Mercurial > repos > portiahollyoak > breakdancer_max

annotate test-data/README @ 0:f65530d07350 draft

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planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
author portiahollyoak
date Tue, 17 May 2016 04:35:44 -0400
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children 021a0f7ab3f6
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f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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1 This is a collection of test data to be used with breakdancer. It consists of:
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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3 an alignment file
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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4 a output bed file
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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5
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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6 The details for the alignment file to be put into breakdancer are:
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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7 mean:227
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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8 standard deviation:98
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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9 read length:125
f65530d07350 planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
portiahollyoak
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10 sample:X_10000000_Hum1