr1 63190187 63223454 - chr1 63664888 63665018 441434 441434 D NO +NM_145519_Farp2 chr1 95408676 95518914 + chr1 95186508 95186637 222039 222039 D NO +NM_145624_Zfp709 chr1 87911157 87911749 - chr1 88408969 88409267 497220 497220 D NO +NM_145692_Lrrc67 chr1 9943781 9999420 - chr1 9619175 9619382 324399 380038 U NO +NM_145856_Il17f chr1 20767237 20776566 - chr1 17030405 17030545 3736692 3746021 U NO +NM_145977_Slc45a3 chr1 133859512 133879541 + chr1 133114860 133115015 744497 744497 D NO +NM_145991_Cdc73 chr1 145274292 145549936 - chr1 145591041 145591176 41105 41105 D NO +NM_145996_Arid5a chr1 36359349 36380874 + chr1 36106813 36107058 252291 252291 D NO +NM_146103_Tmem185b chr1 121396063 121425550 + chr1 120760212 120760461 635602 635602 D NO +NM_146106_Lyplal1 chr1 187911630 187941208 - chr1 185854947 185855105 2056525 2086103 U NO +NM_146107_Actr1b chr1 36754975 36766847 - chr1 36106813 36107058 647917 659789 U NO +NM_146108_Hibch chr1 52899113 52977830 + chr1 52625416 52625560 273553 273553 D NO +NM_146110_Aamp chr1 74326421 74331613 - chr1 75481920 75482054 1150307 1150307 D NO +NM_146112_Gigyf2 chr1 89223593 89347370 + chr1 89989553 89989714 642183 765960 U NO +NM_146250_Gpr1 chr1 63229165 63309823 - chr1 63664888 63665018 355065 355065 D NO +NM_146277_Olfr1412 chr1 94484843 94486082 + chr1 95186508 95186637 700426 701665 U NO +NM_146305_Olfr420 chr1 176088784 176089871 + chr1 174376470 174376659 1712125 1712125 D NO +NM_146490_Olfr1411 chr1 94493008 94494065 + chr1 95186508 95186637 692443 693500 U NO +NM_146491_Olfr1410 chr1 94504416 94505384 + chr1 95186508 95186637 681124 682092 U NO +NM_146715_Olfr419 chr1 176180115 176200418 - chr1 174376470 174376659 1803456 1823759 U NO +NM_146716_Olfr432 chr1 175977437 175981444 + chr1 174376470 174376659 1600778 1600778 D NO +NM_146717_Olfr433 chr1 175971174 175973629 + chr1 174376470 174376659 1594515 1594515 D NO +NM_146718_Olfr430 chr1 175999350 176000384 + chr1 174376470 174376659 1622691 1622691 D NO +NM_146720_Olfr421 chr1 176072364 176082596 + chr1 174376470 174376659 1695705 1695705 D NO +NM_146721_Olfr424 chr1 176057388 176067824 + chr1 174376470 174376659 1680729 1680729 D NO +NM_146722_Olfr429 chr1 176019173 176020111 + chr1 174376470 174376659 1642514 1642514 D NO +NM_146761_Olfr414 chr1 176360513 176361670 + chr1 174376470 174376659 1983854 1983854 D NO +NM_146764_Olfr1408 chr1 175060414 175083388 - chr1 174376470 174376659 683755 706729 U NO +NM_146881_Olfr1404 chr1 175145784 175146725 + chr1 174376470 174376659 769125 769125 D NO +NM_147037_Olfr1413 chr1 94469750 94470721 + chr1 95186508 95186637 715787 716758 U NO +NM_148937_Plcd4 chr1 74589462 74614368 + chr1 75481920 75482054 867552 892458 U NO +NM_152895_Kdm5b chr1 136455975 136529487 + chr1 136956468 136956598 426981 500493 U NO +NM_152915_Dner chr1 84366415 84706993 - chr1 88408969 88409267 3701976 3701976 D NO +NM_153064_Ndufs2 chr1 173164989 173180188 - chr1 172620917 172621080 543909 559108 U NO +NM_153088_Ctdsp1 chr1 74438065 74443852 + chr1 75481920 75482054 1038068 