annotate tool_dependencies.xml @ 1:fcc46fdac26b draft

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
author rsajulga
date Fri, 08 Mar 2019 15:21:47 -0500
parents bdc077ef0cdd
children b05bd4bbb376
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fcc46fdac26b planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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1 <?xml version="1.0"?>
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bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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2 <tool_dependency>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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3 <package name="numpy" version="1.9">
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fcc46fdac26b planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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4 <repository changeset_revision="57b37f63cb84" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
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bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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5 </package>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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6 <package name="humann2" version="0.6.1">
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fcc46fdac26b planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
parents: 0
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7 <repository changeset_revision="655e87ac3364" name="package_humann2_0_6_1" owner="bebatut" toolshed="https://toolshed.g2.bx.psu.edu" />
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bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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8 </package>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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9 <package name="goatools" version="0.6.4">
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fcc46fdac26b planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
parents: 0
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10 <repository changeset_revision="25b614b3491f" name="package_goatools_0_6_4" owner="bebatut" toolshed="https://toolshed.g2.bx.psu.edu" />
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bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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11 </package>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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12 <package name="group_humann2_uniref_abundances_to_go" version="1.2.0">
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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13 <install version="1.0">
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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14 <actions>
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fcc46fdac26b planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
parents: 0
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15 <action type="download_by_url">https://github.com/ASaiM/group_humann2_uniref_abundances_to_GO/archive/v1.2.0.zip</action>
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bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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16 <action type="move_directory_files">
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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17 <source_directory>.</source_directory>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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18 <destination_directory>$INSTALL_DIR/</destination_directory>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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19 </action>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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20 <action type="set_environment">
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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21 <environment_variable action="set_to" name="GROUP_UNIREF_GO_DIR">$INSTALL_DIR/</environment_variable>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
parents:
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22 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
parents:
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23 </action>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
parents:
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24 </actions>
bdc077ef0cdd planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
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25 </install>
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fcc46fdac26b planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
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26 <readme />
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27 </package>
1
fcc46fdac26b planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
rsajulga
parents: 0
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28 </tool_dependency>