Mercurial > repos > q2d2 > qiime2__deblur__denoise_other
changeset 1:86e36a2b44b0 draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__deblur commit 69da7976573cc07a363ac66bdacc9269d7cd3732
| author | q2d2 |
|---|---|
| date | Fri, 13 Jan 2023 22:42:39 +0000 |
| parents | 574ab3a299a9 |
| children | 61ee71aacf1c |
| files | qiime2__deblur__denoise_other.xml test-data/.gitkeep test-data/denoise_16S.test0.demux-filtered.qza test-data/visualize_stats.test0.deblur-stats.qza |
| diffstat | 3 files changed, 7 insertions(+), 7 deletions(-) [+] |
line wrap: on
line diff
--- a/qiime2__deblur__denoise_other.xml Mon Aug 29 19:25:44 2022 +0000 +++ b/qiime2__deblur__denoise_other.xml Fri Jan 13 22:42:39 2023 +0000 @@ -1,31 +1,31 @@ <?xml version='1.0' encoding='utf-8'?> <!-- -Copyright (c) 2022, QIIME 2 development team. +Copyright (c) 2023, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: - q2galaxy (version: 2022.8.1) + q2galaxy (version: 2022.11.1) for: - qiime2 (version: 2022.8.1) + qiime2 (version: 2022.11.1) --> -<tool name="qiime2 deblur denoise-other" id="qiime2__deblur__denoise_other" version="2022.8.0+q2galaxy.2022.8.1.2" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 deblur denoise-other" id="qiime2__deblur__denoise_other" version="2022.11.1+q2galaxy.2022.11.1.2" profile="22.05" license="BSD-3-Clause"> <description>Deblur sequences using a user-specified positive filter.</description> <requirements> - <container type="docker">quay.io/qiime2/core:2022.8</container> + <container type="docker">quay.io/qiime2/core:2022.11</container> </requirements> <version_command>q2galaxy version deblur</version_command> - <command detect_errors="aggressive">q2galaxy run deblur denoise_other '$inputs'</command> + <command detect_errors="exit_code">q2galaxy run deblur denoise_other '$inputs'</command> <configfiles> <inputs name="inputs" data_style="paths"/> </configfiles> <inputs> <param name="demultiplexed_seqs" type="data" format="qza" label="demultiplexed_seqs: SampleData[SequencesWithQuality | PairedEndSequencesWithQuality | JoinedSequencesWithQuality]" help="[required] The demultiplexed sequences to be denoised."> <options options_filter_attribute="metadata.semantic_type"> + <filter type="add_value" value="SampleData[SequencesWithQuality]"/> <filter type="add_value" value="SampleData[PairedEndSequencesWithQuality]"/> <filter type="add_value" value="SampleData[JoinedSequencesWithQuality]"/> - <filter type="add_value" value="SampleData[SequencesWithQuality]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['SampleData[JoinedSequencesWithQuality]', 'SampleData[PairedEndSequencesWithQuality]', 'SampleData[SequencesWithQuality]']</validator> </param>