annotate env/lib/python3.9/site-packages/networkx/algorithms/community/tests/test_asyn_fluid.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"

import pytest
from networkx import Graph, NetworkXError
from networkx.algorithms.community.asyn_fluid import asyn_fluidc


def test_exceptions():
    test = Graph()
    test.add_node("a")
    pytest.raises(NetworkXError, asyn_fluidc, test, "hi")
    pytest.raises(NetworkXError, asyn_fluidc, test, -1)
    pytest.raises(NetworkXError, asyn_fluidc, test, 3)
    test.add_node("b")
    pytest.raises(NetworkXError, asyn_fluidc, test, 1)


def test_single_node():
    test = Graph()

    test.add_node("a")

    # ground truth
    ground_truth = {frozenset(["a"])}

    communities = asyn_fluidc(test, 1)
    result = {frozenset(c) for c in communities}
    assert result == ground_truth


def test_two_nodes():
    test = Graph()

    test.add_edge("a", "b")

    # ground truth
    ground_truth = {frozenset(["a"]), frozenset(["b"])}

    communities = asyn_fluidc(test, 2)
    result = {frozenset(c) for c in communities}
    assert result == ground_truth


def test_two_clique_communities():
    test = Graph()

    # c1
    test.add_edge("a", "b")
    test.add_edge("a", "c")
    test.add_edge("b", "c")

    # connection
    test.add_edge("c", "d")

    # c2
    test.add_edge("d", "e")
    test.add_edge("d", "f")
    test.add_edge("f", "e")

    # ground truth
    ground_truth = {frozenset(["a", "c", "b"]), frozenset(["e", "d", "f"])}

    communities = asyn_fluidc(test, 2, seed=7)
    result = {frozenset(c) for c in communities}
    assert result == ground_truth


def test_five_clique_ring():
    test = Graph()

    # c1
    test.add_edge("1a", "1b")
    test.add_edge("1a", "1c")
    test.add_edge("1a", "1d")
    test.add_edge("1b", "1c")
    test.add_edge("1b", "1d")
    test.add_edge("1c", "1d")

    # c2
    test.add_edge("2a", "2b")
    test.add_edge("2a", "2c")
    test.add_edge("2a", "2d")
    test.add_edge("2b", "2c")
    test.add_edge("2b", "2d")
    test.add_edge("2c", "2d")

    # c3
    test.add_edge("3a", "3b")
    test.add_edge("3a", "3c")
    test.add_edge("3a", "3d")
    test.add_edge("3b", "3c")
    test.add_edge("3b", "3d")
    test.add_edge("3c", "3d")

    # c4
    test.add_edge("4a", "4b")
    test.add_edge("4a", "4c")
    test.add_edge("4a", "4d")
    test.add_edge("4b", "4c")
    test.add_edge("4b", "4d")
    test.add_edge("4c", "4d")

    # c5
    test.add_edge("5a", "5b")
    test.add_edge("5a", "5c")
    test.add_edge("5a", "5d")
    test.add_edge("5b", "5c")
    test.add_edge("5b", "5d")
    test.add_edge("5c", "5d")

    # connections
    test.add_edge("1a", "2c")
    test.add_edge("2a", "3c")
    test.add_edge("3a", "4c")
    test.add_edge("4a", "5c")
    test.add_edge("5a", "1c")

    # ground truth
    ground_truth = {
        frozenset(["1a", "1b", "1c", "1d"]),
        frozenset(["2a", "2b", "2c", "2d"]),
        frozenset(["3a", "3b", "3c", "3d"]),
        frozenset(["4a", "4b", "4c", "4d"]),
        frozenset(["5a", "5b", "5c", "5d"]),
    }

    communities = asyn_fluidc(test, 5, seed=9)
    result = {frozenset(c) for c in communities}
    assert result == ground_truth