1043855 U NO +NM_153111_Fev chr1 74915158 74932371 - chr1 75481920 75482054 549549 549549 D NO +NM_153114_Otos chr1 94540797 94553072 - chr1 95186508 95186637 633436 633436 D NO +NM_153137_Traf3ip3 chr1 195001656 195027877 - chr1 194957396 194957723 43933 70154 U NO +NM_153154_Tcfap2d chr1 19027377 19157044 + chr1 17030405 17030545 1996832 1996832 D NO +NM_153171_Rgs13 chr1 145985803 146024550 - 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chr1 39492140 39492513 1438039 1438039 D NO +NM_172124_B3gat2 chr1 23755411 23855977 + chr1 24609562 24609623 753585 854151 U NO +NM_172294_Sulf1 chr1 12708560 12851249 + chr1 13829227 13829564 977978 1120667 U NO +NM_172406_Trak2 chr1 58955979 59031177 - chr1 55283572 55283675 3672304 3747502 U NO +NM_172422_Fastkd2 chr1 63777134 63803028 + chr1 63664888 63665018 112116 112116 D NO +NM_172430_Sphkap chr1 83207585 83404745 - chr1 78630893 78631160 4576425 4773585 U NO +NM_172463_Sned1 chr1 95132418 95197642 + chr1 95186508 95186637 0 54090 . 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chr1 120760212 120760461 1032558 1049248 U NO +NM_175118_Dusp28 chr1 94803563 94805012 + chr1 95186508 95186637 381496 382945 U NO +NM_175127_Fbxo28 chr1 184242976 184303818 - chr1 185854947 185855105 1551129 1551129 D NO +NM_175170_Pogk chr1 168314763 168391350 - chr1 167906284 167906554 408209 484796 U NO +NM_175200_Als2cr11 chr1 59053967 59151744 - chr1 55283572 55283675 3770292 3868069 U NO +NM_175210_Abca12 chr1 71207671 71501632 - chr1 72769824 72770056 1268192 1268192 D NO +NM_175236_Adhfe1 chr1 9538049 9570746 + chr1 9619046 9619167 48300 80997 U NO +NM_175259_Shisa4 chr1 137267654 137274885 - chr1 136956468 136956598 311056 318287 U NO +NM_175293_D630023F18Rik chr1 65151863 65176420 - chr1 63664888 63665018 1486845 1511402 U NO +NM_175294_Nucks1 chr1 133807079 133832888 + chr1 133114860 133115015 692064 692064 D NO +NM_175296_Mael chr1 168115771 168178081 - chr1 167906284 167906554 209217 271527 U NO +NM_175370_Als2cr12 chr1 58714975 58752801 - chr1 55283572 55283675 3431300 3469126 U NO +NM_175382_2700049P18Rik chr1 133344141 133436449 + chr1 133114860 133115015 229126 229126 D NO +NM_175439_Mars2 chr1 55294084 55297625 + chr1 55283572 55283675 10409 10409 D NO +NM_175443_Etnk2 chr1 135260167 135276893 + chr1 135582677 135582828 305784 322510 U NO +NM_175460_Nmnat2 chr1 154802128 154966391 + chr1 154971572 154971673 5181 169444 U NO +NM_175461_Fam78b chr1 168898096 169021408 + chr1 167906284 167906554 991542 991542 D NO +NM_175564_Tmem169 chr1 72330953 72349677 + chr1 72769824 72770056 420147 438871 U NO +NM_175642_Bai3 chr1 25084207 25887514 - chr1 26734195 26734485 846681 846681 D NO +NM_175686_Prrx1 chr1 165175252 165245859 - chr1 164215623 164215935 959317 1029924 U NO +NM_176916_Pld5 chr1 177892457 178205403 - chr1 181061299 181061446 2855896 2855896 D NO +NM_176972_Usp37 chr1 74482084 74590860 - chr1 75481920 75482054 891060 891060 D NO +NM_176980_Ankar chr1 72689581 72747143 - chr1 72769824 72770056 22681 22681 D NO +NM_177068_Olfml2b chr1 