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1 #Installation instructions for microPITA in a galaxy environment.
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2 These instructions require the Mercurial versioning system, galaxy, and an internet connection.
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3
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4 #For general reference about microPita please refer to:
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5 ```
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6 https://bitbucket.org/biobakery/micropita
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7 ```
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8
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9
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10
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11
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12 #Installation Instructions
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13 In the "galaxy-dist/tools" directory install micropita by typing in a terminal:
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14 ```
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15 hg clone https://bitbucket.org/biobakery/micropita
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16 ```
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17
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18
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19 Update member tool_conf.xml in the galaxy directory adding the following:
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20 ```
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21 <section name="micropita" id="micropita">
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22 <tool file="micropita/galaxy/micropita.xml"/>
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23 </section>
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24 ```
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25
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26 Update member datatypes_conf.xml in the galaxy directory adding the following:
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27 ```
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28 <datatype extension="micropita" type="galaxy.datatypes.data:Text" subclass="true" display_in_upload="true"/>
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29 ```
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30
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31 Copy the 2 *.png members to /galaxy/static/images
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32
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33 Recycle galaxy
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