Mercurial > repos > smarthey > paqmir_mirdeep2_mapper

annotate paqmir_mapper/test-data/cel_cluster.fa @ 0:2e4a523f5bc5 draft default tip

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Uploaded
author smarthey
date Mon, 18 Mar 2019 09:17:49 -0400
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0
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1 >chrII:11534525-11540624
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2 tccaaaatattagaggccccacgaaaaggggagcagaacgaaaaggggat
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3 ctgcaaaaaggggatctgcgaaaaggggagatacgaaaaggggagatacg
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4 aaaaggggagcaacgaaaaggggatctggcactgtgccaaacgctatttt
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5 tctcaaagaaaacaatacaacgatgctccgatgttacgcgtcgcgtgttg
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diff changeset
6 ttaagcgtatcttctagaagaaaatttcaaaaatcaacgtgcgttgcgtg
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diff changeset
7 agaaaaattgcgttttgtgcgtttggcacagtgccagctccccttttcgt
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diff changeset
8 tgctccccttttcgtatctccccttttcgtatctccccttttcgcagatc
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diff changeset
9 ccctttttgcagatccccttttcgttctgctcccctcgtggggcctcaaa
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diff changeset
10 taatattgtcaatggagcgcagttgcgcacaccgaaatacgcacgaaatt
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11 tgaaattggcaggcctagaaagtctggatttaaaatatttatgcatatta
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diff changeset
12 acctgagtttcggcatgtttagataaatttagattaaaatttattaaata
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13 aaaatatttaaaatttattaaattcaacattatctttaattttacagaaa
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14 taaaaaccaaaaaaccaacgaagtgtaacttttcgacaataaatatttat
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diff changeset
15 aaattattcaattaattggaaatctatttatcacatctcatcgtgaacaa
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16 gcacatggctaaacaatgcctcgactttatccacccatcctggatttttc
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17 ctgttgaaaatcttcaaatccttcatagtctgctcaattgccttaacagc
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18 cttttcccttttcacatccttcgtcaattcctcaaccatcgcctctacaa
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19 gttgtgatcgtgaggccccttcaacgaatttcttgtccaatacatctctg
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20 agctgaaaaataagtccctttattcatgtgcaccacctgccactcattca
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21 ttttagatcctaatcctgtatttctctctctctctcactaatcgtcccgt
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22 catatctgacccactataatgaggggaccaccactttgccccagatttcg
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23 taatgagccaacatacactaggccctgttctagcacccccattgtgcatg
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24 ggagacacatcgtctgttggttcgggtcagctgagatgacgtggcagatg
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25 acgtcatgtttgttctctagcagatccctatcgtaaaataccgttctttg
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26 ttcgtttatgagcacttcttgggaaacaagaagaatattagagaatattg
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27 gattttaggaaatttcttgaccctaataatatgtatctcatggggctaat
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28 tacgaaagatttagagctcactaaagcagatgtggataagctggaactat
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29 agtcaattctcacgagatattattattagcttactcgttgaatttgatgc
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30 cgtgttaggtagaagccgagaacacgatgaaccttggaagttatgtagtc
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31 gagttttctggaagaaaaagtatatatagtttgataaaaagttacgtcat
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32 aagttattggtcccgagtgtgtacactagaaacttgcgcaatcagttggt
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33 caggtggtctaggacctttacatgtaatataattcattggtttgttgctc
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34 tagatctcaaagaatatggttttcctgctgagaaacaaaatttttttttc
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35 aaatgttcgcgatattatacgatttttttgcgctgaaaaatacggtatcc
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36 ggactcgacacgacagtttttcaataaattcggaaaggtacatatgcgcc
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37 tttgaagagtactgtaattttaaacatttgttgatgcagtaaatattctc
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38 acggatttttagaggtttttttttgaatatttatacagttatattagagt
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39 taaaaaaataaatctatttttatcgaaatttatgaaaaatctactcccca
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40 gaaacaaagtttgaatttacttaaaatgtatgtgcgcctttttaaattca
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41 acaaaaatttatcaaattttgtctttttaatcacttttacttttttttcg
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42 aaaaaaaaaaaaactttaaaaacaccgaaaattaaaatttttaattaccg
