Mercurial > repos > ryanmorin > nextgen_variant_identification

view tool_conf.xml.sample @ 5:a4975ec34575

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author ryanmorin
date Mon, 17 Oct 2011 14:57:09 -0400
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#add the following section to your file to enable these tools
 <section name="NGS: Variant Calling" id="SNV">
 <label text="SNV pipeline" id="SNV" />
    <tool file="SNV/snvmix.xml" />
    <tool file="SNV/snvmix2.xml" />
    <tool file="SNV/filter_snvmix.xml" />
    <tool file="SNV/snp_filters.xml" />
    <tool file="SNV/annotate.xml" />
    <tool file="SNV/filter_snvmix_somatic.xml" />
  </section>