172569075 172612915 + chr1 172620779 172620912 7864 51704 U NO +NM_177084_Slc9a4 chr1 40636956 40687551 + chr1 40325917 40326123 310833 310833 D NO +NM_177129_Cntn2 chr1 134406005 134442705 - chr1 135582677 135582828 1139972 1139972 D NO +NM_177164_A830006F12Rik chr1 70772309 70929065 + chr1 72769824 72770056 1840759 1997515 U NO +NM_177173_A830018L16Rik chr1 11404178 11994163 + chr1 10617233 10617437 786741 786741 D NO +NM_177235_Bend6 chr1 33903283 33964764 - chr1 34206924 34207100 242160 242160 D NO +NM_177243_Slc26a9 chr1 133640599 133668075 + chr1 133114860 133115015 525584 525584 D NO +NM_177305_Arl4c chr1 90569702 90617572 - chr1 90592499 90592629 0 24943 . YES +NM_177397_Atp6v1g3 chr1 140120875 140186039 + chr1 140381656 140381785 195617 260781 U NO +NM_177445_Dars chr1 130260284 130314013 - chr1 132950929 132951247 2636916 2636916 D NO +NM_177587_Aqp12 chr1 94886487 94908846 + chr1 95186508 95186637 277662 300021 U NO +NM_177604_AA986860 chr1 132628563 132644539 + chr1 132950929 132951247 306390 322366 U NO +NM_177643_Zfp281 chr1 138487073 138526617 + chr1 138437726 138437860 49213 49213 D NO +NM_177646_Dgkd chr1 89749836 89841946 + chr1 89989553 89989714 147607 239717 U NO +NM_177722_6030422M02Rik chr1 9898713 9932156 + chr1 9619175 9619382 279331 279331 D NO +NM_177723_Vsig8 chr1 174486069 174513273 + chr1 174376470 174376659 109410 109410 D NO +NM_177724_D230039L06Rik chr1 180426979 180686112 + chr1 181061299 181061446 375187 634320 U NO +NM_177756_Glt25d2 chr1 154223175 154357825 + chr1 154971572 154971673 613747 748397 U NO +NM_177757_Kif26b chr1 180720593 180862983 + chr1 181061299 181061446 198316 340706 U NO +NM_177781_Trpa1 chr1 14861962 14909072 - chr1 13829227 13829564 1032398 1079508 U NO +NM_177834_Cpa6 chr1 10314801 10710026 - chr1 10617233 10617437 0 92589 . YES +NM_177838_Fam163a chr1 157923096 158135544 - chr1 158510523 158510813 374979 374979 D NO +NM_177839_Tnn chr1 161966935 162084477 - chr1 163827897 163828062 1743420 1743420 D NO +NM_178051_Mterfd2 chr1 95195779 95202630 - chr1 95186508 95186637 9142 15993 U NO +NM_178055_Dnajb2 chr1 75233016 75242264 + chr1 75481920 75482054 239656 248904 U NO +NM_178119_Agap1 chr1 91351421 91791845 + chr1 91496003 91496145 0 144582 . YES +NM_178241_Il8ra chr1 74238380 74241205 - chr1 75481920 75482054 1240715 1240715 D NO +NM_178243_5830403L16Rik chr1 155697272 155747352 - chr1 155123313 155123435 573837 623917 U NO +NM_178244_Teddm1 chr1 155724147 155740188 + chr1 155123313 155123435 600712 600712 D NO +NM_178399_3110035E14Rik chr1 9591248 9617222 + chr1 9619046 9619167 1824 27798 U NO +NM_178405_Atp1a2 chr1 174201852 174233438 - chr1 174376470 174376659 143032 143032 D NO +NM_178593_Rcsd1 chr1 167572007 167639868 - chr1 167906284 167906554 266416 266416 D NO +NM_178598_Tagln2 chr1 174430123 174475991 + chr1 174376470 174376659 53464 53464 D NO +NM_178601_Imp4 chr1 34496377 34511555 + chr1 34206924 34207100 289277 289277 D NO +NM_178632_Ints7 chr1 193399085 193447550 + chr1 194258648 194259032 811098 859563 U NO +NM_178653_Sccpdh