Mercurial > repos > shellac > guppy_basecaller
annotate env/lib/python3.7/site-packages/gxformat2/_scripts.py @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
| author | shellac |
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| date | Sat, 02 May 2020 07:14:21 -0400 |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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1 """Utilities for scripts in gxformat2.""" |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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2 from gxformat2.export import from_galaxy_native |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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3 |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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5 def ensure_format2(workflow_dict): |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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6 """Consume a dictionary and ensure the result is format2. |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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7 |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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8 So convert from ga if needed. |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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9 """ |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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10 if workflow_dict.get("a_galaxy_workflow") == "true": |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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11 workflow_dict = from_galaxy_native(workflow_dict) |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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12 return workflow_dict |
