annotate macros.xml @ 0:72b687d21f65 draft

"planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/filter_compounds commit 4d2ac914c951166e386a94d8ebb8cb1becfac122"

<macros>
    <token name="@TOOL_VERSION@">3.1.1</token>
    <token name="@GALAXY_VERSION@">1</token>
    <xml name="creator">
        <creator>
            <person
                givenName="Karolína"
                familyName="Trachtová"
                url="https://github.com/trachtok" />
            <organization
                url="https://www.recetox.muni.cz/"
                email="[e-mail]"
                name="RECETOX MUNI" />
        </creator>
    </xml>

    <xml name="requirements">
        <requirements>
            <requirement type="package" version="@TOOL_VERSION@">openbabel</requirement>
            <requirement type="package" version="3">python</requirement>
            <yield />
        </requirements>
    </xml>

    <xml name="stdio">
        <stdio>
            <exit_code range="1:" level="fatal" description="Error occurred. Please check Tool Standard Error" />
        </stdio>
    </xml>

    <token name="@HELP@">
        <![CDATA[
            .. class:: infomark

            **What this tool does**

            Filters organometallics (compounds containing atoms other than C|N|O|P|F|S|I|B|Si|Se|Cl|Br|Li|Na|H|K) or
            anorganics (compounds without C). Input can be either list of SMILES identifiers or indexed table of SMILES
            (two tab-separated columns, first column is index, second columns is SMILES).
        ]]>
    </token>
</macros>