annotate pyPRADA_1.2/tools/bwa-0.5.7-mh/INSTALL @ 0:acc2ca1a3ba4

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author siyuan
date Thu, 20 Feb 2014 00:44:58 -0500
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1 Simply type `make' to compile and copy the resulting executable `bwa'
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2 anywhere you want. You may also like to copy `solid2fastq.pl' and
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3 `qualfa2fq.pl' for format conversion.
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4
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5 On 32-bit system, you should compile bwa with `make CFLAGS=-O2'.
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6
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7 The GNU building system is also supported, which is necessary for
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8 building Java binding. Nonetheless, directly runing `make' is
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9 recommended in most other cases.