Mercurial > repos > proteore > proteore_prot_features
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| author | proteore |
|---|---|
| date | Thu, 20 Aug 2020 03:09:52 -0400 |
| parents | 0b46a7aead62 |
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Wrapper for Protein Features tool ================================= **Authors** Lisa Peru, T.P. Lien Nguyen, Florence Combes, Yves Vandenbrouck CEA, INSERM, CNRS, Grenoble-Alpes University, BIG Institute, FR Sandra Dérozier, Olivier Rué, Christophe Caron, Valentin Loux INRA, Paris-Saclay University, MAIAGE Unit, Migale Bioinformatics platform This work has been partially funded through the French National Agency for Research (ANR) IFB project. Contact support@proteore.org for any questions or concerns about the Galaxy implementation of this tool. --------------------------------- This tool add annotation (protein features) from neXtProt database (knowledge base on human proteins) to your protein IDs list. **Input** Input can be a file containing multiple fields but with **at least one column of Uniprot accession number or neXtProt IDs**. If your input file contains other type of IDs, please use the ID_Converter tool. **Databases** Annotations have been retrieved from the neXtProt released on 21/02/2018 using the latest data from peptideAtlas (release Human 2018-1) using a REST API (https://academic.oup.com/nar/article/43/D1/D764/2439066#40348985) (Gaudet et al., 2017) **Outputs** The output is a tabular file. The initial columns are kept and columns are be added according to which annotation you have selected.