Mercurial > repos > q2d2 > qiime2__demux__filter_samples
changeset 4:b507d1f2196c draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__demux commit c7e80dcda727ce63b42aa8a946e9330310929797
| author | q2d2 |
|---|---|
| date | Mon, 03 Jun 2024 23:18:11 +0000 |
| parents | a23769ef6bd8 |
| children | 7595f1cbe5b7 |
| files | qiime2__demux__filter_samples.xml test-data/emp_single.test0.sequences.qza test-data/summarize.test0.demux.qza |
| diffstat | 3 files changed, 5 insertions(+), 5 deletions(-) [+] |
line wrap: on
line diff
--- a/qiime2__demux__filter_samples.xml Thu Apr 25 20:55:59 2024 +0000 +++ b/qiime2__demux__filter_samples.xml Mon Jun 03 23:18:11 2024 +0000 @@ -6,14 +6,14 @@ --> <!-- This tool was automatically generated by: - q2galaxy (version: 2024.2.1) + q2galaxy (version: 2024.5.0) for: - qiime2 (version: 2024.2.0) + qiime2 (version: 2024.5.0) --> -<tool name="qiime2 demux filter-samples" id="qiime2__demux__filter_samples" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 demux filter-samples" id="qiime2__demux__filter_samples" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause"> <description>Filter samples out of demultiplexed data.</description> <requirements> - <container type="docker">quay.io/qiime2/amplicon:2024.2</container> + <container type="docker">quay.io/qiime2/amplicon:2024.5</container> </requirements> <version_command>q2galaxy version demux</version_command> <command detect_errors="exit_code">q2galaxy run demux filter_samples '$inputs'</command> @@ -23,8 +23,8 @@ <inputs> <param name="demux" type="data" format="qza" label="demux: SampleData[SequencesWithQuality¹ | PairedEndSequencesWithQuality² | JoinedSequencesWithQuality³]" help="[required] The demultiplexed data from which samples should be filtered."> <options options_filter_attribute="metadata.semantic_type"> + <filter type="add_value" value="SampleData[PairedEndSequencesWithQuality]"/> <filter type="add_value" value="SampleData[SequencesWithQuality]"/> - <filter type="add_value" value="SampleData[PairedEndSequencesWithQuality]"/> <filter type="add_value" value="SampleData[JoinedSequencesWithQuality]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['SampleData[JoinedSequencesWithQuality]', 'SampleData[PairedEndSequencesWithQuality]', 'SampleData[SequencesWithQuality]']</validator>