Mercurial > repos > romaingred > pirna_pipeline
diff bin/piPipe.pl @ 50:d9059a181872 draft
Uploaded
| author | romaingred |
|---|---|
| date | Fri, 01 Dec 2017 09:33:09 -0500 |
| parents | 71ac58e0d5be |
| children |
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--- a/bin/piPipe.pl Fri Dec 01 08:54:25 2017 -0500 +++ b/bin/piPipe.pl Fri Dec 01 09:33:09 2017 -0500 @@ -119,7 +119,7 @@ my $fastq_resized = $dir_fq.$name.'_'.$min.'-'.$max.'.fastq'; size_distribution ( $fastq[$child], $fastq_resized, $size_dir, $min, $max ); - my $sam_genome = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max.'sam'; + my $sam_genome = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max.'.sam'; my $sam_genome_unique = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max.'_unique.sam'; my $fastq_prefix = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max;