Mercurial > repos > rmarenco > psltobed
changeset 2:30fd14cf565c draft
planemo upload commit 8de7919b3e0f263547db7846baaa1c9e092ba00c-dirty
| author | rmarenco |
|---|---|
| date | Thu, 14 Jul 2016 18:03:58 -0400 |
| parents | 868dc60b1260 |
| children | e4bed427031f |
| files | pslToBed.xml tool_dependencies.xml |
| diffstat | 2 files changed, 22 insertions(+), 1 deletions(-) [+] |
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--- a/pslToBed.xml Thu Jul 14 17:59:44 2016 -0400 +++ b/pslToBed.xml Thu Jul 14 18:03:58 2016 -0400 @@ -1,6 +1,6 @@ <tool id="pslToBed" name="pslToBed" version="0.1.0"> <requirements> - <requirement type="package" version="324">ucsc-psltobed</requirement> + <requirement type="package" version="1.0">pslToBed</requirement> </requirements> <stdio> <exit_code range="1:" />
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Jul 14 18:03:58 2016 -0400 @@ -0,0 +1,21 @@ +<?xml version="1.0"?> +<tool_dependency> + <!-- Package blastXmlToPsl --> + <package name="pslToBed" version="1.0"> + <install version="1.0"> + <actions> + <action type="download_binary" target_directory="bin"> + <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/pslToBed</url_template> + <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/pslToBed</url_template> + </action> + <action type="chmod"> + <file mode="750">$INSTALL_DIR/bin/pslToBed</file> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + <readme>The tools downloaded by this dependency definition are free for academic use.</readme> + </package> +</tool_dependency> \ No newline at end of file