annotate env/lib/python3.9/site-packages/cwltool/schemas/v1.2.0-dev4/Process.yml @ 0:4f3585e2f14b draft default tip

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author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 saladVersion: v1.1
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2 $base: "https://w3id.org/cwl/cwl#"
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3
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4 $namespaces:
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5 cwl: "https://w3id.org/cwl/cwl#"
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6 sld: "https://w3id.org/cwl/salad#"
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7 rdfs: "http://www.w3.org/2000/01/rdf-schema#"
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8
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9 $graph:
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10
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11 - name: "Common Workflow Language, v1.2.0-dev4"
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12 type: documentation
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13 doc: {$include: concepts.md}
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14
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15 - $import: "salad/schema_salad/metaschema/metaschema_base.yml"
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16
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17 - name: BaseTypesDoc
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18 type: documentation
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19 doc: |
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20 ## Base types
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21 docChild:
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22 - "#CWLType"
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23 - "#Process"
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24
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25 - type: enum
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26 name: CWLVersion
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27 doc: "Version symbols for published CWL document versions."
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28 symbols:
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29 - cwl:draft-2
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30 - cwl:draft-3.dev1
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31 - cwl:draft-3.dev2
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32 - cwl:draft-3.dev3
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33 - cwl:draft-3.dev4
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34 - cwl:draft-3.dev5
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35 - cwl:draft-3
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36 - cwl:draft-4.dev1
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37 - cwl:draft-4.dev2
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38 - cwl:draft-4.dev3
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39 - cwl:v1.0.dev4
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40 - cwl:v1.0
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41 - cwl:v1.1.0-dev1 # a dash is required by the semver 2.0 rules
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42 - cwl:v1.1
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43 - cwl:v1.2.0-dev1
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44 - cwl:v1.2.0-dev2
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45 - cwl:v1.2.0-dev3
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46 - cwl:v1.2.0-dev4
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47
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48 - name: CWLType
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49 type: enum
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50 extends: "sld:PrimitiveType"
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51 symbols:
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52 - cwl:File
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53 - cwl:Directory
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54 doc:
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55 - "Extends primitive types with the concept of a file and directory as a builtin type."
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56 - "File: A File object"
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57 - "Directory: A Directory object"
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58
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59 - name: File
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60 type: record
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61 docParent: "#CWLType"
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62 doc: |
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63 Represents a file (or group of files when `secondaryFiles` is provided) that
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64 will be accessible by tools using standard POSIX file system call API such as
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65 open(2) and read(2).
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66
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67 Files are represented as objects with `class` of `File`. File objects have
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68 a number of properties that provide metadata about the file.
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69
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70 The `location` property of a File is a URI that uniquely identifies the
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71 file. Implementations must support the file:// URI scheme and may support
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72 other schemes such as http://. The value of `location` may also be a
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73 relative reference, in which case it must be resolved relative to the URI
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74 of the document it appears in. Alternately to `location`, implementations
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75 must also accept the `path` property on File, which must be a filesystem
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76 path available on the same host as the CWL runner (for inputs) or the
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77 runtime environment of a command line tool execution (for command line tool
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78 outputs).
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79
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80 If no `location` or `path` is specified, a file object must specify
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81 `contents` with the UTF-8 text content of the file. This is a "file
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82 literal". File literals do not correspond to external resources, but are
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83 created on disk with `contents` with when needed for a executing a tool.
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84 Where appropriate, expressions can return file literals to define new files
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85 on a runtime. The maximum size of `contents` is 64 kilobytes.
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86
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87 The `basename` property defines the filename on disk where the file is
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88 staged. This may differ from the resource name. If not provided,
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89 `basename` must be computed from the last path part of `location` and made
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90 available to expressions.
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91
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92 The `secondaryFiles` property is a list of File or Directory objects that
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93 must be staged in the same directory as the primary file. It is an error
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94 for file names to be duplicated in `secondaryFiles`.
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95
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96 The `size` property is the size in bytes of the File. It must be computed
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97 from the resource and made available to expressions. The `checksum` field
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98 contains a cryptographic hash of the file content for use it verifying file
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99 contents. Implementations may, at user option, enable or disable
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100 computation of the `checksum` field for performance or other reasons.
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101 However, the ability to compute output checksums is required to pass the
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102 CWL conformance test suite.
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103
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104 When executing a CommandLineTool, the files and secondary files may be
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105 staged to an arbitrary directory, but must use the value of `basename` for
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106 the filename. The `path` property must be file path in the context of the
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107 tool execution runtime (local to the compute node, or within the executing
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108 container). All computed properties should be available to expressions.
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109 File literals also must be staged and `path` must be set.
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110
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111 When collecting CommandLineTool outputs, `glob` matching returns file paths
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112 (with the `path` property) and the derived properties. This can all be
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113 modified by `outputEval`. Alternately, if the file `cwl.output.json` is
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114 present in the output, `outputBinding` is ignored.
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115
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116 File objects in the output must provide either a `location` URI or a `path`
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117 property in the context of the tool execution runtime (local to the compute
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118 node, or within the executing container).
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119
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120 When evaluating an ExpressionTool, file objects must be referenced via
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121 `location` (the expression tool does not have access to files on disk so
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122 `path` is meaningless) or as file literals. It is legal to return a file
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123 object with an existing `location` but a different `basename`. The
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124 `loadContents` field of ExpressionTool inputs behaves the same as on
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125 CommandLineTool inputs, however it is not meaningful on the outputs.
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126
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127 An ExpressionTool may forward file references from input to output by using
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128 the same value for `location`.
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129
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130 fields:
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131 - name: class
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132 type:
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133 type: enum
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134 name: File_class
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135 symbols:
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136 - cwl:File
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137 jsonldPredicate:
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138 _id: "@type"
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139 _type: "@vocab"
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140 doc: Must be `File` to indicate this object describes a file.
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141 - name: location
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142 type: string?
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143 doc: |
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144 An IRI that identifies the file resource. This may be a relative
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145 reference, in which case it must be resolved using the base IRI of the
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146 document. The location may refer to a local or remote resource; the
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147 implementation must use the IRI to retrieve file content. If an
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148 implementation is unable to retrieve the file content stored at a
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149 remote resource (due to unsupported protocol, access denied, or other
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150 issue) it must signal an error.
