Mercurial > repos > proteore > proteore_data_manager

diff data_manager_conf.xml @ 5:b05fa99ddda2 draft

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"planemo upload commit a23ff40d482d58e0425108bf60372e5fcafb847e"
author proteore
date Thu, 06 Feb 2020 04:02:50 -0500
parents e967a99d66b3
children
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line diff
--- a/data_manager_conf.xml	Thu Jan 23 08:38:02 2020 -0500
+++ b/data_manager_conf.xml	Thu Feb 06 04:02:50 2020 -0500
@@ -31,6 +31,21 @@
                 </column>
             </output>
         </data_table>
+        <data_table name="proteore_protein_atlas_rna_tissue">
+            <output>
+                <column name="id"/>
+                <column name="release"/>
+                <column name="name" />
+                <column name="tissue" />
+                <column name="value" output_ref="output" >
+                    <move type="file">
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">protein_atlas/</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/protein_atlas/${release}.tsv</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
         <data_table name="proteore_protein_atlas_tumor_tissue">
             <output>
                 <column name="id"/>