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43 taatcctttaaaggcgcacacctctttttcgcaatcataaaaatttacag
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44 gcacagaatttcctactgtaacgtgttttctcgatagaaacgtttctcca
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45 aatcgaaatttttattagcaatcatcaattcgtcatgtttctgtgctgga
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46 gcacattgttatgcagtgctcatgaatattcacagttgaaaatcgaattt
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47 ttttttcttatttttattaacttctctcctcactcaagtgcaatctcatt
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48 tcggcggaacgatgaaagcggactcgtttgaaacggattacactgctggc
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49 tggctccatcttttttatttctggtttttttcccgacacgggaggtcatc
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50 cgtccacgtcttcaatcttattcgcttctccttctatctatctctcttcc
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51 aaaaaaatggaacagattgtccgccttctactttccgcatgcgcctattc
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52 tagacatcgagaagaagcgagagaatccgaaaaactccgccgtccggcgc
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53 ctagcgttcatcccgtcgcatccaatttccttcacccctgtctccagtct
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54 ctaatctgtgtttcccagaccttctccttcttcttctcccctctttcttc
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55 cctttcttttctacgattcctagacctgcccggttgaccatcgggcccac
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56 catttatcgagcgcgtccgtctgttcgttgctgtgagcgcgcgcgcgcga
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57 gcgcacactgcacaccatttgaccgcaacgagccgagagagtgtgtgaaa
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58 tgaagagacgccgagtggacacgttgctctacaccaaacgcgctacacca
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59 aatgggcggagacccaatggtgcaccaagtcagcagtataaaaggaatgg
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60 aaatggtccattcagtcatcagttgtttttttattttctcttttctccca
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61 tcactttctcccttcttcccctctcctaatttccattcccaactattatt
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62 ctcggatcagatcgagccattgctggtttcttccacagtggtactttcca
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63 ttagaactatcaccgggtggaaactagcagtggctcgatcttttccactt
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64 gctccaccgctgtcggggaaccgcgccaattttcgcttcagtgctagacc
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65 atccaaagtgtctatcaccgggtgaaaattcgcatgggtccccgacgcgg
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66 aaagataaaatatcttaaaatcgattctagaaacccttggaccagtgtgg
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67 gtgtccgttgcggtgctacattctctaatctgtatcaccgggtgaacact
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68 tgcagtggtcctcgtggtttctctgtgagccaggtcctgttccggttttt
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69 tccgtggtgataacgcatccaaaagtctctatcaccgggagaaaaactgg
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70 agtaggacctgtgactcattccgatttctggagttttcccctacattcta
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71 ccattcagctactgattattgaattcctgatataccgagagcccagctga
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72 tttcgtcttggtaataagctcgtcattgagattatcaccgggtgtaaatc
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73 agcttggctctggtgtctccgaacctcctgtccgcacctcagtggatgta
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74 tgccatgatgataagatatcagaaatcctatcaccgggtgtacatcagct
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75 aaggtgcgggtacaggtgcatttgatatcaaggtgagttatttttaagtg
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76 ggtcccagagaccttggtggtttttctctgcagtgatagatacttctaac
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77 aactcgctatcaccgggtgaaaaatcacctaggtctggagcctcctgctc
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78 tttttttgctgtttttaaacttaaacttaaaactaacactttatcaaaat
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79 aaagtcttccaaaatcttttttctgatctgccggaagactttccatgaat
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80 ttgtccaaaactcgttgcactttatcctcgtcgtaatcatttgacaccat
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81 atctttggataactagaataattgaacattggtttaaaaaaattctctca
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82 aaaaaaaaatcacaaacctgatgaattttagcctcatctatagcagtatc
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83 tgcgagaagaatcgtaagattcattgataattctatatattttccaataa
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84 ttttatccgaagctggatgtgaagtttctacagtacctccgtggcataat
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diff changeset
85 actacaatggaagcaaaaagagcgacaattaggatcgtcattttagtgga
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86 gaatgatgaattgacccggctctttgggggttggaggattcattttcccc
