Mercurial > repos > saket-choudhary > fathmm_web
comparison fathmm/README.rst @ 0:fd66648ce5f9 draft default tip
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| author | saket-choudhary |
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| date | Tue, 07 Oct 2014 19:25:07 -0400 |
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| -1:000000000000 | 0:fd66648ce5f9 |
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| 1 Galaxy wrapper for the FATHMM webservice | |
| 2 =================================================== | |
| 3 | |
| 4 This tool is copyright 2014 by Saket Choudhary<saketkc@gmail.com>, Indian Institute of Technology Bombay | |
| 5 All rights reserved. MIT licensed. | |
| 6 | |
| 7 Licence (MIT) | |
| 8 ============= | |
| 9 | |
| 10 Permission is hereby granted, free of charge, to any person obtaining a copy | |
| 11 of this software and associated documentation files (the "Software"), to deal | |
| 12 in the Software without restriction, including without limitation the rights | |
| 13 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell | |
| 14 copies of the Software, and to permit persons to whom the Software is | |
| 15 furnished to do so, subject to the following conditions: | |
| 16 | |
| 17 The above copyright notice and this permission notice shall be included in | |
| 18 all copies or substantial portions of the Software. | |
| 19 | |
| 20 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | |
| 21 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | |
| 22 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE | |
| 23 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | |
| 24 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | |
| 25 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN | |
| 26 THE SOFTWARE. | |
| 27 | |
| 28 Citations | |
| 29 =========== | |
| 30 | |
| 31 | |
| 32 If you use this tool in Galaxy, please cite : | |
| 33 | |
| 34 Shihab HA, Gough J, Cooper DN, Stenson PD, Barker GLA, Edwards KJ, Day INM, Gaunt, TR. (2013). | |
| 35 Predicting the Functional, Molecular and PhenotypicConsequences of Amino Acid Substitutions using | |
| 36 Hidden Markov Models. Hum. Mutat., 34:57-65 | |
| 37 | |
| 38 | |
| 39 Shihab HA, Gough J, Cooper DN, Day INM, Gaunt, TR. (2013). Predicting the Functional Consequences | |
| 40 of Cancer-Associated Amino Acid Substitutions. Bioinformatics 29:1504-1510. | |
| 41 | |
| 42 | |
| 43 Shihab HA, Gough J, Mort M, Cooper DN, Day INM, Gaunt, TR. (2014). | |
| 44 Ranking Non-Synonymous Single Nucleotide Polymorphisms based on Disease Concepts. In Press |