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planemo upload for repository https://gitlab.pasteur.fr/galaxy-team/galaxy-tools/-/tree/master/tools/ccqtl commit ac8fec726c224fad58f9451042f6f62f180c8c5c
author rplanel
date Fri, 29 Sep 2023 14:58:06 +0000
parents 6b6c9ab21674
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# <unique_build_id>	<dbkey>	<display_name>	<build>	<doi>	<description>	<optional_description>	<file_base_path>

# CC_MMnGM	indiv_marker	CC_MMnGM	m38		individual genotypes of each CC mouse at each marker and the funnel codes if applicable. (mega muga and giga muga)		tool-data/ccqtl/indiv_marker/CC_MMnGM_ref
# MMnGM_m38	marker_set	MMnGM_m38	m38	https://figshare.com/articles/dataset/MMnGM_processed_files_zip/5404762/2	Marker set for mega muga and giga muga		tool-data/ccqtl/marker_set/MMnGM_m38
# MM_m38	marker_set	MM_m38	m38	https://figshare.com/articles/dataset/MM_processed_files_zip/5404750/2	Marker set for mega muga		tool-data/ccqtl/marker_set/MM_m38
# cc_variants_m38	cc_variants	CC founders variants m38	m38	10.6084/m9.figshare.5280229.v3	DNA seq variants segregating among the founders		tool-data/ccqtl/annotations/m38/cc_variants.sqlite
# mouse_genes_mgi_m38	genes	Mouse genes mgi m38	m38	10.6084/m9.figshare.5286019.v8	gene annotation, subsetted to MGI annot		tool-data/ccqtl/annotations/m38/mouse_genes_mgi.sqlite