diff topGO.xml @ 1:6788a57c5cb5 draft

planemo upload commit 5774fd6a5a746f36f6bf4671a51a39ea2b978300-dirty

--- a/topGO.xml	Mon Dec 04 09:39:21 2017 -0500
+++ b/topGO.xml	Fri Feb 16 04:15:08 2018 -0500
@@ -120,9 +120,9 @@
      <test>
        <conditional name="inputtype">
          <param name="filetype " value="tabfile"/>
-         <param name="genelist" value="prot_reactome_EGFR_mapped_ensg.txt"/>
-         <param name="column" value="c1"/>
-         <param name="header" value="FALSE"/>
+         <param name="genelist" value="ID_Converter_FKW_Lacombe_et_al_2017_OK.txt"/>
+         <param name="column" value="c8"/>
+         <param name="header" value="TRUE"/>
        </conditional>
        <param name="ontocat" value="BP"/>
        <param name="option" value="elim"/>
@@ -138,9 +138,9 @@
          <param name="dotoutput" value="TRUE"/>
        </conditional>
        <param name="geneuniverse" value="org.Hs.eg.db"/>
-       <output name="outputtext" file="Text_output_for_topGO_analysis.txt"/>
-       <output name="outputbarplot" file="Barplot_output_for_topGO_analysis.png"/>
-       <output name="outputdotplot" file="Dotplot_output_for_topGO_analysis.png"/>
+       <output name="outputtext" file="Text_output_for_topGO_analysis_BP_category.tabular"/>
+       <output name="outputbarplot" file="Barplot_output_for_topGO_analysis_BP_category.png"/>
+       <output name="outputdotplot" file="Dotplot_output_for_topGO_analysis_BP_category.png"/>
      </test>
    </tests>
    <help><![CDATA[