diff test-data/test_structure_final_model.xml @ 0:4b01f0d7b350 draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/sshmm/ commit b578a90031fd7061fbdaef48b6a66d895ac077c3

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_structure_final_model.xml	Fri Jul 06 09:01:40 2018 -0400
@@ -0,0 +1,584 @@
+<?xml version="1.0" encoding="ISO-8859-1"?>
+<!DOCTYPE mixture PUBLIC "-//ghmm.org//DOCUMENT ghmm V1.0//EN" "http://ghmm.sourceforge.net/xml/1.0/ghmm.dtd">
+<mixture version="1.0" noComponents="1">
+ <HMM name="stateHMM" type="labeled discrete">
+  <alphabet id="0">
+   <symbol code="0">A</symbol>
+   <symbol code="1">C</symbol>
+   <symbol code="2">G</symbol>
+   <symbol code="3">T</symbol>
+   <symbol code="4">+</symbol>
+   <symbol code="5">#</symbol>
+  </alphabet>
+  <classAlphabet>
+   <symbol code="0">St</symbol>
+   <symbol code="1">E1</symbol>
+   <symbol code="2">I1</symbol>
+   <symbol code="3">S1</symbol>
+   <symbol code="4">H1</symbol>
+   <symbol code="5">M1</symbol>
+   <symbol code="6">E2</symbol>
+   <symbol code="7">I2</symbol>
+   <symbol code="8">S2</symbol>
+   <symbol code="9">H2</symbol>
+   <symbol code="10">M2</symbol>
+   <symbol code="11">E3</symbol>
+   <symbol code="12">I3</symbol>
+   <symbol code="13">S3</symbol>
+   <symbol code="14">H3</symbol>
+   <symbol code="15">M3</symbol>
+   <symbol code="16">E4</symbol>
+   <symbol code="17">I4</symbol>
+   <symbol code="18">S4</symbol>
+   <symbol code="19">H4</symbol>
+   <symbol code="20">M4</symbol>
+   <symbol code="21">E5</symbol>
+   <symbol code="22">I5</symbol>
+   <symbol code="23">S5</symbol>
+   <symbol code="24">H5</symbol>
+   <symbol code="25">M5</symbol>
+   <symbol code="26">E6</symbol>
+   <symbol code="27">I6</symbol>
+   <symbol code="28">S6</symbol>
+   <symbol code="29">H6</symbol>
+   <symbol code="30">M6</symbol>
+   <symbol code="31">En</symbol>
+  </classAlphabet>
+  <state id="0" initial="1.00000000">
+   <discrete id="0">0, 0, 0, 0, 1, 0</discrete>
+   <class>0</class>
+  </state>
+  <state id="1" initial="0.00000000">
+   <discrete id="0">0.4, 0.2, 0.2, 0.2, 0, 0</discrete>
+   <class>1</class>
+  </state>
+  <state id="2" initial="0.00000000">
+   <discrete id="0">0.25, 0.25, 0.25, 0.25, 0, 0</discrete>
+   <class>2</class>
+  </state>
+  <state id="3" initial="0.00000000">
+   <discrete id="0">0.41176471, 0.11764706, 0.35294118, 0.11764706, 0, 0</discrete>
+   <class>3</class>
+  </state>
+  <state id="4" initial="0.00000000">
+   <discrete id="0">0.25, 0.25, 0.25, 0.25, 0, 0</discrete>
+   <class>4</class>
+  </state>
+  <state id="5" initial="0.00000000">
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+   <class>5</class>
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+   <class>6</class>
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+   <class>7</class>
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+   <class>8</class>
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+   <class>10</class>
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