annotate ungapped_extension_options.xml @ 20:96ff17622b17 draft

planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 4b56e02cfd6394c55895dd013105c4ef04519842
author richard-burhans
date Wed, 07 Aug 2024 20:34:45 +0000
parents 5c72425b7f1b
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
1 <macros>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
2 <xml name="ungapped_extension_options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
3 <section name="ungapped_extension_options" expanded="false" title="Ungapped Extension Options">
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
4 <param argument="--xdrop" type="integer" value="910" label="X-drop value for gap-free extension"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
5 <param argument="--hspthresh" type="integer" value="3000" label="Segment score threshold for high scoring pairs"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
6 <param argument="--noentropy" type="boolean" checked="false" label="Don't adjust low score segment pair scores using entropy factor after filtering stage"/>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
7 </section>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
8 </xml>
5c72425b7f1b planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 98a4dd44360447aa96d92143384d78e116d7581b
richard-burhans
parents:
diff changeset
9 </macros>