chr1 181598088 181617593 + chr1 181061299 181061446 536642 536642 D NO +NM_178690_Rab3gap1 chr1 129765355 129840723 + chr1 132950929 132951247 3110206 3185574 U NO +NM_178691_Yod1 chr1 132612680 132618643 + chr1 132950929 132951247 332286 338249 U NO +NM_178692_C130074G19Rik chr1 186695805 186707077 - chr1 185854947 185855105 840700 851972 U NO +NM_178775_Rps6kc1 chr1 192524091 192736016 - chr1 194258648 194259032 1522632 1522632 D NO +NM_178779_Rnf152 chr1 107176426 107253513 - chr1 108747519 108747791 1494006 1494006 D NO +NM_178874_Tmcc2 chr1 134252895 134288369 - chr1 133114860 133115015 1137880 1173354 U NO +NM_178883_Gorab chr1 165315039 165340946 - chr1 164215623 164215935 1099104 1125011 U NO +NM_178884_Obsl1 chr1 75482401 75503218 - chr1 75481920 75482054 347 21164 U NO +NM_181405_Rnpepl1 chr1 94807467 94817954 + chr1 95186508 95186637 368554 379041 U NO +NM_181546_Syt14 chr1 194713536 194861959 - chr1 194957396 194957723 95437 95437 D NO +NM_181750_R3hdm1 chr1 129999892 130134312 + chr1 132950929 132951247 2816617 2951037 U NO +NM_181796_Gstp2 chr1 193897651 193905509 - chr1 194258648 194259032 353139 353139 D NO +NM_182716_Nfasc chr1 134445291 134638354 - chr1 135582677 135582828 944323 944323 D NO +NM_182930_Plekha6 chr1 135077806 135200008 + chr1 135582677 135582828 382669 504871 U NO +NM_183019_Arhgef4 chr1 34788954 34873560 + chr1 34206924 34207100 581854 581854 D NO +NM_183022_Accn4 chr1 75447063 75470207 + chr1 75481920 75482054 11713 34857 U NO +NM_183027_Ap1s3 chr1 79591820 79668545 - chr1 78630893 78631160 960660 1037385 U NO +NM_183028_Pcmtd1 chr1 7079053 7163709 + chr1 9619046 9619167 2455337 2539993 U NO +NM_183124_Defb41 chr1 18241071 18350659 - chr1 17030405 17030545 1210526 1320114 U NO +NM_183355_Pbx1 chr1 170049495 170512777 - chr1 170255081 170255260 0 257517 . YES +NM_183391_Tnfsf18 chr1 163373523 163524094 + chr1 163827897 163828062 303803 454374 U NO +NM_194333_Slc23a3 chr1 75120731 75130464 - chr1 75481920 75482054 351456 351456 D NO +NM_198006_6330578E17Rik chr1 37473934 37474944 - chr1 36106813 36107058 1366876 1367886 U NO +NM_198006_6330578E17Rik chr1 37477057 37486928 - chr1 36106813 36107058 1369999 1379870 U NO +NM_198028_Serpinb10 chr1 109425580 109445838 + chr1 108747519 108747791 677789 677789 D NO +NM_198127_Abi2 chr1 60466022 60537998 + chr1 63664888 63665018 3126890 3198866 U NO +NM_198247_Sertad4 chr1 194670313 194693726 - chr1 194645118 194645475 24838 48251 U NO +NM_198303_Eif5b chr1 38054627 38112414 + chr1 39492140 39492513 1379726 1437513 U NO +NM_198652_6430706D22Rik chr1 90158880 90174174 - chr1 89989553 89989714 169166 184460 U NO +NM_198653_Iars2 chr1 187109458 187153280 - chr1 185854947 185855105 1254353 1298175 U NO +NM_198654_Nsl1 chr1 192886918 192919389 + chr1 194258648 194259032 1339259 1371730 U NO +NM_198680_Serpinb3b chr1 109033488 109059720 - chr1 108747519 108747791 285697 311929 U NO +NM_198899_Ugcgl1 chr1 36196873 36301555 - chr1 36106813 36107058 89815 194497 U NO +NM_198934_Pou2f1 chr1 167804181 167932753 - chr1 