0
|
1 Galaxy wrapper for the FATHMM webservice
|
|
2 ===================================================
|
|
3
|
|
4 This tool is copyright 2014 by Saket Choudhary<saketkc@gmail.com>, Indian Institute of Technology Bombay
|
|
5 All rights reserved. MIT licensed.
|
|
6
|
|
7 Licence (MIT)
|
|
8 =============
|
|
9
|
|
10 Permission is hereby granted, free of charge, to any person obtaining a copy
|
|
11 of this software and associated documentation files (the "Software"), to deal
|
|
12 in the Software without restriction, including without limitation the rights
|
|
13 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
|
|
14 copies of the Software, and to permit persons to whom the Software is
|
|
15 furnished to do so, subject to the following conditions:
|
|
16
|
|
17 The above copyright notice and this permission notice shall be included in
|
|
18 all copies or substantial portions of the Software.
|
|
19
|
|
20 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
|
|
21 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
|
|
22 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
|
|
23 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
|
|
24 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
|
|
25 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
|
|
26 THE SOFTWARE.
|
|
27
|
|
28 Citations
|
|
29 ===========
|
|
30
|
|
31
|
|
32 If you use this tool in Galaxy, please cite :
|
|
33
|
|
34 Shihab HA, Gough J, Cooper DN, Stenson PD, Barker GLA, Edwards KJ, Day INM, Gaunt, TR. (2013).
|
|
35 Predicting the Functional, Molecular and PhenotypicConsequences of Amino Acid Substitutions using
|
|
36 Hidden Markov Models. Hum. Mutat., 34:57-65
|
|
37
|
|
38
|
|
39 Shihab HA, Gough J, Cooper DN, Day INM, Gaunt, TR. (2013). Predicting the Functional Consequences
|
|
40 of Cancer-Associated Amino Acid Substitutions. Bioinformatics 29:1504-1510.
|
|
41
|
|
42
|
|
43 Shihab HA, Gough J, Mort M, Cooper DN, Day INM, Gaunt, TR. (2014).
|
|
44 Ranking Non-Synonymous Single Nucleotide Polymorphisms based on Disease Concepts. In Press
|