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151
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152 If the `location` field is not provided, the `contents` field must be
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153 provided. The implementation must assign a unique identifier for
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154 the `location` field.
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155
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156 If the `path` field is provided but the `location` field is not, an
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157 implementation may assign the value of the `path` field to `location`,
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158 then follow the rules above.
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159 jsonldPredicate:
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160 _id: "@id"
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161 _type: "@id"
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162 - name: path
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163 type: string?
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164 doc: |
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165 The local host path where the File is available when a CommandLineTool is
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166 executed. This field must be set by the implementation. The final
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167 path component must match the value of `basename`. This field
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168 must not be used in any other context. The command line tool being
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169 executed must be able to to access the file at `path` using the POSIX
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170 `open(2)` syscall.
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171
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172 As a special case, if the `path` field is provided but the `location`
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173 field is not, an implementation may assign the value of the `path`
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174 field to `location`, and remove the `path` field.
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175
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176 If the `path` contains [POSIX shell metacharacters](http://pubs.opengroup.org/onlinepubs/9699919799/utilities/V3_chap02.html#tag_18_02)
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177 (`|`,`&`, `;`, `<`, `>`, `(`,`)`, `$`,`` ` ``, `\`, `"`, `'`,
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178 `<space>`, `<tab>`, and `<newline>`) or characters
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179 [not allowed](http://www.iana.org/assignments/idna-tables-6.3.0/idna-tables-6.3.0.xhtml)
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180 for [Internationalized Domain Names for Applications](https://tools.ietf.org/html/rfc6452)
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181 then implementations may terminate the process with a
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182 `permanentFailure`.
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183 jsonldPredicate:
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184 "_id": "cwl:path"
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185 "_type": "@id"
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186 - name: basename
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187 type: string?
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188 doc: |
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189 The base name of the file, that is, the name of the file without any
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190 leading directory path. The base name must not contain a slash `/`.
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191
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192 If not provided, the implementation must set this field based on the
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193 `location` field by taking the final path component after parsing
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194 `location` as an IRI. If `basename` is provided, it is not required to
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195 match the value from `location`.
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196
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197 When this file is made available to a CommandLineTool, it must be named
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198 with `basename`, i.e. the final component of the `path` field must match
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199 `basename`.
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200 jsonldPredicate: "cwl:basename"
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201 - name: dirname
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202 type: string?
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203 doc: |
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204 The name of the directory containing file, that is, the path leading up
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205 to the final slash in the path such that `dirname + '/' + basename ==
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206 path`.
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207
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208 The implementation must set this field based on the value of `path`
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209 prior to evaluating parameter references or expressions in a
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210 CommandLineTool document. This field must not be used in any other
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211 context.
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212 - name: nameroot
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213 type: string?
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214 doc: |
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215 The basename root such that `nameroot + nameext == basename`, and
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216 `nameext` is empty or begins with a period and contains at most one
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217 period. For the purposess of path splitting leading periods on the
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218 basename are ignored; a basename of `.cshrc` will have a nameroot of
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219 `.cshrc`.
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220
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221 The implementation must set this field automatically based on the value
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222 of `basename` prior to evaluating parameter references or expressions.
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223 - name: nameext
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224 type: string?
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225 doc: |
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226 The basename extension such that `nameroot + nameext == basename`, and
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227 `nameext` is empty or begins with a period and contains at most one
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228 period. Leading periods on the basename are ignored; a basename of
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229 `.cshrc` will have an empty `nameext`.
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230
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231 The implementation must set this field automatically based on the value
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232 of `basename` prior to evaluating parameter references or expressions.
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233 - name: checksum
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234 type: string?
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235 doc: |
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236 Optional hash code for validating file integrity. Currently must be in the form
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237 "sha1$ + hexadecimal string" using the SHA-1 algorithm.
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238 - name: size
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239 type: long?
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240 doc: Optional file size
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241 - name: "secondaryFiles"
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242 type:
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243 - "null"
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244 - type: array
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245 items: [File, Directory]
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246 jsonldPredicate:
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247 _id: "cwl:secondaryFiles"
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248 secondaryFilesDSL: true
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249 doc: |
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250 A list of additional files or directories that are associated with the
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251 primary file and must be transferred alongside the primary file.
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252 Examples include indexes of the primary file, or external references
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253 which must be included when loading primary document. A file object
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254 listed in `secondaryFiles` may itself include `secondaryFiles` for
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255 which the same rules apply.
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256 - name: format
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257 type: string?
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258 jsonldPredicate:
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259 _id: cwl:format
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260 _type: "@id"
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261 identity: true
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262 doc: |
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263 The format of the file: this must be an IRI of a concept node that
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264 represents the file format, preferrably defined within an ontology.
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265 If no ontology is available, file formats may be tested by exact match.
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266
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267 Reasoning about format compatability must be done by checking that an
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268 input file format is the same, `owl:equivalentClass` or
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269 `rdfs:subClassOf` the format required by the input parameter.
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270 `owl:equivalentClass` is transitive with `rdfs:subClassOf`, e.g. if
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271 `<B> owl:equivalentClass <C>` and `<B> owl:subclassOf <A>` then infer
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272 `<C> owl:subclassOf <A>`.
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273
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274 File format ontologies may be provided in the "$schema" metadata at the
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275 root of the document. If no ontologies are specified in `$schema`, the
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276 runtime may perform exact file format matches.
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277 - name: contents
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278 type: string?
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279 doc: |
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280 File contents literal.
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281
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282 If neither `location` nor `path` is provided, `contents` must be
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283 non-null. The implementation must assign a unique identifier for the
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284 `location` field. When the file is staged as input to CommandLineTool,
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285 the value of `contents` must be written to a file.
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286
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287 If `contents` is set as a result of an Javascript expression,
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288 an `entry` in `InitialWorkDirRequirement`, or read in from
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289 `cwl.output.json`, there is no specified upper limit on the
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290 size of `contents`. Implementations may have practical limits
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291 on the size of `contents` based on memory and storage
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292 available to the workflow runner or other factors.
