Mercurial > repos > shellac > guppy_basecaller
annotate env/lib/python3.7/site-packages/gxformat2/_yaml.py @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
| author | shellac |
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| date | Sat, 02 May 2020 07:14:21 -0400 |
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1 """YAML loading utilities for gxformat2.""" |
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2 from collections import OrderedDict |
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3 |
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4 try: |
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5 from galaxy.model.custom_types import MutationDict |
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6 except ImportError: |
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7 MutationDict = None |
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8 import yaml |
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9 |
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10 |
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11 def ordered_load(stream, Loader=yaml.SafeLoader, **kwds): |
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12 """Safe and ordered load of YAML from stream.""" |
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13 class OrderedLoader(Loader): |
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14 pass |
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15 |
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16 def construct_mapping(loader, node): |
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17 loader.flatten_mapping(node) |
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18 return OrderedDict(loader.construct_pairs(node)) |
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19 |
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20 OrderedLoader.add_constructor( |
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21 yaml.resolver.BaseResolver.DEFAULT_MAPPING_TAG, |
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22 construct_mapping) |
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23 |
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24 return yaml.load(stream, OrderedLoader, **kwds) |
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25 |
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26 |
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27 def ordered_dump(data, stream=None, Dumper=yaml.SafeDumper, **kwds): |
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28 """Safe and ordered dump of YAML to stream.""" |
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29 class OrderedDumper(Dumper): |
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30 pass |
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31 |
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32 def _dict_representer(dumper, data): |
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33 return dumper.represent_mapping( |
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34 yaml.resolver.BaseResolver.DEFAULT_MAPPING_TAG, |
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35 list(data.items())) |
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36 OrderedDumper.add_representer(OrderedDict, _dict_representer) |
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37 if MutationDict is not None: |
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38 OrderedDumper.add_representer(MutationDict, _dict_representer) |
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39 |
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40 return yaml.dump(data, stream, OrderedDumper, **kwds) |
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41 |
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42 |
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43 __all__ = ( |
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44 'ordered_dump', |
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45 'ordered_load', |
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46 ) |
