Mercurial > repos > portiahollyoak > breakdancer

annotate test-data/README @ 1:8c1e654262b1 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
author portiahollyoak
date Fri, 13 May 2016 12:16:39 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
1 This is a collection of test data to be used with breakdancer. It consists of:
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
2
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
3 an alignment file
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
4 a output bed file
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
5
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
6 The details for the alignment file to be put into breakdancer are:
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
7 mean:227
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
8 standard deviation:98
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
9 read length:125
8c1e654262b1 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
parents:
diff changeset
10 sample:X_10000000_Hum1