Mercurial > repos > shellac > sam_consensus_v3
annotate env/lib/python3.9/site-packages/cwltool/tests/test_relocate.py @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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1 import json |
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2 import sys |
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3 from pathlib import Path |
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4 |
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5 from cwltool.main import main |
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6 |
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7 from .util import get_data, needs_docker |
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8 |
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9 if sys.version_info[0] < 3: |
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10 from StringIO import StringIO |
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11 else: |
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12 from io import StringIO |
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13 |
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14 |
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15 @needs_docker |
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16 def test_for_910() -> None: |
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17 assert main([get_data("tests/wf/910.cwl")]) == 0 |
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18 assert main([get_data("tests/wf/910.cwl")]) == 0 |
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19 |
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20 |
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21 @needs_docker |
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22 def test_for_conflict_file_names(tmp_path: Path) -> None: |
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23 stream = StringIO() |
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24 |
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25 assert ( |
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26 main( |
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27 ["--debug", "--outdir", str(tmp_path), get_data("tests/wf/conflict.cwl")], |
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28 stdout=stream, |
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29 ) |
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30 == 0 |
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31 ) |
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32 |
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33 out = json.loads(stream.getvalue()) |
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34 assert out["b1"]["basename"] == out["b2"]["basename"] |
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35 assert out["b1"]["location"] != out["b2"]["location"] |