diff dereplication/README.txt @ 0:88fc52f1c5db draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/dereplication/README.txt	Wed May 28 20:34:11 2014 -0400
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+Galaxy wrappers for USEARCH - Dereplication
+============================================
+
+USEARCH requires a licence. Therefore an automated installation is not
+possible at the moment.
+
+Requirements
+============================================
+
+Get your licenced USEARCH version 7 or greater from here:
+http://www.drive5.com/usearch/download.html
+
+
+Manual Installation Steps
+============================================
+
+USEARCH is distributed as one file, known as the binary file or executable
+file. It is completely self-contained: it does not require configuration
+files, environment variables, third-party libraries or other external
+dependencies. There is no setup script or installer because they're not
+needed. To install it, all you do is download or copy the binary to a
+directory that is accessible from the computer where you want to run the code.
+
+Step1:
+Rename the binary file to usearch.
+
+Step2:
+Move the binary file (usearch) to /usr/local/bin
+Ensure /usr/local/bin is in your path. If needed add /usr/local/bin/ to your
+path.
+
+Step3:
+Ensure that you have read and execute permissions for the binary file.
+If needed, use the chmod command to set the execute bit, e.g.:
+chmod +x /usr/local/bin/usearch
+
+
+Further installation information and help can be found at:
+http://drive5.com/usearch/manual/install.html
+
+
+Disclaimer
+=====================================================
+This source code is provided by QFAB Bioinformatics "as is", in the hope that it will be
+useful, and any express or implied warranties, including, but not limited to,
+the implied warranties of merchantability and fitness for a particular purpose
+are disclaimed.
+IN NO EVENT SHALL QFAB BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY
+OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT(INCLUDING
+NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOURCE
+CODE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+
+License
+=====================================================
+This work by QFAB Bioinformatics (as part of the GVL project
+http://genome.edu.au)
+is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0
+International License.