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87 ttcaacaggtgctcaaataattaaagagaatagaaccgacgatatatggg
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88 tcaaatgtttatacagttgtgctactaaacgtattgttacacgcgttatt
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89 aataattagaattagaattatatcgttttgtacggattgagaatcccatt
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90 tgggtcgaaaatgttcttgagcttctttgtcaaaagtcgttcttcaggat
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91 cttttccgaatgtggagtacggtagcttcagttgaccgattccatgttca
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92 gctgaaattgacccgccgtgatcgacaacccattcgtagaggaagggata
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93 gagcctggaatttgaaattattaatagaattaaaattttataaaaaagaa
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94 aaatctcgaaacttacaatttttcaagttcttcattgtgtttttcagatg
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95 taatatttaaatgagtgtttccatctcccaaatgtccataagtgacaatt
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96 cttttagccaaagaaccacatcgttccttcatcacattcgtcaattcata
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97 ataattttccaatggtaaagaaacatcatgcttatagacatatccatctc
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98 tggtaaccgccaatggtgcactttctctcaattgccacatcttcgtagct
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99 tctgcagaagatccagcgagcactccgtcgataatcagattttttgagag
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100 gcattcatccaaaaatgcgctcattttctccatatcgtgatcttcattgg
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101 atcctgatgtttcgacaaggatcgagaatggggttggagcattcagtact
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102 gggtgcaatcctagattcgttttcaaacattccatcgtagcatcgtcgag
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103 aagttcgaaggaggaaaggatttcagtgaggctggattttgcaagcttca
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104 gtacttcgcagcattttttgaaggattcgatgcctgaaaaaaattagaaa
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105 ttgaaaaatttgaacccattatataaatattcaacctaccaagcatcgca
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106 ctttgtacacttttcggtttaggaaccgcagtcattgtgacgcttgtgat
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107 aacacccaactgcccttcacttcccaagaataggtgtggagtgtgcaaag
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108 ttgtgttgtccttccgaatgcttgatcccaaatgtagaacagttccatgt
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109 tcatcgggaagaaccaccgtgagcccgagaagatgtgcgtgaagacttcc
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110 gtatcgaatcaaccgaatccctcctgcacacgtggcaatatttcctccaa
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111 tctgacaggatcctttggctccgagatcaaaaggcatcatatatccgagt
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112 tttgcaagtttgttgtccaagtcttccagaataaaaccagaatcacactt
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113 gagaattcccattgtgtcgtcgaaagagaattgcttgttgattttattca
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114 ttgatataacaacttcatcatgtactggaattgatccaccaacgagtcct
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115 gtattccctccttgtgggactactgccaatttgttcttggagcaatacgc
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116 caatattgcagaaacctcttcggtgctcttcgggtagaggacgacactgc
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117 caggacctggaaattaaaacatttaatatttaaagtacctatttaatatt
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118 aaataaacctaatcttaaaatacaaatacctttaaattggcctgtccaat
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119 ctgtagtatgatttgtaatatcgtccttcttcactgcatcttgcccgaga
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120 aaattctcaaatgccattaaatccgactgcatcacttttgcaaatccttc
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121 atgtctggcggcaagaactgctgcgtagcttctagttggtcttctgattc
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122 gtggcaagattttcagaaacatctgaattcagaaacttttcaaaaaataa
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123 cttgaaacttcaaaagaaatagtaggagacaaagctcggctaggtgaccg
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124
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125 >chrIII:2172325-2172669
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126 CAGGCAGTCAGTCAGTCTCTCTCCACTCACATTCAGTCAGTCAGTGACCA
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127 TCACCAGGTTGTGTGTGAGCCCCTTCCATTATTCTTCTGAACCCCCCTCC
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128 CAACGCGGGAAGACTCGCCGGCAATGACACTGGTTATCTTTTCCATCGTG
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129 GAATGCCCCCCATTGATTTTTTCCCCTTTTCGGGGGGAAAAAATTGGAAA
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130 CGAGAAAGGTATCGGGTGTCATAGCCGGCGTGATCATCTTCCTCAAGTAT
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131 TCCTCTGCTGATTTCGATATTCGGAGGAGCTCGGAGGCTGTTCAGCTGTA
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132 AAATTGGTTGATTAAGCTCAAAAATCGGCGTTAACGCGGCTTTCC