Mercurial > repos > richard-burhans > segalign

annotate ungapped_extension_options.xml @ 11:168b0a92edd3 draft

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planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 53e28d4dd9ab352c94f91f952ac855b89197f032
author richard-burhans
date Fri, 12 Jul 2024 23:00:03 +0000
parents 5c72425b7f1b
children
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5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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1 <macros>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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2 <xml name="ungapped_extension_options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
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3 <section name="ungapped_extension_options" expanded="false" title="Ungapped Extension Options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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4 <param argument="--xdrop" type="integer" value="910" label="X-drop value for gap-free extension"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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5 <param argument="--hspthresh" type="integer" value="3000" label="Segment score threshold for high scoring pairs"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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6 <param argument="--noentropy" type="boolean" checked="false" label="Don't adjust low score segment pair scores using entropy factor after filtering stage"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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7 </section>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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8 </xml>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
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9 </macros>