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293
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294 If the `loadContents` field of an `InputParameter` or
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295 `OutputParameter` is true, and the input or output File object
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296 `location` is valid, the file must be a UTF-8 text file 64 KiB
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297 or smaller, and the implementation must read the entire
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298 contents of the file and place it in the `contents` field. If
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299 the size of the file is greater than 64 KiB, the
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300 implementation must raise a fatal error.
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301
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302
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303 - name: Directory
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304 type: record
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305 docAfter: "#File"
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306 doc: |
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307 Represents a directory to present to a command line tool.
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308
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309 Directories are represented as objects with `class` of `Directory`. Directory objects have
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310 a number of properties that provide metadata about the directory.
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311
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312 The `location` property of a Directory is a URI that uniquely identifies
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313 the directory. Implementations must support the file:// URI scheme and may
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314 support other schemes such as http://. Alternately to `location`,
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315 implementations must also accept the `path` property on Directory, which
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316 must be a filesystem path available on the same host as the CWL runner (for
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317 inputs) or the runtime environment of a command line tool execution (for
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318 command line tool outputs).
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319
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320 A Directory object may have a `listing` field. This is a list of File and
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321 Directory objects that are contained in the Directory. For each entry in
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322 `listing`, the `basename` property defines the name of the File or
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323 Subdirectory when staged to disk. If `listing` is not provided, the
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324 implementation must have some way of fetching the Directory listing at
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325 runtime based on the `location` field.
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326
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327 If a Directory does not have `location`, it is a Directory literal. A
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328 Directory literal must provide `listing`. Directory literals must be
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329 created on disk at runtime as needed.
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330
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331 The resources in a Directory literal do not need to have any implied
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332 relationship in their `location`. For example, a Directory listing may
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333 contain two files located on different hosts. It is the responsibility of
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334 the runtime to ensure that those files are staged to disk appropriately.
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335 Secondary files associated with files in `listing` must also be staged to
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336 the same Directory.
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337
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338 When executing a CommandLineTool, Directories must be recursively staged
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339 first and have local values of `path` assigend.
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340
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341 Directory objects in CommandLineTool output must provide either a
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342 `location` URI or a `path` property in the context of the tool execution
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343 runtime (local to the compute node, or within the executing container).
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344
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345 An ExpressionTool may forward file references from input to output by using
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346 the same value for `location`.
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347
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348 Name conflicts (the same `basename` appearing multiple times in `listing`
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349 or in any entry in `secondaryFiles` in the listing) is a fatal error.
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350
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351 fields:
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352 - name: class
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353 type:
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354 type: enum
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355 name: Directory_class
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356 symbols:
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357 - cwl:Directory
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358 jsonldPredicate:
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359 _id: "@type"
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360 _type: "@vocab"
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361 doc: Must be `Directory` to indicate this object describes a Directory.
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362 - name: location
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363 type: string?
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364 doc: |
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365 An IRI that identifies the directory resource. This may be a relative
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366 reference, in which case it must be resolved using the base IRI of the
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367 document. The location may refer to a local or remote resource. If
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368 the `listing` field is not set, the implementation must use the
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369 location IRI to retrieve directory listing. If an implementation is
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370 unable to retrieve the directory listing stored at a remote resource (due to
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371 unsupported protocol, access denied, or other issue) it must signal an
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parents:
diff changeset
372 error.
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parents:
diff changeset
373
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parents:
diff changeset
374 If the `location` field is not provided, the `listing` field must be
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shellac
parents:
diff changeset
375 provided. The implementation must assign a unique identifier for
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parents:
diff changeset
376 the `location` field.
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shellac
parents:
diff changeset
377
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parents:
diff changeset
378 If the `path` field is provided but the `location` field is not, an
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parents:
diff changeset
379 implementation may assign the value of the `path` field to `location`,
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shellac
parents:
diff changeset
380 then follow the rules above.
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diff changeset
381 jsonldPredicate:
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382 _id: "@id"
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parents:
diff changeset
383 _type: "@id"
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parents:
diff changeset
384 - name: path
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parents:
diff changeset
385 type: string?
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diff changeset
386 doc: |
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387 The local path where the Directory is made available prior to executing a
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parents:
diff changeset
388 CommandLineTool. This must be set by the implementation. This field
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parents:
diff changeset
389 must not be used in any other context. The command line tool being
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parents:
diff changeset
390 executed must be able to to access the directory at `path` using the POSIX
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shellac
parents:
diff changeset
391 `opendir(2)` syscall.
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diff changeset
392
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393 If the `path` contains [POSIX shell metacharacters](http://pubs.opengroup.org/onlinepubs/9699919799/utilities/V3_chap02.html#tag_18_02)
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parents:
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394 (`|`,`&`, `;`, `<`, `>`, `(`,`)`, `$`,`` ` ``, `\`, `"`, `'`,
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parents:
diff changeset
395 `<space>`, `<tab>`, and `<newline>`) or characters
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parents:
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396 [not allowed](http://www.iana.org/assignments/idna-tables-6.3.0/idna-tables-6.3.0.xhtml)
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parents:
diff changeset
397 for [Internationalized Domain Names for Applications](https://tools.ietf.org/html/rfc6452)
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shellac
parents:
diff changeset
398 then implementations may terminate the process with a
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parents:
diff changeset
399 `permanentFailure`.
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diff changeset
400 jsonldPredicate:
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parents:
diff changeset
401 _id: "cwl:path"
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parents:
diff changeset
402 _type: "@id"
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parents:
diff changeset
403 - name: basename
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parents:
diff changeset
404 type: string?
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parents:
diff changeset
405 doc: |
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diff changeset
406 The base name of the directory, that is, the name of the file without any
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parents:
diff changeset
407 leading directory path. The base name must not contain a slash `/`.
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parents:
diff changeset
408
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diff changeset
409 If not provided, the implementation must set this field based on the
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parents:
diff changeset
410 `location` field by taking the final path component after parsing
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parents:
diff changeset
411 `location` as an IRI. If `basename` is provided, it is not required to
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412 match the value from `location`.