167906284 167906554 0 26199 . YES +NM_199007_Sgol2 chr1 58026657 58085164 + chr1 55283572 55283675 2742982 2742982 D NO +NM_199021_Dpp10 chr1 125044486 126749525 - chr1 120760212 120760461 4284025 5989064 U NO +NM_201363_Serpinb3c chr1 109088051 109198931 - chr1 108747519 108747791 340260 451140 U NO +NM_201376_Serpinb3d chr1 108974770 108980057 - chr1 108747519 108747791 226979 232266 U NO +NM_201641_Ugt1a10 chr1 89922380 90115570 + chr1 89989553 89989714 0 67173 . YES +NM_206896_Olfr12 chr1 94516341 94538591 + chr1 95186508 95186637 647917 670167 U NO +NM_207031_Ano7 chr1 95270385 95302271 + chr1 95186508 95186637 83748 83748 D NO +NM_207137_Olfr417 chr1 176299050 176299979 + chr1 174376470 174376659 1922391 1922391 D NO +NM_207137_Olfr417 chr1 176321202 176322113 + chr1 174376470 174376659 1944543 1944543 D NO +NM_207158_Olfr427 chr1 176028781 176030538 + chr1 174376470 174376659 1652122 1652122 D NO +NM_207225_Hdac4 chr1 93755950 94103099 - chr1 95186508 95186637 1083409 1083409 D NO +NM_207228_Tsga10 chr1 37783457 37922148 - chr1 39492140 39492513 1569992 1569992 D NO +NM_207233_C1ql2 chr1 122196386 122239751 + chr1 120760212 120760461 1435925 1435925 D NO +NM_207281_4832428D23Rik chr1 44260915 44515719 - chr1 44195449 44195639 65276 320080 U NO +NM_207583_Fam5b chr1 160175402 160286644 - chr1 159240736 159240866 934536 1045778 U NO +NM_207653_Cflar chr1 58768296 58813658 + chr1 55283572 55283675 3484621 3484621 D NO +NM_207653_Cflar chr1 58813703 58815725 + chr1 55283572 55283675 3530028 3530028 D NO +NM_213616_Atp2b4 chr1 135602265 135697538 - chr1 135582677 135582828 19437 114710 U NO +NR_002840_Gas5 chr1 162964758 162968663 + chr1 163827897 163828062 859234 863139 U NO +NR_002858_EG241041 chr1 21268965 21306401 - chr1 24609562 24609623 3303161 3303161 D NO +NR_002870_Dnm3os chr1 164119785 164155671 + chr1 164215623 164215935 59952 95838 U NO +NR_003623_EG277333 chr1 182251970 182262902 - chr1 182479646 182479905 216744 216744 D NO +NR_026896_4931440L10Rik chr1 136437533 136449760 - chr1 136956468 136956598 506708 506708 D NO
--- a/tool_dependencies.xml Wed Feb 24 09:39:14 2016 -0500 +++ b/tool_dependencies.xml Thu Sep 01 04:47:28 2016 -0400 @@ -17,10 +17,10 @@ </install> <readme>Installs Python module XlsxWriter 0.8.4</readme> </package> - <package name="rnachipintegrator" version="1.0.0"> + <package name="rnachipintegrator" version="1.0.2"> <install version="1.0"> <actions> - <action type="download_by_url">https://pypi.python.org/packages/source/R/RnaChipIntegrator/RnaChipIntegrator-1.0.0.tar.gz</action> + <action type="download_by_url">https://pypi.python.org/packages/3b/28/a83c8d0503e5af1318c1b0d7cdbdca933a9647220e461d1a8f5800a58de2/RnaChipIntegrator-1.0.2.tar.gz</action> <action type="shell_command"> pip install --no-use-wheel --install-option "--prefix=$INSTALL_DIR" . </action> @@ -30,6 +30,6 @@ </action> </actions> </install> - <readme>Installs RnaChipIntegrator 1.0.0 from PyPI</readme> + <readme>Installs RnaChipIntegrator 1.0.2 from PyPI</readme> </package> </tool_dependency>