Mercurial > repos > sauria > package_h5py_2_5_0
annotate tool_dependencies.xml @ 0:cc1a2aae5057 draft default tip
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
author | sauria |
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date | Fri, 05 Jun 2015 14:06:02 -0400 |
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cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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1 <?xml version="1.0"?> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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2 <tool_dependency> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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3 <package name="hdf5" version="1.8.12"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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4 <repository changeset_revision="85dfbc5ffda7" name="package_hdf5_1_8_12" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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5 </package> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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6 <package name="numpy" version="1.7.1"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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7 <repository changeset_revision="8b3a5c7061d8" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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8 </package> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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9 <package name="cython" version="0.20.1"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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10 <repository changeset_revision="c3a8c46fcb97" name="package_cython_0_20_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
sauria
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11 </package> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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12 <package name="h5py" version="2.5.0"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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13 <install version="1.0"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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14 <actions> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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15 <action type="download_by_url">https://pypi.python.org/packages/source/h/h5py/h5py-2.5.0.tar.gz</action> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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16 <action type="set_environment_for_install"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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17 <repository changeset_revision="85dfbc5ffda7" name="package_hdf5_1_8_12" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
sauria
parents:
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18 <package name="hdf5" version="1.8.12" /> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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19 </repository> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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20 <repository changeset_revision="8b3a5c7061d8" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
sauria
parents:
diff
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21 <package name="numpy" version="1.7.1" /> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
sauria
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22 </repository> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
sauria
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23 <repository changeset_revision="c3a8c46fcb97" name="package_cython_0_20_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
sauria
parents:
diff
changeset
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24 <package name="cython" version="0.20.1" /> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
sauria
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25 </repository> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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26 <environment_variable action="set_to" name="HDF5_DIR">$HDF5_LIBRARY_PATH</environment_variable> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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27 </action> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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28 <action type="make_directory">$INSTALL_DIR/lib/python</action> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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29 <action type="shell_command"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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30 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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31 python setup.py install --install-lib $INSTALL_DIR/lib/python |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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32 </action> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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33 <action type="set_environment"> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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34 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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35 <environment_variable action="set_to" name="PYTHONPATH_H5PY">$INSTALL_DIR/lib/python</environment_variable> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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36 </action> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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37 </actions> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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38 </install> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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39 <readme> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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40 Compiling h5py requires cython. |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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41 </readme> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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42 </package> |
cc1a2aae5057
planemo upload for repository https://github.com/bxlab/galaxy_tools/packages/package_h5py_2_5_0 commit abaefa638db82abe90f335d783c9503dce28944f-dirty
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43 </tool_dependency> |