Mercurial > repos > sauria > hifive
changeset 8:0b5a01448cb5 draft
planemo upload for repository https://github.com/bxlab/galaxy_tools/suites/suite_hifive commit 225579f0fe2a3a5fb846db38eca83020a945beb3
| author | sauria |
|---|---|
| date | Fri, 13 Jan 2017 13:57:11 -0500 |
| parents | 20dfaec1678c |
| children | fb53ebc92f14 |
| files | hifive.xml hifive_macros.xml tool_dependencies.xml |
| diffstat | 3 files changed, 16 insertions(+), 4 deletions(-) [+] |
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--- a/hifive.xml Thu Feb 11 11:08:06 2016 -0500 +++ b/hifive.xml Fri Jan 13 13:57:11 2017 -0500 @@ -408,4 +408,16 @@ @HIC_HELP@ @5C_HELP@ ]]></help> + <citations> + <citation type="bibtex"> + @article{Genome Biology, + author = {Sauria MEG, Phillips-Cremins JE, Corces VG and Taylor J}. + year = {2015}, + title = {HiFive: a tool suite for easy and efficient HiC and 5C data analysis}, + publisher = {BioMed Central}, + journal = {Genome Biology}, + url = {https://genomebiology.biomedcentral.com/articles/10.1186/s13059-015-0806-y}, + } + </citation> + </citations> </tool>
--- a/hifive_macros.xml Thu Feb 11 11:08:06 2016 -0500 +++ b/hifive_macros.xml Fri Jan 13 13:57:11 2017 -0500 @@ -2,7 +2,7 @@ <macros> <xml name="requirements"> <requirements> - <requirement type='package' version="1.2">hifive</requirement> + <requirement type='package' version="1.3">hifive</requirement> <requirement type='package' version='0.12'>scipy</requirement> <requirement type='package' version='0.20.1'>cython</requirement> <requirement type='package' version='2.5.0'>h5py</requirement>
--- a/tool_dependencies.xml Thu Feb 11 11:08:06 2016 -0500 +++ b/tool_dependencies.xml Fri Jan 13 13:57:11 2017 -0500 @@ -7,12 +7,12 @@ <repository changeset_revision="300877695495" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="cython" version="0.20.1"> - <repository changeset_revision="c3a8c46fcb97" name="package_cython_0_20_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> + <repository changeset_revision="bf766623094e" name="package_cython_0_20_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="h5py" version="2.5.0"> <repository changeset_revision="cc1a2aae5057" name="package_h5py_2_5_0" owner="sauria" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> - <package name="hifive" version="1.2"> - <repository changeset_revision="621925aadc25" name="package_hifive_1_2" owner="sauria" toolshed="https://toolshed.g2.bx.psu.edu" /> + <package name="hifive" version="1.3"> + <repository changeset_revision="a1a962713395" name="package_hifive_1_3" owner="sauria" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> </tool_dependency>