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diff test-data/fluA_H3_clade_assigned_antigenic_sites_extracted.fasta @ 0:be856549e863 draft default tip

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planemo upload for repository https://github.com/Public-Health-Bioinformatics/flu_classification_suite commit b96b6e06f6eaa6ae8ef4c24630dbb72a4aed7dbe
author public-health-bioinformatics
date Thu, 04 Jul 2019 19:37:41 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/fluA_H3_clade_assigned_antigenic_sites_extracted.fasta	Thu Jul 04 19:37:41 2019 -0400
@@ -0,0 +1,94 @@
+>A-ON-314-2017_3C.3a
+QNSSIEIDSQLENIQGQNKKLFVNKYNVPRTNNSNAGVTQNTSSIGSKSSRNTHLNSKAL
+NTMNNEQFDKLIVGTDKDISLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKQS
+
+>A-AB-399-2017_3C.2a_+_N31S_+_D53N_+_R142G_+_S144R_+_N171K_+_I192T_+_Q197H
+QNSSIEINSQLENIQGQNKKLFVSKYNVPRTNNSNTGVTQNTSAIGSRSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDTFLAHSRTKRSAVIPNIGSIPSRIKGLLNSTIRSSPGKKSEF
+VRIACRYVKHS
+
+>A-QC-303-2017_3C.2a_+_N31S_+_D53N_+_R142G_+_S144R_+_N171K_+_I192T_+_Q197H
+QNSSIEINSQLENIQGQNKKLFVSKYNVPRTNNSNTGVTQNTSAIGSRSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDTFLAHSRTKRSAVIPNIGSIPSRIKGLLNSTIRSSPGKKSEF
+VRIACRYVKHS
+
+>A-AB-319-2017_3C.2a_+_N31S_+_D53N_+_R142G_+_S144R_+_N171K_+_I192T_+_Q197H
+QNSSIEINSQLENIQGQNKKLFVSKYNVPRTNNSNTGVTQNTSAIGSRSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDTFLAHSRTKRSAVIPNIGSIPSRIKGLLNSTIRSSPGKKSEF
+VRIACRYVKHS
+
+>A-AB-308-2017_3C.2a1_+_N121K_+_T135K
+QNSSIEIDSQLENIQDQNKKLFVSKHNVPRTKDSNTGVTQNKSAIRSSSSRNTHLNYTAL
+NTMNKEQFDKLIIGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS
+
+>A-AB-341-2017_3C.2a1_+_N121K_+_T135K
+QNSSIEIDSQLENIQDQNKKLFVSKHNVPRTKDSNTGVTQNKSAIRSSSSRNTHLNYTAL
+NTMNKEQFDKLIIGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS
+
+>A-BC-024-2018_3C.2a1_+_N121K_+_T135K
+QNSSIEIDSQLENIQDQNKKLFVSKHNVPRTKNSNTGVTQNKSAIRSSSSRNTHLNYTAL
+NTMNKEQFDKLIIGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS
+
+>A-QC-309-2017_3C.2a1_+_N121K_+_K92R_+_H311Q
+QNSSIEIDSQLGNIQDQNKKLFVSRYNVPRTKDSNTGVTQNKSAIGSSSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKQS
+
+>A-BC-324-2017_3C.2a1_+_N121K_+_K92R_+_H311Q
+QNSSMEIDSQLGNIQGQNKKLFVSRYNVPRTKNSNTGVTQNKSAIGSSSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKQS
+
+>A-QC-315-2017_3C.2a1_+_N121K_+_K92R_+_H311Q
+QNSSIEIDSQLGNIQGQNKKLFVSRYNVPRTKNSNAGVTQNKSAIGSSSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKQS
+
+>A-ON-016-2018_3C.2a_+_N121K_+_S144K
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTKNSNTGVTQNKSAIRSKSSKNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+
+>A-BC-325-2017_3C.2a_+_N121K_+_S144K
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTKNSNTGVTQNKSAIRSKSSKNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+
+>A-ON-003-2018_3C.2a_+_N121K_+_S144K
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTKNSNTGVTQNKSAIRSKSSKNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+
+>A-ON-309-2017_No_Match
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVKQNTSAIKSSSSRNTHLNYKAL
+NTMNNEQFDKLIVGTDKDIFLAQSKTKISAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+
+>A-BC-330-2017_No_Match
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVKQNTSAIKSRSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+
+>A-AB-415-2017_3C.2a_+_T131K_+_R142K_+_R261Q
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+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGFIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+
+>A-AB-400-2017_3C.2a_+_T131K_+_R142K_+_R261Q
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+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+
+>A-AB-416-2017_3C.2a_+_T131K_+_R142K_+_R261Q
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+VRIACRYVKHS
+
+>A-QC-316-2017_3C.2a_+_T131K_+_R142K_+_R261Q
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+VRIACRYVKHS