diff env/lib/python3.9/site-packages/planemo/commands/cmd_shed_serve.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/env/lib/python3.9/site-packages/planemo/commands/cmd_shed_serve.py	Mon Mar 22 18:12:50 2021 +0000
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+"""Module describing the planemo ``shed_serve`` command."""
+import click
+
+from planemo import io
+from planemo import options
+from planemo import shed
+from planemo.cli import command_function
+from planemo.galaxy import shed_serve
+from planemo.galaxy.serve import sleep_for_serve
+
+
+@click.command("shed_serve")
+@options.shed_read_options()
+@options.galaxy_serve_options()
+@click.option(
+    "--skip_dependencies",
+    is_flag=True,
+    help="Do not install shed dependencies as part of repository installation."
+)
+@command_function
+def cli(ctx, paths, **kwds):
+    """Launch Galaxy with Tool Shed dependencies.
+
+    This command will start a Galaxy instance configured to target the
+    specified shed, find published artifacts (tools and dependencies)
+    corresponding to command-line arguments and ``.shed.yml`` file(s),
+    install these artifacts, and serve a Galaxy instances that can be
+    logged into and explored interactively.
+    """
+    kwds['galaxy_skip_client_build'] = kwds.pop("skip_client_build", False)
+    install_args_list = shed.install_arg_lists(ctx, paths, **kwds)
+    with shed_serve(ctx, install_args_list, **kwds) as config:
+        io.info("Galaxy running with tools installed at %s" % config.galaxy_url)
+        sleep_for_serve()