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diff changeset
413
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414 When this file is made available to a CommandLineTool, it must be named
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parents:
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415 with `basename`, i.e. the final component of the `path` field must match
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diff changeset
416 `basename`.
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417 jsonldPredicate: "cwl:basename"
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418 - name: listing
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diff changeset
419 type:
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420 - "null"
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parents:
diff changeset
421 - type: array
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parents:
diff changeset
422 items: [File, Directory]
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423 doc: |
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diff changeset
424 List of files or subdirectories contained in this directory. The name
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parents:
diff changeset
425 of each file or subdirectory is determined by the `basename` field of
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426 each `File` or `Directory` object. It is an error if a `File` shares a
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427 `basename` with any other entry in `listing`. If two or more
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428 `Directory` object share the same `basename`, this must be treated as
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429 equivalent to a single subdirectory with the listings recursively
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diff changeset
430 merged.
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431 jsonldPredicate:
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432 _id: "cwl:listing"
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diff changeset
433
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parents:
diff changeset
434 - name: Labeled
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parents:
diff changeset
435 type: record
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parents:
diff changeset
436 abstract: true
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parents:
diff changeset
437 fields:
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parents:
diff changeset
438 - name: label
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parents:
diff changeset
439 type:
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parents:
diff changeset
440 - "null"
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parents:
diff changeset
441 - string
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parents:
diff changeset
442 jsonldPredicate: "rdfs:label"
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parents:
diff changeset
443 doc: "A short, human-readable label of this object."
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parents:
diff changeset
444
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shellac
parents:
diff changeset
445
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shellac
parents:
diff changeset
446 - name: Identified
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parents:
diff changeset
447 type: record
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parents:
diff changeset
448 abstract: true
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parents:
diff changeset
449 fields:
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parents:
diff changeset
450 - name: id
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shellac
parents:
diff changeset
451 type: string?
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parents:
diff changeset
452 jsonldPredicate: "@id"
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parents:
diff changeset
453 doc: "The unique identifier for this object."
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parents:
diff changeset
454
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shellac
parents:
diff changeset
455
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shellac
parents:
diff changeset
456 - name: LoadListingEnum
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parents:
diff changeset
457 type: enum
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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parents:
diff changeset
458 symbols: [no_listing, shallow_listing, deep_listing]
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shellac
parents:
diff changeset
459 doc:
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shellac
parents:
diff changeset
460 - |
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parents:
diff changeset
461 Specify the desired behavior for loading the `listing` field of
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
462 a Directory object for use by expressions.
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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parents:
diff changeset
463 - "no_listing: Do not load the directory listing."
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parents:
diff changeset
464 - "shallow_listing: Only load the top level listing, do not recurse into subdirectories."
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parents:
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465 - "deep_listing: Load the directory listing and recursively load all subdirectories as well."
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shellac
parents:
diff changeset
466
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shellac
parents:
diff changeset
467
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shellac
parents:
diff changeset
468 - name: LoadContents
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shellac
parents:
diff changeset
469 type: record
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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parents:
diff changeset
470 abstract: true
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parents:
diff changeset
471 fields:
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parents:
diff changeset
472 - name: loadContents
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parents:
diff changeset
473 type: boolean?
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parents:
diff changeset
474 jsonldPredicate: "cwl:loadContents"
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parents:
diff changeset
475 doc: |
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parents:
diff changeset
476 Only valid when `type: File` or is an array of `items: File`.
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parents:
diff changeset
477
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478 If true, the file (or each file in the array) must be a UTF-8
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parents:
diff changeset
479 text file 64 KiB or smaller, and the implementation must read
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parents:
diff changeset
480 the entire contents of the file (or file array) and place it
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shellac
parents:
diff changeset
481 in the `contents` field of the File object for use by
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
482 expressions. If the size of the file is greater than 64 KiB,
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shellac
parents:
diff changeset
483 the implementation must raise a fatal error.
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parents:
diff changeset
484
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shellac
parents:
diff changeset
485 - name: loadListing
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shellac
parents:
diff changeset
486 type: LoadListingEnum?
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parents:
diff changeset
487 jsonldPredicate: "cwl:loadListing"
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parents:
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488 doc: |
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parents:
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489 Only valid when `type: Directory` or is an array of `items: Directory`.
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parents:
diff changeset
490
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parents:
diff changeset
491 Specify the desired behavior for loading the `listing` field of
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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parents:
diff changeset
492 a Directory object for use by expressions.
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parents:
diff changeset
493
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parents:
diff changeset
494 The order of precedence for loadListing is:
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parents:
diff changeset
495
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parents:
diff changeset
496 1. `loadListing` on an individual parameter
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parents:
diff changeset
497 2. Inherited from `LoadListingRequirement`
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parents:
diff changeset
498 3. By default: `no_listing`
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parents:
diff changeset
499
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parents:
diff changeset
500 - name: FieldBase
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parents:
diff changeset
501 type: record
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parents:
diff changeset
502 extends: Labeled
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parents:
diff changeset
503 abstract: true
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parents:
diff changeset
504 fields:
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parents:
diff changeset
505 secondaryFiles:
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parents:
diff changeset
506 type:
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parents:
diff changeset
507 - "null"
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parents:
diff changeset
508 - SecondaryFileSchema
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parents:
diff changeset
509 - type: array
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parents:
diff changeset
510 items: SecondaryFileSchema
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parents:
diff changeset
511 jsonldPredicate:
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parents:
diff changeset
512 _id: "cwl:secondaryFiles"
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parents:
diff changeset
513 secondaryFilesDSL: true
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parents:
diff changeset
514 doc: |
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parents:
diff changeset
515 Only valid when `type: File` or is an array of `items: File`.
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parents:
diff changeset
516
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parents:
diff changeset
517 Provides a pattern or expression specifying files or
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parents:
diff changeset
518 directories that should be included alongside the primary
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parents:
diff changeset
519 file. Secondary files may be required or optional. When not
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parents:
diff changeset
520 explicitly specified, secondary files specified for `inputs`
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parents:
diff changeset
521 are required and `outputs` are optional. An implementation
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parents:
diff changeset
522 must include matching Files and Directories in the
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parents:
diff changeset
523 `secondaryFiles` property of the primary file. These Files
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parents:
diff changeset
524 and Directories must be transferred and staged alongside the
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parents:
diff changeset
525 primary file. An implementation may fail workflow execution
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parents:
diff changeset
526 if a required secondary file does not exist.
