comparison pyPRADA_1.2/tools/samtools-0.1.16/AUTHORS @ 0:acc2ca1a3ba4

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author siyuan
date Thu, 20 Feb 2014 00:44:58 -0500
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1 Heng Li from the Sanger Institute wrote most of the initial source codes
2 of SAMtools and various converters.
3
4 Bob Handsaker from the Broad Institute is a major contributor to the
5 SAM/BAM specification. He designed and implemented the BGZF format, the
6 underlying indexable compression format for the BAM format. BGZF does
7 not support arithmetic between file offsets.
8
9 Jue Ruan for the Beijing Genome Institute designed and implemented the
10 RAZF format, an alternative indexable compression format. RAZF supports
11 arithmetic between file offsets, at the cost of increased index file
12 size and the full compatibility with gzip. RAZF is optional and only
13 used in `faidx' for indexing RAZF compressed fasta files.
14
15 Colin Hercus updated novo2sam.pl to support gapped alignment by
16 novoalign.
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18 Petr Danecek contributed the header parsing library sam_header.c and
19 sam2vcf.pl script and added knet support to the RAZF library.
20