Mercurial > repos > shellac > sam_consensus_v3
view env/lib/python3.9/site-packages/cwltool/tests/secondary-files.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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#!/usr/bin/env cwl-runner cwlVersion: v1.1.0-dev1 requirements: - class: InlineJavascriptRequirement - class: ShellCommandRequirement class: CommandLineTool inputs: fasta_path: type: File secondaryFiles: - pattern: ^.fastq required: true - pattern: .crai required: false - .bai? - pattern: "${ return null }" outputs: bai_list: type: File outputBinding: glob: lsout secondaryFiles: - .bai? - pattern: "${ return null }" - pattern: .crai required: false - pattern: .idx baseCommand: ["ls"] stdout: lsout