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parents:
diff changeset
527
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parents:
diff changeset
528 If the value is an expression, the value of `self` in the expression
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parents:
diff changeset
529 must be the primary input or output File object to which this binding
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parents:
diff changeset
530 applies. The `basename`, `nameroot` and `nameext` fields must be
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parents:
diff changeset
531 present in `self`. For `CommandLineTool` outputs the `path` field must
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parents:
diff changeset
532 also be present. The expression must return a filename string relative
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parents:
diff changeset
533 to the path to the primary File, a File or Directory object with either
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parents:
diff changeset
534 `path` or `location` and `basename` fields set, or an array consisting
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parents:
diff changeset
535 of strings or File or Directory objects. It is legal to reference an
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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parents:
diff changeset
536 unchanged File or Directory object taken from input as a secondaryFile.
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parents:
diff changeset
537 The expression may return "null" in which case there is no secondaryFile
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parents:
diff changeset
538 from that expression.
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parents:
diff changeset
539
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parents:
diff changeset
540 To work on non-filename-preserving storage systems, portable tool
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parents:
diff changeset
541 descriptions should avoid constructing new values from `location`, but
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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parents:
diff changeset
542 should construct relative references using `basename` or `nameroot`
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parents:
diff changeset
543 instead.
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parents:
diff changeset
544
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parents:
diff changeset
545 If a value in `secondaryFiles` is a string that is not an expression,
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parents:
diff changeset
546 it specifies that the following pattern should be applied to the path
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parents:
diff changeset
547 of the primary file to yield a filename relative to the primary File:
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parents:
diff changeset
548
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parents:
diff changeset
549 1. If string ends with `?` character, remove the last `?` and mark
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parents:
diff changeset
550 the resulting secondary file as optional.
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parents:
diff changeset
551 2. If string begins with one or more caret `^` characters, for each
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shellac
parents:
diff changeset
552 caret, remove the last file extension from the path (the last
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
553 period `.` and all following characters). If there are no file
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parents:
diff changeset
554 extensions, the path is unchanged.
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parents:
diff changeset
555 3. Append the remainder of the string to the end of the file path.
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parents:
diff changeset
556
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parents:
diff changeset
557 streamable:
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parents:
diff changeset
558 type: boolean?
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parents:
diff changeset
559 doc: |
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parents:
diff changeset
560 Only valid when `type: File` or is an array of `items: File`.
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parents:
diff changeset
561
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parents:
diff changeset
562 A value of `true` indicates that the file is read or written
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parents:
diff changeset
563 sequentially without seeking. An implementation may use this flag to
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
564 indicate whether it is valid to stream file contents using a named
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parents:
diff changeset
565 pipe. Default: `false`.
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parents:
diff changeset
566
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parents:
diff changeset
567
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parents:
diff changeset
568 - name: InputFormat
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parents:
diff changeset
569 type: record
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parents:
diff changeset
570 abstract: true
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parents:
diff changeset
571 fields:
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parents:
diff changeset
572 format:
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parents:
diff changeset
573 type:
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parents:
diff changeset
574 - "null"
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parents:
diff changeset
575 - string
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parents:
diff changeset
576 - type: array
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parents:
diff changeset
577 items: string
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parents:
diff changeset
578 - Expression
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parents:
diff changeset
579 jsonldPredicate:
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parents:
diff changeset
580 _id: cwl:format
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parents:
diff changeset
581 _type: "@id"
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parents:
diff changeset
582 identity: true
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parents:
diff changeset
583 doc: |
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parents:
diff changeset
584 Only valid when `type: File` or is an array of `items: File`.
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parents:
diff changeset
585
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parents:
diff changeset
586 This must be one or more IRIs of concept nodes
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parents:
diff changeset
587 that represents file formats which are allowed as input to this
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parents:
diff changeset
588 parameter, preferrably defined within an ontology. If no ontology is
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parents:
diff changeset
589 available, file formats may be tested by exact match.
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parents:
diff changeset
590
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parents:
diff changeset
591
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parents:
diff changeset
592 - name: OutputFormat
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parents:
diff changeset
593 type: record
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parents:
diff changeset
594 abstract: true
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parents:
diff changeset
595 fields:
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parents:
diff changeset
596 format:
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parents:
diff changeset
597 type:
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parents:
diff changeset
598 - "null"
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parents:
diff changeset
599 - string
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parents:
diff changeset
600 - Expression
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parents:
diff changeset
601 jsonldPredicate:
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parents:
diff changeset
602 _id: cwl:format
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parents:
diff changeset
603 _type: "@id"
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parents:
diff changeset
604 identity: true
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parents:
diff changeset
605 doc: |
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parents:
diff changeset
606 Only valid when `type: File` or is an array of `items: File`.
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shellac
parents:
diff changeset
607
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shellac
parents:
diff changeset
608 This is the file format that will be assigned to the output
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shellac
parents:
diff changeset
609 File object.
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shellac
parents:
diff changeset
610
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shellac
parents:
diff changeset
611
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shellac
parents:
diff changeset
612 - name: Parameter
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parents:
diff changeset
613 type: record
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parents:
diff changeset
614 extends: [FieldBase, sld:Documented, Identified]
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parents:
diff changeset
615 abstract: true
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parents:
diff changeset
616 doc: |
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parents:
diff changeset
617 Define an input or output parameter to a process.
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parents:
diff changeset
618
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parents:
diff changeset
619
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parents:
diff changeset
620 - type: enum
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parents:
diff changeset
621 name: Expression
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parents:
diff changeset
622 doc: |
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parents:
diff changeset
623 'Expression' is not a real type. It indicates that a field must allow
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parents:
diff changeset
624 runtime parameter references. If [InlineJavascriptRequirement](#InlineJavascriptRequirement)
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parents:
diff changeset
625 is declared and supported by the platform, the field must also allow
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parents:
diff changeset
626 Javascript expressions.
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627 symbols:
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628 - cwl:ExpressionPlaceholder
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parents:
diff changeset
629
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diff changeset
630
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parents:
diff changeset
631 - name: InputBinding
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diff changeset
632 type: record
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diff changeset
633 fields:
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634 - name: loadContents
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diff changeset
635 type:
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636 - "null"
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637 - boolean
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diff changeset
638 jsonldPredicate: "cwl:loadContents"
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diff changeset
639 doc: |
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640 Use of `loadContents` in `InputBinding` is deprecated.
