annotate env/lib/python3.9/site-packages/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 import pytest
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2
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3 np = pytest.importorskip("numpy")
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4 scipy = pytest.importorskip("scipy")
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5
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6 import networkx as nx
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7 from networkx.testing import almost_equal
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8
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9 from networkx import edge_current_flow_betweenness_centrality as edge_current_flow
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10
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11 from networkx import (
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12 edge_current_flow_betweenness_centrality_subset as edge_current_flow_subset,
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13 )
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14
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15
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16 class TestFlowBetweennessCentrality:
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17 def test_K4_normalized(self):
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18 """Betweenness centrality: K4"""
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19 G = nx.complete_graph(4)
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20 b = nx.current_flow_betweenness_centrality_subset(
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21 G, list(G), list(G), normalized=True
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22 )
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23 b_answer = nx.current_flow_betweenness_centrality(G, normalized=True)
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24 for n in sorted(G):
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25 assert almost_equal(b[n], b_answer[n])
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26
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27 def test_K4(self):
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28 """Betweenness centrality: K4"""
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29 G = nx.complete_graph(4)
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30 b = nx.current_flow_betweenness_centrality_subset(
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31 G, list(G), list(G), normalized=True
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32 )
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33 b_answer = nx.current_flow_betweenness_centrality(G, normalized=True)
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34 for n in sorted(G):
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35 assert almost_equal(b[n], b_answer[n])
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36 # test weighted network
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37 G.add_edge(0, 1, weight=0.5, other=0.3)
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38 b = nx.current_flow_betweenness_centrality_subset(
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39 G, list(G), list(G), normalized=True, weight=None
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40 )
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41 for n in sorted(G):
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42 assert almost_equal(b[n], b_answer[n])
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43 b = nx.current_flow_betweenness_centrality_subset(
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44 G, list(G), list(G), normalized=True
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45 )
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46 b_answer = nx.current_flow_betweenness_centrality(G, normalized=True)
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47 for n in sorted(G):
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48 assert almost_equal(b[n], b_answer[n])
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49 b = nx.current_flow_betweenness_centrality_subset(
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50 G, list(G), list(G), normalized=True, weight="other"
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51 )
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52 b_answer = nx.current_flow_betweenness_centrality(
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53 G, normalized=True, weight="other"
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54 )
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55 for n in sorted(G):
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56 assert almost_equal(b[n], b_answer[n])
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57
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58 def test_P4_normalized(self):
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59 """Betweenness centrality: P4 normalized"""
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60 G = nx.path_graph(4)
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61 b = nx.current_flow_betweenness_centrality_subset(
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62 G, list(G), list(G), normalized=True
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63 )
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64 b_answer = nx.current_flow_betweenness_centrality(G, normalized=True)
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65 for n in sorted(G):
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66 assert almost_equal(b[n], b_answer[n])
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67
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68 def test_P4(self):
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69 """Betweenness centrality: P4"""
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70 G = nx.path_graph(4)
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71 b = nx.current_flow_betweenness_centrality_subset(
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72 G, list(G), list(G), normalized=True
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73 )
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74 b_answer = nx.current_flow_betweenness_centrality(G, normalized=True)
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75 for n in sorted(G):
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76 assert almost_equal(b[n], b_answer[n])
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77
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78 def test_star(self):
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79 """Betweenness centrality: star """
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80 G = nx.Graph()
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81 nx.add_star(G, ["a", "b", "c", "d"])
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82 b = nx.current_flow_betweenness_centrality_subset(
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83 G, list(G), list(G), normalized=True
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84 )
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85 b_answer = nx.current_flow_betweenness_centrality(G, normalized=True)
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86 for n in sorted(G):
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87 assert almost_equal(b[n], b_answer[n])
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88
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89
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90 # class TestWeightedFlowBetweennessCentrality():
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91 # pass
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92
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93
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94 class TestEdgeFlowBetweennessCentrality:
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95 def test_K4_normalized(self):
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96 """Betweenness centrality: K4"""
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97 G = nx.complete_graph(4)
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98 b = edge_current_flow_subset(G, list(G), list(G), normalized=True)
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99 b_answer = edge_current_flow(G, normalized=True)
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100 for (s, t), v1 in b_answer.items():
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101 v2 = b.get((s, t), b.get((t, s)))
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102 assert almost_equal(v1, v2)
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103
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104 def test_K4(self):
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105 """Betweenness centrality: K4"""
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106 G = nx.complete_graph(4)
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107 b = edge_current_flow_subset(G, list(G), list(G), normalized=False)
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108 b_answer = edge_current_flow(G, normalized=False)
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109 for (s, t), v1 in b_answer.items():
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110 v2 = b.get((s, t), b.get((t, s)))
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111 assert almost_equal(v1, v2)
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112 # test weighted network
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113 G.add_edge(0, 1, weight=0.5, other=0.3)
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114 b = edge_current_flow_subset(G, list(G), list(G), normalized=False, weight=None)
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115 # weight is None => same as unweighted network
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116 for (s, t), v1 in b_answer.items():
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117 v2 = b.get((s, t), b.get((t, s)))
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118 assert almost_equal(v1, v2)
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119
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120 b = edge_current_flow_subset(G, list(G), list(G), normalized=False)
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121 b_answer = edge_current_flow(G, normalized=False)
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122 for (s, t), v1 in b_answer.items():
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123 v2 = b.get((s, t), b.get((t, s)))
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124 assert almost_equal(v1, v2)
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125
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126 b = edge_current_flow_subset(
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127 G, list(G), list(G), normalized=False, weight="other"
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128 )
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129 b_answer = edge_current_flow(G, normalized=False, weight="other")
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130 for (s, t), v1 in b_answer.items():
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131 v2 = b.get((s, t), b.get((t, s)))
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132 assert almost_equal(v1, v2)
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133
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134 def test_C4(self):
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135 """Edge betweenness centrality: C4"""
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136 G = nx.cycle_graph(4)
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137 b = edge_current_flow_subset(G, list(G), list(G), normalized=True)
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138 b_answer = edge_current_flow(G, normalized=True)
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139 for (s, t), v1 in b_answer.items():
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140 v2 = b.get((s, t), b.get((t, s)))
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141 assert almost_equal(v1, v2)
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142
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143 def test_P4(self):
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144 """Edge betweenness centrality: P4"""
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145 G = nx.path_graph(4)
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146 b = edge_current_flow_subset(G, list(G), list(G), normalized=True)
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147 b_answer = edge_current_flow(G, normalized=True)
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148 for (s, t), v1 in b_answer.items():
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149 v2 = b.get((s, t), b.get((t, s)))
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150 assert almost_equal(v1, v2)