annotate env/lib/python3.9/site-packages/cwltool/tests/wf/scatter2.cwl @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 #!/usr/bin/env cwl-runner
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2 # Copyright (C) The Arvados Authors. All rights reserved.
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3 #
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4 # SPDX-License-Identifier: Apache-2.0
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5
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6 class: Workflow
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7 cwlVersion: v1.0
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8 $namespaces:
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9 arv: "http://arvados.org/cwl#"
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10 inputs:
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11 sleeptime:
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12 type: int[]
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13 default: [5]
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14 fileblub:
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15 type: File
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16 default:
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17 class: File
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18 location: keep:99999999999999999999999999999999+118/token.txt
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19 outputs:
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20 out:
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21 type: string[]
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22 outputSource: scatterstep/out
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23 requirements:
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24 SubworkflowFeatureRequirement: {}
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25 ScatterFeatureRequirement: {}
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26 InlineJavascriptRequirement: {}
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27 StepInputExpressionRequirement: {}
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28 steps:
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29 scatterstep:
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30 in:
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31 sleeptime: sleeptime
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32 fileblub: fileblub
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33 out: [out]
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34 scatter: sleeptime
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35 hints:
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36 - class: arv:RunInSingleContainer
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37 run:
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38 class: Workflow
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39 id: mysub
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40 inputs:
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41 sleeptime: int
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42 fileblub: File
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43 outputs:
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44 out:
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45 type: string
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46 outputSource: sleep1/out
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47 steps:
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48 sleep1:
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49 in:
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50 sleeptime: sleeptime
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51 blurb:
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52 valueFrom: |
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53 ${
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54 return String(inputs.sleeptime) + "b";
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55 }
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56 out: [out]
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57 run:
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58 class: CommandLineTool
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59 id: subtool
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60 inputs:
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61 sleeptime:
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62 type: int
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63 inputBinding: {position: 1}
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64 outputs:
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65 out:
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66 type: string
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67 outputBinding:
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68 outputEval: "out"
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69 baseCommand: sleep