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diff changeset
641 Preserved for v1.0 backwards compatability. Will be removed in
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diff changeset
642 CWL v2.0. Use `InputParameter.loadContents` instead.
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diff changeset
643
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644 - name: IOSchema
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diff changeset
645 extends: [Labeled, sld:Documented]
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646 type: record
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diff changeset
647 abstract: true
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648 fields:
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diff changeset
649 - name: name
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diff changeset
650 type: string?
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diff changeset
651 jsonldPredicate: "@id"
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diff changeset
652 doc: "The identifier for this type"
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diff changeset
653
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654 - name: InputSchema
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655 extends: [IOSchema]
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656 type: record
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diff changeset
657 abstract: true
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diff changeset
658
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659 - name: OutputSchema
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660 extends: [IOSchema]
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661 type: record
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662 abstract: true
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663
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664
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665 - name: InputRecordField
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666 type: record
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667 extends: [sld:RecordField, FieldBase, InputFormat, LoadContents]
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668 specialize:
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669 - specializeFrom: "sld:RecordSchema"
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670 specializeTo: InputRecordSchema
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671 - specializeFrom: "sld:EnumSchema"
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672 specializeTo: InputEnumSchema
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673 - specializeFrom: "sld:ArraySchema"
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674 specializeTo: InputArraySchema
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675 - specializeFrom: "sld:PrimitiveType"
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diff changeset
676 specializeTo: CWLType
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677
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678
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679 - name: InputRecordSchema
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680 type: record
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681 extends: ["sld:RecordSchema", InputSchema]
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682 specialize:
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683 - specializeFrom: "sld:RecordField"
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684 specializeTo: InputRecordField
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685
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686
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687 - name: InputEnumSchema
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688 type: record
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689 extends: ["sld:EnumSchema", InputSchema]
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690
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691
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parents:
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692 - name: InputArraySchema
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693 type: record
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diff changeset
694 extends: ["sld:ArraySchema", InputSchema]
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695 specialize:
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696 - specializeFrom: "sld:RecordSchema"
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diff changeset
697 specializeTo: InputRecordSchema
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parents:
diff changeset
698 - specializeFrom: "sld:EnumSchema"
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diff changeset
699 specializeTo: InputEnumSchema
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parents:
diff changeset
700 - specializeFrom: "sld:ArraySchema"
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parents:
diff changeset
701 specializeTo: InputArraySchema
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parents:
diff changeset
702 - specializeFrom: "sld:PrimitiveType"
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parents:
diff changeset
703 specializeTo: CWLType
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parents:
diff changeset
704
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parents:
diff changeset
705
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parents:
diff changeset
706 - name: OutputRecordField
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parents:
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707 type: record
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diff changeset
708 extends: [sld:RecordField, FieldBase, OutputFormat]
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709 specialize:
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diff changeset
710 - specializeFrom: "sld:RecordSchema"
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parents:
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711 specializeTo: OutputRecordSchema
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diff changeset
712 - specializeFrom: "sld:EnumSchema"
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parents:
diff changeset
713 specializeTo: OutputEnumSchema
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parents:
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714 - specializeFrom: "sld:ArraySchema"
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parents:
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715 specializeTo: OutputArraySchema
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parents:
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716 - specializeFrom: "sld:PrimitiveType"
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parents:
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717 specializeTo: CWLType
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parents:
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718
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719
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720 - name: OutputRecordSchema
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721 type: record
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722 extends: ["sld:RecordSchema", "#OutputSchema"]
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723 docParent: "#OutputParameter"
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724 specialize:
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725 - specializeFrom: "sld:RecordField"
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726 specializeTo: OutputRecordField
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727
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728
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729 - name: OutputEnumSchema
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730 type: record
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731 extends: ["sld:EnumSchema", OutputSchema]
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732 docParent: "#OutputParameter"
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733
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734
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735 - name: OutputArraySchema
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736 type: record
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737 extends: ["sld:ArraySchema", OutputSchema]
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738 docParent: "#OutputParameter"
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739 specialize:
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740 - specializeFrom: "sld:RecordSchema"
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741 specializeTo: OutputRecordSchema
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742 - specializeFrom: "sld:EnumSchema"
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743 specializeTo: OutputEnumSchema
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744 - specializeFrom: "sld:ArraySchema"
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745 specializeTo: OutputArraySchema
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746 - specializeFrom: "sld:PrimitiveType"
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747 specializeTo: CWLType
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parents:
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748
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749
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750 - name: InputParameter
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parents:
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751 type: record
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752 abstract: true
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753 extends: [Parameter, InputFormat, LoadContents]
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754 fields:
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755 - name: default
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756 type: Any?
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757 jsonldPredicate:
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758 _id: sld:default
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759 noLinkCheck: true
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760 doc: |
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761 The default value to use for this parameter if the parameter is missing
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762 from the input object, or if the value of the parameter in the input
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763 object is `null`. Default values are applied before evaluating expressions
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764 (e.g. dependent `valueFrom` fields).
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765
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766
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767 - name: OutputParameter
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768 type: record
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769 extends: [Parameter, OutputFormat]
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770 abstract: true
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771
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772
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773 - type: record
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774 name: ProcessRequirement
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775 abstract: true
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776 doc: |
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777 A process requirement declares a prerequisite that may or must be fulfilled
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778 before executing a process. See [`Process.hints`](#process) and
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779 [`Process.requirements`](#process).
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780
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781 Process requirements are the primary mechanism for specifying extensions to
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782 the CWL core specification.
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783
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784
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785 - type: record
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786 name: Process
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787 extends: [Identified, Labeled, sld:Documented]
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788 abstract: true
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789 doc: |
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790
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791 The base executable type in CWL is the `Process` object defined by the
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parents:
diff changeset
792 document. Note that the `Process` object is abstract and cannot be
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parents:
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793 directly executed.
