Mercurial > repos > pjbriggs > trimmomatic

annotate test-data/trimmomatic_se_out1.err @ 16:9a38087e3bfd draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/packages/trimmomatic commit ab36e4731731f12cce0e7d7cc3b50ba6a0bab1ef
author iuc
date Sun, 14 Jan 2024 11:00:33 +0000
parents 59054f086eca
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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11
59054f086eca Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
pjbriggs
parents:
diff changeset
1 TrimmomaticSE: Started with arguments:
59054f086eca Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
pjbriggs
parents:
diff changeset
2 -threads 1 fastq_in.fastqsanger fastq_out.fastqsanger SLIDINGWINDOW:4:20 -trimlog trimlog
59054f086eca Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
pjbriggs
parents:
diff changeset
3 Quality encoding detected as phred33
59054f086eca Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
pjbriggs
parents:
diff changeset
4 Input Reads: 10 Surviving: 8 (80.00%) Dropped: 2 (20.00%)
59054f086eca Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
pjbriggs
parents:
diff changeset
5 TrimmomaticSE: Completed successfully