Mercurial > repos > shellac > sam_consensus_v3
diff env/lib/python3.9/site-packages/galaxy/tool_util/fetcher.py @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/env/lib/python3.9/site-packages/galaxy/tool_util/fetcher.py Mon Mar 22 18:12:50 2021 +0000 @@ -0,0 +1,25 @@ +from galaxy.util import plugin_config + + +class ToolLocationFetcher: + + def __init__(self): + self.resolver_classes = self.__resolvers_dict() + + def __resolvers_dict(self): + import galaxy.tool_util.locations + return plugin_config.plugins_dict(galaxy.tool_util.locations, 'scheme') + + def to_tool_path(self, path_or_uri_like, **kwds): + if "://" not in path_or_uri_like: + path = path_or_uri_like + else: + uri_like = path_or_uri_like + if ":" not in path_or_uri_like: + raise Exception("Invalid URI passed to get_tool_source") + scheme, rest = uri_like.split(":", 2) + if scheme not in self.resolver_classes: + raise Exception(f"Unknown tool scheme [{scheme}] for URI [{uri_like}]") + path = self.resolver_classes[scheme]().get_tool_source_path(uri_like) + + return path