changeset 0:c6f80266af38 draft

planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__metadata commit 9023cfd83495a517fbcbb6f91d5b01a6f1afcda1

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/qiime2__metadata__distance_matrix.xml	Mon Aug 29 20:13:56 2022 +0000
@@ -0,0 +1,72 @@
+<?xml version='1.0' encoding='utf-8'?>
+<!--
+Copyright (c) 2022, QIIME 2 development team.
+
+Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
+-->
+<!--
+This tool was automatically generated by:
+    q2galaxy (version: 2022.8.1)
+for:
+    qiime2 (version: 2022.8.1)
+-->
+<tool name="qiime2 metadata distance-matrix" id="qiime2__metadata__distance_matrix" version="2022.8.0+q2galaxy.2022.8.1.2" profile="22.05" license="BSD-3-Clause">
+    <description>Create a distance matrix from a numeric Metadata column</description>
+    <requirements>
+        <container type="docker">quay.io/qiime2/core:2022.8</container>
+    </requirements>
+    <version_command>q2galaxy version metadata</version_command>
+    <command detect_errors="aggressive">q2galaxy run metadata distance_matrix '$inputs'</command>
+    <configfiles>
+        <inputs name="inputs" data_style="paths"/>
+    </configfiles>
+    <inputs>
+        <conditional name="metadata">
+            <param name="type" type="select" label="metadata: MetadataColumn[Numeric]" help="[required]  Numeric metadata column to compute pairwise Euclidean distances from">
+                <option value="tsv" selected="true">Metadata from TSV</option>
+                <option value="qza">Metadata from Artifact</option>
+            </param>
+            <when value="tsv">
+                <param name="source" type="data" format="tabular,qiime2.tabular" label="Metadata Source"/>
+                <param name="column" type="data_column" label="Column Name" data_ref="source" use_header_names="true">
+                    <validator type="expression" message="The first column cannot be selected (they are IDs).">value != "1"</validator>
+                </param>
+            </when>
+            <when value="qza">
+                <param name="source" type="data" format="qza" label="Metadata Source"/>
+                <param name="column" type="text" label="Column Name">
+                    <validator type="empty_field"/>
+                </param>
+            </when>
+        </conditional>
+    </inputs>
+    <outputs>
+        <data name="distance_matrix" format="qza" label="${tool.name} on ${on_string}: distance_matrix.qza" from_work_dir="distance_matrix.qza"/>
+    </outputs>
+    <tests/>
+    <help>
+QIIME 2: metadata distance-matrix
+=================================
+Create a distance matrix from a numeric Metadata column
+
+
+Outputs:
+--------
+:distance_matrix.qza: &lt;no description&gt;
+
+|  
+
+Description:
+------------
+Create a distance matrix from a numeric metadata column. The Euclidean distance is computed between each pair of samples or features in the column.
+
+Tip: the distance matrix produced by this method can be used as input to the Mantel test available in `q2-diversity`.
+
+
+|  
+
+</help>
+    <citations>
+        <citation type="doi">10.1038/s41587-019-0209-9</citation>
+    </citations>
+</tool>