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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="snippy" version="3.0">
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4 <repository changeset_revision="f8b5ebbd6121" name="package_snippy_3_0" owner="simon-gladman" toolshed="https://toolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="samtools" version="1.2">
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7 <repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
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8 </package>
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1
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9 <package name="freebayes" version="0_9_20_b040236">
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10 <repository changeset_revision="059e6e3d99cc" name="package_freebayes_0_9_20_b040236" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
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11 </package>
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12 <package name="bwa" version="0.7.12">
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13 <repository changeset_revision="6af9b24ddeee" name="package_bwa_0_7_12" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
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14 </package>
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1
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15 <package name="vcfftools" version="0.1.11">
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16 <repository changeset_revision="710efaae2ff8" name="package_vcftools_0_1_11" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
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17 </package>
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18 <package name="snpeff" version="4.0">
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19 <repository changeset_revision="792d8f4485fb" name="package_snpeff_4_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
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20 </package>
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21 </tool_dependency>
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