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794
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diff changeset
795 fields:
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796 - name: inputs
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797 type:
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diff changeset
798 type: array
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799 items: InputParameter
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800 jsonldPredicate:
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801 _id: "cwl:inputs"
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802 mapSubject: id
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803 mapPredicate: type
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804 doc: |
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805 Defines the input parameters of the process. The process is ready to
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diff changeset
806 run when all required input parameters are associated with concrete
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diff changeset
807 values. Input parameters include a schema for each parameter which is
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parents:
diff changeset
808 used to validate the input object. It may also be used to build a user
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809 interface for constructing the input object.
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810
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811 When accepting an input object, all input parameters must have a value.
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812 If an input parameter is missing from the input object, it must be
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813 assigned a value of `null` (or the value of `default` for that
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814 parameter, if provided) for the purposes of validation and evaluation
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815 of expressions.
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816
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817 - name: outputs
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818 type:
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819 type: array
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820 items: OutputParameter
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821 jsonldPredicate:
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822 _id: "cwl:outputs"
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823 mapSubject: id
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824 mapPredicate: type
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825 doc: |
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826 Defines the parameters representing the output of the process. May be
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827 used to generate and/or validate the output object.
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828 - name: requirements
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829 type: ProcessRequirement[]?
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830 jsonldPredicate:
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831 _id: "cwl:requirements"
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832 mapSubject: class
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833 doc: |
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834 Declares requirements that apply to either the runtime environment or the
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diff changeset
835 workflow engine that must be met in order to execute this process. If
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836 an implementation cannot satisfy all requirements, or a requirement is
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837 listed which is not recognized by the implementation, it is a fatal
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838 error and the implementation must not attempt to run the process,
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839 unless overridden at user option.
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840 - name: hints
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841 type: Any[]?
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842 doc: |
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843 Declares hints applying to either the runtime environment or the
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diff changeset
844 workflow engine that may be helpful in executing this process. It is
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845 not an error if an implementation cannot satisfy all hints, however
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846 the implementation may report a warning.
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847 jsonldPredicate:
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diff changeset
848 _id: cwl:hints
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diff changeset
849 noLinkCheck: true
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850 mapSubject: class
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851 - name: cwlVersion
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852 type: CWLVersion?
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853 doc: |
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854 CWL document version. Always required at the document root. Not
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855 required for a Process embedded inside another Process.
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856 jsonldPredicate:
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857 "_id": "cwl:cwlVersion"
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858 "_type": "@vocab"
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859 - name: intent
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860 type: string[]?
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861 jsonldPredicate:
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862 _type: "@id"
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863 identity: true
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864 doc: |
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865 An identifier for the type of computational operation, of this Process.
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866 Especially useful for "class: Operation", but can also be used for
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867 CommandLineTool, Workflow, or ExpressionTool.
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868
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869 If provided, then this must be an IRI of a concept node that
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870 represents the type of operation, preferrably defined within an ontology.
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871
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872 For example, in the domain of bioinformatics, one can use an IRI from
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873 the EDAM Ontology's [Operation concept nodes](http://edamontology.org/operation_0004),
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874 like [Alignment](http://edamontology.org/operation_2928),
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875 or [Clustering](http://edamontology.org/operation_3432); or a more
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876 specific Operation concept like
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877 [Split read mapping](http://edamontology.org/operation_3199).
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878
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879 - name: InlineJavascriptRequirement
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880 type: record
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881 extends: ProcessRequirement
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882 doc: |
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883 Indicates that the workflow platform must support inline Javascript expressions.
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884 If this requirement is not present, the workflow platform must not perform expression
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885 interpolatation.
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diff changeset
886 fields:
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parents:
diff changeset
887 - name: class
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parents:
diff changeset
888 type: string
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parents:
diff changeset
889 doc: "Always 'InlineJavascriptRequirement'"
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parents:
diff changeset
890 jsonldPredicate:
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parents:
diff changeset
891 "_id": "@type"
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parents:
diff changeset
892 "_type": "@vocab"
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parents:
diff changeset
893 - name: expressionLib
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parents:
diff changeset
894 type: string[]?
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parents:
diff changeset
895 doc: |
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parents:
diff changeset
896 Additional code fragments that will also be inserted
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parents:
diff changeset
897 before executing the expression code. Allows for function definitions that may
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parents:
diff changeset
898 be called from CWL expressions.
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parents:
diff changeset
899
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parents:
diff changeset
900
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parents:
diff changeset
901 - name: CommandInputSchema
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parents:
diff changeset
902 type: record
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parents:
diff changeset
903 abstract: true
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parents:
diff changeset
904
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parents:
diff changeset
905 - name: SchemaDefRequirement
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parents:
diff changeset
906 type: record
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parents:
diff changeset
907 extends: ProcessRequirement
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parents:
diff changeset
908 doc: |
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parents:
diff changeset
909 This field consists of an array of type definitions which must be used when
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
910 interpreting the `inputs` and `outputs` fields. When a `type` field
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shellac
parents:
diff changeset
911 contain a IRI, the implementation must check if the type is defined in
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shellac
parents:
diff changeset
912 `schemaDefs` and use that definition. If the type is not found in
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shellac
parents:
diff changeset
913 `schemaDefs`, it is an error. The entries in `schemaDefs` must be
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shellac
parents:
diff changeset
914 processed in the order listed such that later schema definitions may refer
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shellac
parents:
diff changeset
915 to earlier schema definitions.
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shellac
parents:
diff changeset
916
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parents:
diff changeset
917 - **Type definitions are allowed for `enum` and `record` types only.**
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shellac
parents:
diff changeset
918 - Type definitions may be shared by defining them in a file and then
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shellac
parents:
diff changeset
919 `$include`-ing them in the `types` field.
