Mercurial > repos > shellac > sam_consensus_v3
view env/lib/python3.9/site-packages/bioblend/_tests/TestGalaxyJobs.py @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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from . import ( GalaxyTestBase, test_util ) class TestGalaxyJobs(GalaxyTestBase.GalaxyTestBase): @test_util.skip_unless_galaxy('release_21.01') @test_util.skip_unless_tool("random_lines1") def test_run_and_rerun_random_lines(self): history_id = self.gi.histories.create_history(name="test_run_random_lines history")["id"] dataset_id = self._test_dataset(history_id, contents="line 1\nline 2\rline 3\r\nline 4") tool_inputs = { 'num_lines': '1', 'input': { 'src': 'hda', 'id': dataset_id }, 'seed_source': { 'seed_source_selector': 'set_seed', 'seed': 'asdf' } } original_output = self.gi.tools.run_tool( history_id=history_id, tool_id="random_lines1", tool_inputs=tool_inputs, input_format='21.01' ) original_job_id = original_output['jobs'][0]['id'] build_for_rerun = self.gi.jobs._build_for_rerun(original_job_id) self.assertEqual(build_for_rerun['state_inputs']['seed_source']['seed'], 'asdf') rerun_output = self.gi.jobs.rerun_job(original_job_id) rerun_output_content = self.gi.datasets.download_dataset(rerun_output['outputs'][0]['id']) original_output_content = self.gi.datasets.download_dataset(original_output['outputs'][0]['id']) self.assertEqual(rerun_output_content, original_output_content)