Mercurial > repos > rnateam > metilene
annotate tool_dependencies.xml @ 2:3dbc8ee72d39 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 9d8962636c9b7e9370770ce343de332201ff9fe3-dirty
author | rnateam |
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date | Tue, 23 Feb 2016 07:28:12 -0500 |
parents | a538bbdae31b |
children | df838db0b597 |
rev | line source |
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0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
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1 <?xml version="1.0"?> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
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2 <tool_dependency> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
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3 <package name="perl" version="5.18.1"> |
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a538bbdae31b
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit f332463404ef478e78d3ff4583b806dd68dfd3af-dirty
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4 <repository changeset_revision="d905bb415eca" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
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0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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5 </package> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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6 <package name="bedtools" version="2.24"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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7 <repository changeset_revision="39b86c1e267d" name="package_bedtools_2_24" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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8 </package> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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9 <package name="gnu_coreutils" version="8.22"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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10 <repository changeset_revision="ac64dfe4b1fb" name="package_gnu_coreutils_8_22" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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11 </package> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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12 <package name="ggplot2" version="0.9.3"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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13 <repository changeset_revision="07de191649b4" name="package_r_ggplot2_0_9_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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14 </package> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
diff
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15 <package name="metilene" version="0.2-4"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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16 <install version="1.0"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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17 <actions> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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18 <action sha256sum="7430b4c2af4f43d389ad690dfe42c9ce7a63b2bff4ff0ac59afc0f1ec7e600f2" type="download_by_url"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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19 https://depot.galaxyproject.org/software/metilene/metilene_0.2-4_src_all.tar.gz |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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20 </action> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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21 <action type="shell_command">make</action> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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22 <!-- move binary and scripts to installation bin directory --> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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23 <action type="move_file"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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24 <source>metilene</source> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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25 <destination>$INSTALL_DIR/bin</destination> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
diff
changeset
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26 </action> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
diff
changeset
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27 <action type="move_file"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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28 <source>metilene_input.pl</source> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
diff
changeset
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29 <destination>$INSTALL_DIR/bin</destination> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
diff
changeset
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30 </action> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
diff
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31 <action type="move_file"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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32 <source>metilene_output.pl</source> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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33 <destination>$INSTALL_DIR/bin</destination> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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34 </action> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
diff
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35 <action type="move_file"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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36 <source>metilene_output.R</source> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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37 <destination>$INSTALL_DIR/bin</destination> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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38 </action> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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39 |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
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40 <action type="set_environment"> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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41 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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42 </action> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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43 </actions> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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44 </install> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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45 <readme>Metilene is precompiled for Linux</readme> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
parents:
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46 </package> |
0d988a56e332
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/metilene commit 090bc9bb5c775600f4727d8729a032b52e78bd05-dirty
rnateam
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47 </tool_dependency> |