Mercurial > repos > richard-burhans > segalign

changeset 20:96ff17622b17 draft

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planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/segalign commit 4b56e02cfd6394c55895dd013105c4ef04519842
author richard-burhans
date Wed, 07 Aug 2024 20:34:45 +0000
parents cefa7625d6cb
children 25fa179d9d0a
files runner.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/runner.py	Thu Aug 01 18:39:46 2024 +0000
+++ b/runner.py	Wed Aug 07 20:34:45 2024 +0000
@@ -386,7 +386,7 @@
             beg: int = time.monotonic_ns()
             r_beg = resource.getrusage(resource.RUSAGE_CHILDREN)
 
-        process = subprocess.run(run_args, stdout=subprocess.PIPE, stderr=subprocess.PIPE, text=True)
+        process = subprocess.run(run_args, stdout=subprocess.PIPE, stderr=subprocess.PIPE, bufsize=1, text=True)
 
         for line in process.stdout.splitlines():
             commands.add(line)