Mercurial > repos > q2d2 > qiime2__diversity__alpha
changeset 5:324ab5e710fa draft default tip
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__diversity commit 5f71b597c9495eae67a447744fded834f56ca1f7
| author | q2d2 |
|---|---|
| date | Wed, 30 Oct 2024 19:38:32 +0000 |
| parents | 5c2c4ceabe7e |
| children | |
| files | qiime2__diversity__alpha.xml test-data/alpha_correlation.test0.alpha-div-faith-pd.qza test-data/alpha_group_significance.test0.alpha-div-faith-pd.qza |
| diffstat | 3 files changed, 8 insertions(+), 5 deletions(-) [+] |
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--- a/qiime2__diversity__alpha.xml Mon Jun 03 23:19:13 2024 +0000 +++ b/qiime2__diversity__alpha.xml Wed Oct 30 19:38:32 2024 +0000 @@ -6,14 +6,17 @@ --> <!-- This tool was automatically generated by: - q2galaxy (version: 2024.5.0) + q2galaxy (version: 2024.10.0) for: - qiime2 (version: 2024.5.0) + qiime2 (version: 2024.10.1) --> -<tool name="qiime2 diversity alpha" id="qiime2__diversity__alpha" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 diversity alpha" id="qiime2__diversity__alpha" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause"> <description>Alpha diversity</description> + <xrefs> + <xref type="bio.tools">qiime2</xref> + </xrefs> <requirements> - <container type="docker">quay.io/qiime2/amplicon:2024.5</container> + <container type="docker">quay.io/qiime2/amplicon:2024.10</container> </requirements> <version_command>q2galaxy version diversity</version_command> <command detect_errors="exit_code">q2galaxy run diversity alpha '$inputs'</command> @@ -24,8 +27,8 @@ <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency | RelativeFrequency | PresenceAbsence]" help="[required] The feature table containing the samples for which alpha diversity should be computed."> <options options_filter_attribute="metadata.semantic_type"> <filter type="add_value" value="FeatureTable[Frequency]"/> + <filter type="add_value" value="FeatureTable[PresenceAbsence]"/> <filter type="add_value" value="FeatureTable[RelativeFrequency]"/> - <filter type="add_value" value="FeatureTable[PresenceAbsence]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Frequency]', 'FeatureTable[PresenceAbsence]', 'FeatureTable[RelativeFrequency]']</validator> </param>