Mercurial > repos > proteore > proteore_data_manager

diff data_manager/resource_building.py @ 5:b05fa99ddda2 draft

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"planemo upload commit a23ff40d482d58e0425108bf60372e5fcafb847e"
author proteore
date Thu, 06 Feb 2020 04:02:50 -0500
parents e967a99d66b3
children 8f33a6e6e36c
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line diff
--- a/data_manager/resource_building.py	Thu Jan 23 08:38:02 2020 -0500
+++ b/data_manager/resource_building.py	Thu Feb 06 04:02:50 2020 -0500
@@ -48,6 +48,10 @@
         tissue_name = "HPA full atlas"
         url = "https://www.proteinatlas.org/download/proteinatlas.tsv.zip"
         table = "proteore_protein_full_atlas"
+    elif tissue == "HPA_RNA_tissue":
+        tissue_name = "HPA RNA tissue"
+        url = "https://www.proteinatlas.org/download/rna_tissue_consensus.tsv.zip"
+        table = "proteore_protein_atlas_rna_tissue"
     
     output_file = tissue +"_"+ time.strftime("%d-%m-%Y") + ".tsv"
     path = os.path.join(target_directory, output_file)