Mercurial > repos > q2d2 > qiime2__feature_classifier__classify_sklearn

changeset 7:9cac0601eb35 draft default tip

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planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__feature_classifier commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0
author q2d2
date Tue, 15 Jul 2025 21:56:02 +0000
parents 83b0feec07cf
children
files qiime2__feature_classifier__classify_sklearn.xml
diffstat 1 files changed, 6 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/qiime2__feature_classifier__classify_sklearn.xml	Mon May 05 18:49:38 2025 +0000
+++ b/qiime2__feature_classifier__classify_sklearn.xml	Tue Jul 15 21:56:02 2025 +0000
@@ -6,17 +6,17 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2025.4.0)
+    q2galaxy (version: 2025.7.0)
 for:
-    qiime2 (version: 2025.4.0)
+    qiime2 (version: 2025.7.0)
 -->
-<tool name="qiime2 feature-classifier classify-sklearn" id="qiime2__feature_classifier__classify_sklearn" version="2025.4.0+q2galaxy.2025.4.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 feature-classifier classify-sklearn" id="qiime2__feature_classifier__classify_sklearn" version="2025.7.0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause">
     <description>Pre-fitted sklearn-based taxonomy classifier</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2025.4</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.7</container>
     </requirements>
     <version_command>q2galaxy version feature_classifier</version_command>
     <command detect_errors="exit_code">q2galaxy run feature_classifier classify_sklearn '$inputs'</command>
@@ -66,10 +66,11 @@
                     <param name="confidence" type="float" min="0" max="1" value="0.7" label="confidence: Float % Range(0, 1, inclusive_end=True)" help="[default: 0.7]  Confidence threshold for limiting taxonomic depth. Set to &quot;disable&quot; to disable confidence calculation, or 0 to calculate confidence but not apply it to limit the taxonomic depth of the assignments."/>
                 </when>
             </conditional>
-            <param name="read_orientation" type="select" label="read_orientation: Str % Choices('same', 'reverse-complement', 'auto')" display="radio">
+            <param name="read_orientation" type="select" label="read_orientation: Str % Choices('same', 'reverse-complement', 'auto', 'both')" display="radio">
                 <option value="same">same</option>
                 <option value="reverse-complement">reverse-complement</option>
                 <option value="auto" selected="true">auto</option>
+                <option value="both">both</option>
             </param>
         </section>
     </inputs>