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shellac
parents:
diff changeset
920 - A file can contain a list of type definitions
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parents:
diff changeset
921
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parents:
diff changeset
922 fields:
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parents:
diff changeset
923 - name: class
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parents:
diff changeset
924 type: string
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parents:
diff changeset
925 doc: "Always 'SchemaDefRequirement'"
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parents:
diff changeset
926 jsonldPredicate:
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parents:
diff changeset
927 "_id": "@type"
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parents:
diff changeset
928 "_type": "@vocab"
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parents:
diff changeset
929 - name: types
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parents:
diff changeset
930 type:
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parents:
diff changeset
931 type: array
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parents:
diff changeset
932 items: CommandInputSchema
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parents:
diff changeset
933 doc: The list of type definitions.
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shellac
parents:
diff changeset
934
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parents:
diff changeset
935 - name: SecondaryFileSchema
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parents:
diff changeset
936 type: record
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diff changeset
937 fields:
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parents:
diff changeset
938 - name: pattern
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parents:
diff changeset
939 type:
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parents:
diff changeset
940 - string
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parents:
diff changeset
941 - Expression
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parents:
diff changeset
942 doc: |
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parents:
diff changeset
943 Provides a pattern or expression specifying files or directories that
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
944 should be included alongside the primary file.
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shellac
parents:
diff changeset
945
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parents:
diff changeset
946 If the value is an expression, the value of `self` in the
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
947 expression must be the primary input or output File object to
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
948 which this binding applies. The `basename`, `nameroot` and
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shellac
parents:
diff changeset
949 `nameext` fields must be present in `self`. For
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
950 `CommandLineTool` inputs the `location` field must also be
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
951 present. For `CommandLineTool` outputs the `path` field must
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
952 also be present. If secondary files were included on an input
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shellac
parents:
diff changeset
953 File object as part of the Process invocation, they must also
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
954 be present in `secondaryFiles` on `self`.
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shellac
parents:
diff changeset
955
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shellac
parents:
diff changeset
956 The expression must return either: a filename string relative
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
957 to the path to the primary File, a File or Directory object
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
958 (`class: File` or 'class: Directory`) with either `location`
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
959 (for inputs) or `path` (for outputs) and `basename` fields
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shellac
parents:
diff changeset
960 set, or an array consisting of strings or File or Directory
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
961 objects as previously described.
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parents:
diff changeset
962
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shellac
parents:
diff changeset
963 It is legal to use `location` from a File or Directory object
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shellac
parents:
diff changeset
964 passed in as input, including `location` from secondary files
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shellac
parents:
diff changeset
965 on `self`. If an expression returns a File object with the
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
966 same `location` but a different `basename` as a secondary file
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shellac
parents:
diff changeset
967 that was passed in, the expression result takes precedence.
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
968 Setting the basename with an expression this way affects the
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
969 `path` where the secondary file will be staged to in the
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shellac
parents:
diff changeset
970 CommandLineTool.
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shellac
parents:
diff changeset
971
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parents:
diff changeset
972 The expression may return "null" in which case there is no
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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parents:
diff changeset
973 secondary file from that expression.
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parents:
diff changeset
974
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shellac
parents:
diff changeset
975 To work on non-filename-preserving storage systems, portable
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
976 tool descriptions should treat `location` as an opaque
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
977 identifier and avoid constructing new values from `location`,
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shellac
parents:
diff changeset
978 but should construct relative references using `basename` or
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
979 `nameroot` instead, or propagate `location` from defined inputs.
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shellac
parents:
diff changeset
980
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shellac
parents:
diff changeset
981 If a value in `secondaryFiles` is a string that is not an expression,
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shellac
parents:
diff changeset
982 it specifies that the following pattern should be applied to the path
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
983 of the primary file to yield a filename relative to the primary File:
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shellac
parents:
diff changeset
984
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parents:
diff changeset
985 1. If string ends with `?` character, remove the last `?` and mark
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parents:
diff changeset
986 the resulting secondary file as optional.
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parents:
diff changeset
987 2. If string begins with one or more caret `^` characters, for each
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
988 caret, remove the last file extension from the path (the last
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
989 period `.` and all following characters). If there are no file
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shellac
parents:
diff changeset
990 extensions, the path is unchanged.
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parents:
diff changeset
991 3. Append the remainder of the string to the end of the file path.
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shellac
parents:
diff changeset
992 - name: required
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parents:
diff changeset
993 type: ["null", boolean, Expression]
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parents:
diff changeset
994 doc: |
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parents:
diff changeset
995 An implementation must not fail workflow execution if `required` is
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parents:
diff changeset
996 set to `false` and the expected secondary file does not exist.
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shellac
parents:
diff changeset
997 Default value for `required` field is `true` for secondary files on
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parents:
diff changeset
998 input and `false` for secondary files on output.
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parents:
diff changeset
999 doc: |
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parents:
diff changeset
1000 Secondary files are specified using the following micro-DSL for secondary files:
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parents:
diff changeset
1001
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parents:
diff changeset
1002 * If the value is a string, it is transformed to an object with two fields
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parents:
diff changeset
1003 `pattern` and `required`
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parents:
diff changeset
1004 * By default, the value of `required` is `null`
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shellac
parents:
diff changeset
1005 (this indicates default behavior, which may be based on the context)
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parents:
diff changeset
1006 * If the value ends with a question mark `?` the question mark is
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
diff changeset
1007 stripped off and the value of the field `required` is set to `False`
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shellac
parents:
diff changeset
1008 * The remaining value is assigned to the field `pattern`
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parents:
diff changeset
1009
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shellac
parents:
diff changeset
1010 For implementation details and examples, please see
4f3585e2f14b "planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
shellac
parents:
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1011 [this section](SchemaSalad.html#Domain_Specific_Language_for_secondary_files)
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1012 in the Schema Salad specification.
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1013
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1014 - name: LoadListingRequirement
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1015 type: record
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1016 extends: ProcessRequirement
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1017 doc: |
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1018 Specify the desired behavior for loading the `listing` field of
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1019 a Directory object for use by expressions.
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1020 fields:
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1021 class:
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1022 type: string
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1023 doc: "Always 'LoadListingRequirement'"
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1024 jsonldPredicate:
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1025 "_id": "@type"
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1026 "_type": "@vocab"
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1027 loadListing:
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1028 type: LoadListingEnum?
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1029 jsonldPredicate: "cwl:loadListing"